RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 NUF2Q9BZD4 464 aa17.08■□□□□ 0.32
PKP4-204ENST00000421462 C17orf75Q9HAS0 396 aa17.08■□□□□ 0.32
PKP4-204ENST00000421462 TCF7L2Q9NQB0 619 aa17.08■□□□□ 0.32
PKP4-204ENST00000421462 C20orf96Q9NUD7 363 aaPredicted RBP17.08■□□□□ 0.32
PKP4-204ENST00000421462 ASNSD1Q9NWL6 643 aa17.08■□□□□ 0.32
PKP4-204ENST00000421462 RRN3Q9NYV6 651 aa17.08■□□□□ 0.32
PKP4-204ENST00000421462 COPG2Q9UBF2 871 aa17.08■□□□□ 0.32
PKP4-204ENST00000421462 RSL24D1Q9UHA3 163 aaKnown RBP17.08■□□□□ 0.32
PKP4-204ENST00000421462 CNTN6Q9UQ52 1028 aa17.08■□□□□ 0.32
PKP4-204ENST00000421462 CEPT1Q9Y6K0 416 aa17.08■□□□□ 0.32
PKP4-204ENST00000421462 LOXHD1Q8IVV2 1947 aa17.08■□□□□ 0.32
PKP4-204ENST00000421462 TMX2-CTNND1H3BSU7 103 aa17.07■□□□□ 0.32
PKP4-204ENST00000421462 APOL1O14791 398 aa17.07■□□□□ 0.32
PKP4-204ENST00000421462 COQ9O75208 318 aa17.07■□□□□ 0.32
PKP4-204ENST00000421462 TGFB2P61812 414 aa17.07■□□□□ 0.32
PKP4-204ENST00000421462 GBE1Q04446 702 aa17.07■□□□□ 0.32
PKP4-204ENST00000421462 UBR7Q8N806 425 aa17.07■□□□□ 0.32
PKP4-204ENST00000421462 KYQ8NBH2 561 aa17.07■□□□□ 0.32
PKP4-204ENST00000421462 ATP6V1E2Q96A05 226 aa17.07■□□□□ 0.32
PKP4-204ENST00000421462 TWNKQ96RR1 684 aa17.07■□□□□ 0.32
PKP4-204ENST00000421462 SERPINI1Q99574 410 aa17.07■□□□□ 0.32
PKP4-204ENST00000421462 SLC4A5Q9BY07 1137 aa17.07■□□□□ 0.32
PKP4-204ENST00000421462 TRPV6Q9H1D0 765 aa17.07■□□□□ 0.32
PKP4-204ENST00000421462 PXMP2Q9NR77 195 aa17.07■□□□□ 0.32
PKP4-204ENST00000421462 PCDHGA4Q9Y5G9 962 aa17.07■□□□□ 0.32
PKP4-204ENST00000421462 FAM159BA6NKW6 160 aa17.07■□□□□ 0.32
PKP4-204ENST00000421462 THRAP10827 490 aa17.07■□□□□ 0.32
PKP4-204ENST00000421462 PIK3R1P27986 724 aa17.07■□□□□ 0.32
PKP4-204ENST00000421462 ANKRD23Q86SG2 305 aa17.07■□□□□ 0.32
PKP4-204ENST00000421462 FRMD8P1Q9BZ68 369 aaPredicted RBP17.07■□□□□ 0.32
PKP4-204ENST00000421462 TIMMDC1Q9NPL8 285 aa17.07■□□□□ 0.32
PKP4-204ENST00000421462 STK39Q9UEW8 545 aa17.07■□□□□ 0.32
PKP4-204ENST00000421462 RAB26Q9ULW5 256 aa17.07■□□□□ 0.32
PKP4-204ENST00000421462 AP1G1O43747 822 aa17.07■□□□□ 0.32
PKP4-204ENST00000421462 PIM1P11309 404 aaPredicted RBP17.07■□□□□ 0.32
PKP4-204ENST00000421462 MGAT1P26572 445 aa17.07■□□□□ 0.32
PKP4-204ENST00000421462 ETFBP38117 255 aa17.07■□□□□ 0.32
PKP4-204ENST00000421462 MAPK10P53779 464 aa17.07■□□□□ 0.32
PKP4-204ENST00000421462 CEACAM7Q14002 265 aa17.07■□□□□ 0.32
PKP4-204ENST00000421462 STRIP1Q5VSL9 837 aa17.07■□□□□ 0.32
PKP4-204ENST00000421462 PACS1Q6VY07 963 aa17.07■□□□□ 0.32
PKP4-204ENST00000421462 AHI1Q8N157 1196 aa17.07■□□□□ 0.32
PKP4-204ENST00000421462 PCDH20Q8N6Y1 951 aaKnown RBP17.07■□□□□ 0.32
PKP4-204ENST00000421462 TDRD5Q8NAT2 981 aaKnown RBP17.07■□□□□ 0.32
PKP4-204ENST00000421462 HEXIM2Q96MH2 286 aaKnown RBP17.07■□□□□ 0.32
PKP4-204ENST00000421462 NPAS2Q99743 824 aa17.07■□□□□ 0.32
PKP4-204ENST00000421462 TMEM79Q9BSE2 394 aa17.07■□□□□ 0.32
PKP4-204ENST00000421462 ZNF518BQ9C0D4 1074 aa17.07■□□□□ 0.32
PKP4-204ENST00000421462 CIDEBQ9UHD4 219 aa17.07■□□□□ 0.32
PKP4-204ENST00000421462 ARHGEF37A1IGU5 675 aa17.06■□□□□ 0.32
PKP4-204ENST00000421462 PSAPP07602 524 aa17.06■□□□□ 0.32
PKP4-204ENST00000421462 NR3C2P08235 984 aa17.06■□□□□ 0.32
PKP4-204ENST00000421462 MPSTP25325 297 aa17.06■□□□□ 0.32
PKP4-204ENST00000421462 SERPINB9P50453 376 aa17.06■□□□□ 0.32
PKP4-204ENST00000421462 ACTR2P61160 394 aa17.06■□□□□ 0.32
PKP4-204ENST00000421462 SLFN12LQ6IEE8 588 aa17.06■□□□□ 0.32
PKP4-204ENST00000421462 CYP2R1Q6VVX0 501 aa17.06■□□□□ 0.32
PKP4-204ENST00000421462 SNX31Q8N9S9 440 aa17.06■□□□□ 0.32
PKP4-204ENST00000421462 PPWD1Q96BP3 646 aaKnown RBP17.06■□□□□ 0.32
PKP4-204ENST00000421462 KLHL32Q96NJ5 620 aa17.06■□□□□ 0.32
PKP4-204ENST00000421462 PCDHAC1Q9H158 963 aa17.06■□□□□ 0.32
PKP4-204ENST00000421462 PFDN4Q9NQP4 134 aa17.06■□□□□ 0.32
PKP4-204ENST00000421462 EPS15L1Q9UBC2 864 aa17.06■□□□□ 0.32
PKP4-204ENST00000421462 CLEC11AQ9Y240 323 aa17.06■□□□□ 0.32
PKP4-204ENST00000421462 HES2Q9Y543 173 aa17.06■□□□□ 0.32
PKP4-204ENST00000421462 RNASEH2AO75792 299 aaKnown RBP17.06■□□□□ 0.32
PKP4-204ENST00000421462 LDHAP00338 332 aaKnown RBP17.06■□□□□ 0.32
PKP4-204ENST00000421462 DUOXA2Q1HG44 320 aa17.06■□□□□ 0.32
PKP4-204ENST00000421462 IL23RQ5VWK5 629 aa17.06■□□□□ 0.32
PKP4-204ENST00000421462 SLC9A4Q6AI14 798 aa17.06■□□□□ 0.32
PKP4-204ENST00000421462 TRNP1Q6NT89 227 aa17.06■□□□□ 0.32
PKP4-204ENST00000421462 CLVS1Q8IUQ0 354 aaPredicted RBP17.06■□□□□ 0.32
PKP4-204ENST00000421462 RNF169Q8NCN4 708 aa17.06■□□□□ 0.32
PKP4-204ENST00000421462 PCDH19Q8TAB3 1148 aa17.06■□□□□ 0.32
PKP4-204ENST00000421462 GIPC3Q8TF64 312 aa17.06■□□□□ 0.32
PKP4-204ENST00000421462 JPH1Q9HDC5 661 aaPredicted RBP17.06■□□□□ 0.32
PKP4-204ENST00000421462 RIPK3Q9Y572 518 aa17.06■□□□□ 0.32
PKP4-204ENST00000421462 PCDHA11Q9Y5I1 949 aa17.06■□□□□ 0.32
PKP4-204ENST00000421462 SNX13Q9Y5W8 968 aa17.06■□□□□ 0.32
PKP4-204ENST00000421462 GOLGA8TH3BQL2 631 aa17.05■□□□□ 0.32
PKP4-204ENST00000421462 ZNF195O14628 629 aa17.05■□□□□ 0.32
PKP4-204ENST00000421462 XPOTO43592 962 aaKnown RBP17.05■□□□□ 0.32
PKP4-204ENST00000421462 GLRBP48167 497 aa17.05■□□□□ 0.32
PKP4-204ENST00000421462 Q3C1V9 767 aa17.05■□□□□ 0.32
PKP4-204ENST00000421462 ZNF534Q76KX8 674 aa17.05■□□□□ 0.32
PKP4-204ENST00000421462 NIPA1Q7RTP0 329 aa17.05■□□□□ 0.32
PKP4-204ENST00000421462 CDKL2Q92772 493 aa17.05■□□□□ 0.32
PKP4-204ENST00000421462 WNK4Q96J92 1243 aa17.05■□□□□ 0.32
PKP4-204ENST00000421462 RTKNQ9BST9 563 aa17.05■□□□□ 0.32
PKP4-204ENST00000421462 COQ10BQ9H8M1 238 aa17.05■□□□□ 0.32
PKP4-204ENST00000421462 DNAJC28Q9NX36 388 aa17.05■□□□□ 0.32
PKP4-204ENST00000421462 RIMS3Q9UJD0 308 aa17.05■□□□□ 0.32
PKP4-204ENST00000421462 MFHAS1Q9Y4C4 1052 aa17.05■□□□□ 0.32
PKP4-204ENST00000421462 USP12O75317 370 aa17.05■□□□□ 0.32
PKP4-204ENST00000421462 ATXN1P54253 815 aaKnown RBP17.05■□□□□ 0.32
PKP4-204ENST00000421462 IRF9Q00978 393 aa17.05■□□□□ 0.32
PKP4-204ENST00000421462 STILQ15468 1287 aa17.05■□□□□ 0.32
PKP4-204ENST00000421462 SLC7A3Q8WY07 619 aa17.05■□□□□ 0.32
PKP4-204ENST00000421462 PAIP2BQ9ULR5 123 aaKnown RBP17.05■□□□□ 0.32
PKP4-204ENST00000421462 SH3GLB1Q9Y371 365 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms