RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 DCTP40126 519 aa9.43□□□□□ -0.9
TRIM39-206ENST00000420746 ADPRHP54922 357 aa9.43□□□□□ -0.9
TRIM39-206ENST00000420746 POLE2P56282 527 aa9.43□□□□□ -0.9
TRIM39-206ENST00000420746 SRSF6Q13247 344 aaKnown RBP9.43□□□□□ -0.9
TRIM39-206ENST00000420746 TGIF1Q15583 401 aa9.43□□□□□ -0.9
TRIM39-206ENST00000420746 CST6Q15828 149 aa9.43□□□□□ -0.9
TRIM39-206ENST00000420746 ARSHQ5FYA8 562 aa9.43□□□□□ -0.9
TRIM39-206ENST00000420746 TTC38Q5R3I4 469 aa9.43□□□□□ -0.9
TRIM39-206ENST00000420746 SCARA3Q6AZY7 606 aa9.43□□□□□ -0.9
TRIM39-206ENST00000420746 ZNF787Q6DD87 383 aa9.43□□□□□ -0.9
TRIM39-206ENST00000420746 FOXR1Q6PIV2 292 aa9.43□□□□□ -0.9
TRIM39-206ENST00000420746 SND1Q7KZF4 910 aaKnown RBP eCLIP9.43□□□□□ -0.9
TRIM39-206ENST00000420746 KIAA0907Q7Z7F0 614 aaPredicted RBP9.43□□□□□ -0.9
TRIM39-206ENST00000420746 PRPF39Q86UA1 669 aaKnown RBP9.43□□□□□ -0.9
TRIM39-206ENST00000420746 FAM217AQ8IXS0 508 aa9.43□□□□□ -0.9
TRIM39-206ENST00000420746 AHI1Q8N157 1196 aa9.43□□□□□ -0.9
TRIM39-206ENST00000420746 MYCT1Q8N699 235 aa9.43□□□□□ -0.9
TRIM39-206ENST00000420746 ZNF366Q8N895 744 aa9.43□□□□□ -0.9
TRIM39-206ENST00000420746 B3GALNT2Q8NCR0 500 aa9.43□□□□□ -0.9
TRIM39-206ENST00000420746 OR6B3Q8NGW1 331 aa9.43□□□□□ -0.9
TRIM39-206ENST00000420746 HVCN1Q96D96 273 aa9.43□□□□□ -0.9
TRIM39-206ENST00000420746 IFT43Q96FT9 208 aa9.43□□□□□ -0.9
TRIM39-206ENST00000420746 SMARCD1Q96GM5 515 aa9.43□□□□□ -0.9
TRIM39-206ENST00000420746 REEP2Q9BRK0 252 aa9.43□□□□□ -0.9
TRIM39-206ENST00000420746 LARP6Q9BRS8 491 aaKnown RBP9.43□□□□□ -0.9
TRIM39-206ENST00000420746 MTMR12Q9C0I1 747 aa9.43□□□□□ -0.9
TRIM39-206ENST00000420746 UCKL1Q9NWZ5 548 aa9.43□□□□□ -0.9
TRIM39-206ENST00000420746 RBAKQ9NYW8 714 aaPredicted RBP9.43□□□□□ -0.9
TRIM39-206ENST00000420746 ARHGAP20Q9P2F6 1191 aa9.43□□□□□ -0.9
TRIM39-206ENST00000420746 CLEC4EQ9ULY5 219 aa9.43□□□□□ -0.9
TRIM39-206ENST00000420746 NME7Q9Y5B8 376 aa9.43□□□□□ -0.9
TRIM39-206ENST00000420746 ADGRG4Q8IZF6 3080 aa9.43□□□□□ -0.9
TRIM39-206ENST00000420746 MYH11P35749 1972 aa9.43□□□□□ -0.9
TRIM39-206ENST00000420746 SPENQ96T58 3664 aaKnown RBP9.42□□□□□ -0.9
TRIM39-206ENST00000420746 UBE4BO95155 1302 aa9.42□□□□□ -0.9
TRIM39-206ENST00000420746 CELSR1Q9NYQ6 3014 aa9.42□□□□□ -0.9
TRIM39-206ENST00000420746 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.42□□□□□ -0.9
TRIM39-206ENST00000420746 NPHP3-ACAD11A0A0J9YXS1 232 aa9.42□□□□□ -0.9
TRIM39-206ENST00000420746 PP2D1A8MPX8 630 aa9.42□□□□□ -0.9
TRIM39-206ENST00000420746 CLDN5O00501 218 aa9.42□□□□□ -0.9
TRIM39-206ENST00000420746 SCAMP1O15126 338 aa9.42□□□□□ -0.9
TRIM39-206ENST00000420746 FFAR2O15552 330 aa9.42□□□□□ -0.9
TRIM39-206ENST00000420746 RNGTTO60942 597 aaKnown RBP9.42□□□□□ -0.9
TRIM39-206ENST00000420746 FAM13AO94988 1023 aa9.42□□□□□ -0.9
TRIM39-206ENST00000420746 DDAH2O95865 285 aa9.42□□□□□ -0.9
TRIM39-206ENST00000420746 HLA-FP30511 346 aa9.42□□□□□ -0.9
TRIM39-206ENST00000420746 PRPHP41219 470 aa9.42□□□□□ -0.9
TRIM39-206ENST00000420746 PGFP49763 221 aa9.42□□□□□ -0.9
TRIM39-206ENST00000420746 PDX1P52945 283 aa9.42□□□□□ -0.9
TRIM39-206ENST00000420746 ZNF445P59923 1031 aa9.42□□□□□ -0.9
TRIM39-206ENST00000420746 COG7P83436 770 aa9.42□□□□□ -0.9
TRIM39-206ENST00000420746 ZNF177Q13360 481 aaPredicted RBP9.42□□□□□ -0.9
TRIM39-206ENST00000420746 STAT4Q14765 748 aa9.42□□□□□ -0.9
TRIM39-206ENST00000420746 ARID5BQ14865 1188 aa9.42□□□□□ -0.9
TRIM39-206ENST00000420746 ZCCHC8Q6NZY4 707 aaKnown RBP9.42□□□□□ -0.9
TRIM39-206ENST00000420746 CHST9Q7L1S5 443 aa9.42□□□□□ -0.9
TRIM39-206ENST00000420746 DYMQ7RTS9 669 aa9.42□□□□□ -0.9
TRIM39-206ENST00000420746 FAM35AQ86V20 835 aa9.42□□□□□ -0.9
TRIM39-206ENST00000420746 ADIPOR2Q86V24 386 aa9.42□□□□□ -0.9
TRIM39-206ENST00000420746 DDI1Q8WTU0 396 aa9.42□□□□□ -0.9
TRIM39-206ENST00000420746 CYB5D2Q8WUJ1 264 aa9.42□□□□□ -0.9
TRIM39-206ENST00000420746 ARRDC3Q96B67 414 aa9.42□□□□□ -0.9
TRIM39-206ENST00000420746 ANKRD36BP1Q96IX9 119 aa9.42□□□□□ -0.9
TRIM39-206ENST00000420746 CDK5RAP1Q96SZ6 601 aaKnown RBP9.42□□□□□ -0.9
TRIM39-206ENST00000420746 OMDQ99983 421 aa9.42□□□□□ -0.9
TRIM39-206ENST00000420746 MRPL45Q9BRJ2 306 aaKnown RBP9.42□□□□□ -0.9
TRIM39-206ENST00000420746 FAM213AQ9BRX8 229 aa9.42□□□□□ -0.9
TRIM39-206ENST00000420746 DPEP3Q9H4B8 488 aa9.42□□□□□ -0.9
TRIM39-206ENST00000420746 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.42□□□□□ -0.9
TRIM39-206ENST00000420746 WDR70Q9NW82 654 aa9.42□□□□□ -0.9
TRIM39-206ENST00000420746 SCML2Q9UQR0 700 aa9.42□□□□□ -0.9
TRIM39-206ENST00000420746 PDZD2O15018 2839 aa9.41□□□□□ -0.9
TRIM39-206ENST00000420746 EME2A4GXA9 379 aaPredicted RBP9.41□□□□□ -0.9
TRIM39-206ENST00000420746 PRAMEF26H0Y7S4 382 aa9.41□□□□□ -0.9
TRIM39-206ENST00000420746 TMX2-CTNND1H3BSU7 103 aa9.41□□□□□ -0.9
TRIM39-206ENST00000420746 K7ESM1 405 aa9.41□□□□□ -0.9
TRIM39-206ENST00000420746 MID1O15344 667 aa9.41□□□□□ -0.9
TRIM39-206ENST00000420746 EPB41L2O43491 1005 aaKnown RBP9.41□□□□□ -0.9
TRIM39-206ENST00000420746 GOT1P17174 413 aa9.41□□□□□ -0.9
TRIM39-206ENST00000420746 PPP2CBP62714 309 aa9.41□□□□□ -0.9
TRIM39-206ENST00000420746 PPP2CAP67775 309 aa9.41□□□□□ -0.9
TRIM39-206ENST00000420746 KCNMA1Q12791 1236 aa9.41□□□□□ -0.9
TRIM39-206ENST00000420746 HNRNPA1L2Q32P51 320 aaKnown RBP9.41□□□□□ -0.9
TRIM39-206ENST00000420746 MPPE1Q53F39 396 aa9.41□□□□□ -0.9
TRIM39-206ENST00000420746 RSRC2Q7L4I2 434 aaKnown RBP9.41□□□□□ -0.9
TRIM39-206ENST00000420746 MAMDC2Q7Z304 686 aaPredicted RBP9.41□□□□□ -0.9
TRIM39-206ENST00000420746 DSG4Q86SJ6 1040 aa9.41□□□□□ -0.9
TRIM39-206ENST00000420746 TRIM69Q86WT6 500 aa9.41□□□□□ -0.9
TRIM39-206ENST00000420746 FBXO39Q8N4B4 442 aa9.41□□□□□ -0.9
TRIM39-206ENST00000420746 KDM1BQ8NB78 822 aa9.41□□□□□ -0.9
TRIM39-206ENST00000420746 OR14C36Q8NHC7 312 aa9.41□□□□□ -0.9
TRIM39-206ENST00000420746 FAM131CQ96AQ9 280 aa9.41□□□□□ -0.9
TRIM39-206ENST00000420746 MOCOSQ96EN8 888 aa9.41□□□□□ -0.9
TRIM39-206ENST00000420746 KLHDC7BQ96G42 594 aa9.41□□□□□ -0.9
TRIM39-206ENST00000420746 SRRTQ9BXP5 876 aaKnown RBP9.41□□□□□ -0.9
TRIM39-206ENST00000420746 FOXP1Q9H334 677 aaPredicted RBP9.41□□□□□ -0.9
TRIM39-206ENST00000420746 CSNK1G1Q9HCP0 422 aa9.41□□□□□ -0.9
TRIM39-206ENST00000420746 INTS13Q9NVM9 706 aa9.41□□□□□ -0.9
TRIM39-206ENST00000420746 OSER1Q9NX31 292 aa9.41□□□□□ -0.9
TRIM39-206ENST00000420746 CYTH4Q9UIA0 394 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms