RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 COG4Q9H9E3 785 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 CD209Q9NNX6 404 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 DDX4Q9NQI0 724 aaKnown RBP8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 SRP68Q9UHB9 627 aaKnown RBP8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 USP21Q9UK80 565 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 TBX20Q9UMR3 447 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 DAGLAQ9Y4D2 1042 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 A0A1W2PPW3 197 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 GIPC1O14908 333 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 AQP9O43315 295 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 PABPC1P11940 636 aaKnown RBP8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 CD1EP15812 388 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 CD247P20963 164 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 OSBPP22059 807 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 KDELR1P24390 212 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 CNTFP26441 200 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 PIK3R1P27986 724 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 SERPINB5P36952 375 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 SLC10A2Q12908 348 aaPredicted RBP8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 TRPC3Q13507 836 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 CYP2A13Q16696 494 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 SMTNL2Q2TAL5 461 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 FGD3Q5JSP0 725 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 MFSD14BQ5SR56 506 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 IL23RQ5VWK5 629 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 SPOPLQ6IQ16 392 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 MAP4K3Q8IVH8 894 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 C10orf107Q8IVU9 208 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 MYO1HQ8N1T3 1032 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 ZNF516Q92618 1163 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 CXorf21Q9HAI6 301 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 PCDHB4Q9Y5E5 795 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 TRIM64A6NGJ6 449 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 SLC15A5A6NIM6 579 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 ENTPD3O75355 529 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 KRT7P08729 469 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 TTKP33981 857 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 NR1D2Q14995 579 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 ABCB5Q2M3G0 1257 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 TMEM214Q6NUQ4 689 aaKnown RBP8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 TRMT10BQ6PF06 316 aaKnown RBP8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 UNC5AQ6ZN44 842 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 MIER3Q7Z3K6 550 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 CAND1Q86VP6 1230 aaKnown RBP8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 TERB1Q8NA31 727 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 RP9Q8TA86 221 aaKnown RBP8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 SPATA18Q8TC71 538 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 TANKQ92844 425 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 ATP2A3Q93084 1043 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 EFHD2Q96C19 240 aaPredicted RBP8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 NACA2Q9H009 215 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 SLC9A2Q9UBY0 812 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 CCPG1Q9ULG6 757 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 CDY2AQ9Y6F7 541 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 CDY1Q9Y6F8 540 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 CNTNAP2Q9UHC6 1331 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 PLOD2O00469 737 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 MCF2P10911 925 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 CUL2Q13617 745 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 SLC9B1Q4ZJI4 515 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 AARS2Q5JTZ9 985 aaKnown RBP8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 KCNT1Q5JUK3 1230 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 PPM1LQ5SGD2 360 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 ANKRD26P1Q6NSI1 321 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 MAMDC4Q6UXC1 1216 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 SLC7A5P1Q8MH63 180 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 RNF148Q8N7C7 305 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 FAM47BQ8NA70 645 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 LRRC39Q96DD0 335 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 CCDC17Q96LX7 622 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 RAB6BQ9NRW1 208 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 IPO11Q9UI26 975 aaKnown RBP8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 CNTN6Q9UQ52 1028 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 SLC30A1Q9Y6M5 507 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 FER1L6Q2WGJ9 1857 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 CFAP99D6REC4 459 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 J3QRK9 145 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 GNPATO15228 680 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 HTRA2O43464 458 aaPredicted RBP8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 ERBB2P04626 1255 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 ARP10275 920 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 IL1R2P27930 398 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 DPP6P42658 865 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 NEK2P51955 445 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 ATXN3P54252 364 aaPredicted RBP8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 ROR1Q01973 937 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 CNTN2Q02246 1040 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 GALNT2Q10471 571 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 BNIP3Q12983 259 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 SLC39A4Q6P5W5 647 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 ATP6V1E2Q96A05 226 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 FBXL8Q96CD0 374 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 NPLQ9BXD5 320 aaPredicted RBP8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 SEMA6AQ9H2E6 1030 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 WDR41Q9HAD4 459 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 PCDHB12Q9Y5F1 795 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 CORINQ9Y5Q5 1042 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 KRBA1A5PL33 1030 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 NDUFB5O43674 189 aa8.22□□□□□ -1.09
HMGXB4-202ENST00000418170 HLA-DRAP01903 254 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms