RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 EPHB6O15197 1021 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 SEC22BO75396 215 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 ALADP13716 330 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 TALDO1P37837 337 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 EFEMP1Q12805 493 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 PRKAA1Q13131 559 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 ZNF177Q13360 481 aaPredicted RBP12.3□□□□□ -0.44
UBR4-205ENST00000417040 DPYSL3Q14195 570 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 SNX17Q15036 470 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 FAM45BPQ6NSW5 357 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 ZCCHC9Q8N567 271 aaKnown RBP12.3□□□□□ -0.44
UBR4-205ENST00000417040 CPNE1Q99829 537 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 ACSS2Q9NR19 701 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 EFCAB10A6NFE3 127 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 F8VP50 259 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 VAPBO95292 243 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 NTSR2O95665 410 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 TPBGLP0DKB5 382 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 MAGP20916 626 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 RBL1P28749 1068 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 RGS21Q2M5E4 152 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 USP39Q53GS9 565 aaKnown RBP12.3□□□□□ -0.44
UBR4-205ENST00000417040 FGD3Q5JSP0 725 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 TDRD10Q5VZ19 366 aaKnown RBP12.3□□□□□ -0.44
UBR4-205ENST00000417040 MPZL3Q6UWV2 235 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 TMC7Q7Z402 723 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 AMIGO2Q86SJ2 522 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 ZNF276Q8N554 614 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 LENG1Q96BZ8 264 aaPredicted RBP12.3□□□□□ -0.44
UBR4-205ENST00000417040 MBOAT7Q96N66 472 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 SEMA4BQ9NPR2 832 aaPredicted RBP12.3□□□□□ -0.44
UBR4-205ENST00000417040 LYPLA1O75608 230 aaPredicted RBP12.3□□□□□ -0.44
UBR4-205ENST00000417040 PIGNO95427 931 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 ERCC2P18074 760 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 NT5DC1Q5TFE4 455 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 CYP4Z1Q86W10 505 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 CCNJLQ8IV13 435 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 YAF2Q8IY57 180 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 CNPY3Q9BT09 278 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 SLCO1B3Q9NPD5 702 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 ADAM30Q9UKF2 790 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 COG5Q9UP83 839 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 H3BN98 237 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 C1DQ13901 141 aaKnown RBP12.3□□□□□ -0.44
UBR4-205ENST00000417040 SEC23AQ15436 765 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 MFSD14CQ5VZR4 134 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 RNF43Q68DV7 783 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 ERO1BQ86YB8 467 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 SLC22A9Q8IVM8 553 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 KAZALD1Q96I82 304 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 KLHL31Q9H511 634 aa12.3□□□□□ -0.44
UBR4-205ENST00000417040 OGTO15294 1046 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 FMO4P31512 558 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 MARCKSL1P49006 195 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 CCT3P49368 545 aaKnown RBP12.29□□□□□ -0.44
UBR4-205ENST00000417040 PGM2Q96G03 612 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 VMP1Q96GC9 406 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 ERAP1Q9NZ08 941 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 GGA3Q9NZ52 723 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 ACAT1P24752 427 aaKnown RBP12.29□□□□□ -0.44
UBR4-205ENST00000417040 NUP62P37198 522 aaPredicted RBP12.29□□□□□ -0.44
UBR4-205ENST00000417040 SKIV2L2P42285 1042 aaKnown RBP12.29□□□□□ -0.44
UBR4-205ENST00000417040 CARTPTQ16568 116 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 SVOPQ8N4V2 548 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 OSCP1Q8WVF1 389 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 HPS1Q92902 700 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 C9orf16Q9BUW7 83 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 A1CFQ9NQ94 594 aaKnown RBP12.29□□□□□ -0.44
UBR4-205ENST00000417040 VPS45Q9NRW7 570 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 TOR4AQ9NXH8 423 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 SHOC2Q9UQ13 582 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 CDC42BPAQ5VT25 1732 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 KDM6AO15550 1401 aaPredicted RBP12.29□□□□□ -0.44
UBR4-205ENST00000417040 CES2O00748 559 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 CYP2B6P20813 491 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 PCSK1P29120 753 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 GRK3P35626 688 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 MAGEA10P43363 369 aaPredicted RBP12.29□□□□□ -0.44
UBR4-205ENST00000417040 ATP13A4Q4VNC1 1196 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 TMEM63BQ5T3F8 832 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 ZNF470Q6ECI4 717 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 PRR5LQ6MZQ0 368 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 LPCAT1Q8NF37 534 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 ETNPPLQ8TBG4 499 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 KAT5Q92993 513 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 TSEN34Q9BSV6 310 aaKnown RBP12.29□□□□□ -0.44
UBR4-205ENST00000417040 C1orf50Q9BV19 199 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 CLPBQ9H078 707 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 CDHR5Q9HBB8 845 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 PDGFCQ9NRA1 345 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 FBXO6Q9NRD1 293 aaPredicted RBP12.29□□□□□ -0.44
UBR4-205ENST00000417040 RGS18Q9NS28 235 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 KCNK1O00180 336 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 COX4I1P13073 169 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 CD151P48509 253 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 TKTL1P51854 596 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 MCL1Q07820 350 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 STRIP1Q5VSL9 837 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 KCNK18Q7Z418 384 aa12.29□□□□□ -0.44
UBR4-205ENST00000417040 NETO2Q8NC67 525 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms