RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 NUMBP49757 651 aa13.46□□□□□ -0.25
LINC00339-202ENST00000416769 ZNF165P49910 485 aa13.46□□□□□ -0.25
LINC00339-202ENST00000416769 TKTL1P51854 596 aa13.46□□□□□ -0.25
LINC00339-202ENST00000416769 STX17P56962 302 aa13.46□□□□□ -0.25
LINC00339-202ENST00000416769 RPS14P62263 151 aaKnown RBP13.46□□□□□ -0.25
LINC00339-202ENST00000416769 COG7P83436 770 aa13.46□□□□□ -0.25
LINC00339-202ENST00000416769 FKBP3Q00688 224 aaKnown RBP13.46□□□□□ -0.25
LINC00339-202ENST00000416769 ADAM9Q13443 819 aa13.46□□□□□ -0.25
LINC00339-202ENST00000416769 CAMK2GQ13555 558 aaPredicted RBP13.46□□□□□ -0.25
LINC00339-202ENST00000416769 GOLGA7BQ2TAP0 167 aa13.46□□□□□ -0.25
LINC00339-202ENST00000416769 FNDC3BQ53EP0 1204 aaKnown RBP13.46□□□□□ -0.25
LINC00339-202ENST00000416769 RAB41Q5JT25 222 aa13.46□□□□□ -0.25
LINC00339-202ENST00000416769 RFWD3Q6PCD5 774 aa13.46□□□□□ -0.25
LINC00339-202ENST00000416769 DHRS13Q6UX07 377 aa13.46□□□□□ -0.25
LINC00339-202ENST00000416769 CHST9Q7L1S5 443 aa13.46□□□□□ -0.25
LINC00339-202ENST00000416769 FMNL3Q8IVF7 1028 aa13.46□□□□□ -0.25
LINC00339-202ENST00000416769 CPXM2Q8N436 756 aa13.46□□□□□ -0.25
LINC00339-202ENST00000416769 UCMAQ8WVF2 138 aa13.46□□□□□ -0.25
LINC00339-202ENST00000416769 MED15Q96RN5 788 aa13.46□□□□□ -0.25
LINC00339-202ENST00000416769 NUP58Q9BVL2 599 aa13.46□□□□□ -0.25
LINC00339-202ENST00000416769 PRSS16Q9NQE7 514 aa13.46□□□□□ -0.25
LINC00339-202ENST00000416769 CISHQ9NSE2 258 aa13.46□□□□□ -0.25
LINC00339-202ENST00000416769 ANKRD6Q9Y2G4 727 aa13.46□□□□□ -0.25
LINC00339-202ENST00000416769 FRMD4BQ9Y2L6 1034 aa13.46□□□□□ -0.25
LINC00339-202ENST00000416769 NFE2L3Q9Y4A8 694 aa13.46□□□□□ -0.25
LINC00339-202ENST00000416769 PTPRQQ9UMZ3 2332 aa13.45□□□□□ -0.26
LINC00339-202ENST00000416769 DOCK9Q9BZ29 2069 aa13.45□□□□□ -0.26
LINC00339-202ENST00000416769 SMTNL1A8MU46 457 aa13.45□□□□□ -0.26
LINC00339-202ENST00000416769 PIK3R2O00459 728 aa13.45□□□□□ -0.26
LINC00339-202ENST00000416769 WNT9AO14904 365 aa13.45□□□□□ -0.26
LINC00339-202ENST00000416769 CETN3O15182 167 aa13.45□□□□□ -0.26
LINC00339-202ENST00000416769 FSBPO95073 299 aa13.45□□□□□ -0.26
LINC00339-202ENST00000416769 FGFR1OPO95684 399 aaKnown RBP13.45□□□□□ -0.26
LINC00339-202ENST00000416769 PRB1P04280 392 aa13.45□□□□□ -0.26
LINC00339-202ENST00000416769 ZNF883P0CG24 379 aa13.45□□□□□ -0.26
LINC00339-202ENST00000416769 OXTRP30559 389 aa13.45□□□□□ -0.26
LINC00339-202ENST00000416769 CD70P32970 193 aa13.45□□□□□ -0.26
LINC00339-202ENST00000416769 PSEN1P49768 467 aa13.45□□□□□ -0.26
LINC00339-202ENST00000416769 PDE4CQ08493 712 aa13.45□□□□□ -0.26
LINC00339-202ENST00000416769 TRIP4Q15650 581 aaPredicted RBP13.45□□□□□ -0.26
LINC00339-202ENST00000416769 GATAD2AQ86YP4 633 aa13.45□□□□□ -0.26
LINC00339-202ENST00000416769 FAM186BQ8IYM0 893 aa13.45□□□□□ -0.26
LINC00339-202ENST00000416769 ZNF276Q8N554 614 aa13.45□□□□□ -0.26
LINC00339-202ENST00000416769 UBA3Q8TBC4 463 aa13.45□□□□□ -0.26
LINC00339-202ENST00000416769 CEP63Q96MT8 703 aa13.45□□□□□ -0.26
LINC00339-202ENST00000416769 EBF2Q9HAK2 575 aa13.45□□□□□ -0.26
LINC00339-202ENST00000416769 ARID1BQ8NFD5 2236 aaPredicted RBP13.45□□□□□ -0.26
LINC00339-202ENST00000416769 YJEFN3A6XGL0 299 aa13.44□□□□□ -0.26
LINC00339-202ENST00000416769 E7ENQ6 273 aa13.44□□□□□ -0.26
LINC00339-202ENST00000416769 MAPK13O15264 365 aa13.44□□□□□ -0.26
LINC00339-202ENST00000416769 FLRT2O43155 660 aa13.44□□□□□ -0.26
LINC00339-202ENST00000416769 SEMA4FO95754 770 aa13.44□□□□□ -0.26
LINC00339-202ENST00000416769 ZBED1O96006 694 aa13.44□□□□□ -0.26
LINC00339-202ENST00000416769 WNT1P04628 370 aa13.44□□□□□ -0.26
LINC00339-202ENST00000416769 CYBBP04839 570 aa13.44□□□□□ -0.26
LINC00339-202ENST00000416769 IGHV4-34P06331 123 aa13.44□□□□□ -0.26
LINC00339-202ENST00000416769 SLC6A4P31645 630 aa13.44□□□□□ -0.26
LINC00339-202ENST00000416769 ADIGQ0VDE8 80 aa13.44□□□□□ -0.26
LINC00339-202ENST00000416769 EIF4HQ15056 248 aaKnown RBP13.44□□□□□ -0.26
LINC00339-202ENST00000416769 TPD52L1Q16890 204 aaPredicted RBP13.44□□□□□ -0.26
LINC00339-202ENST00000416769 TADA2BQ86TJ2 420 aa13.44□□□□□ -0.26
LINC00339-202ENST00000416769 MYO19Q96H55 970 aa13.44□□□□□ -0.26
LINC00339-202ENST00000416769 TMEM176AQ96HP8 235 aa13.44□□□□□ -0.26
LINC00339-202ENST00000416769 SLC6A18Q96N87 628 aa13.44□□□□□ -0.26
LINC00339-202ENST00000416769 SRRTQ9BXP5 876 aaKnown RBP13.44□□□□□ -0.26
LINC00339-202ENST00000416769 IMPG2Q9BZV3 1241 aa13.44□□□□□ -0.26
LINC00339-202ENST00000416769 DCLK3Q9C098 648 aa13.44□□□□□ -0.26
LINC00339-202ENST00000416769 CAAP1Q9H8G2 361 aa13.44□□□□□ -0.26
LINC00339-202ENST00000416769 TMEM8AQ9HCN3 771 aa13.44□□□□□ -0.26
LINC00339-202ENST00000416769 KIAA1522Q9P206 1035 aaPredicted RBP13.44□□□□□ -0.26
LINC00339-202ENST00000416769 GGA2Q9UJY4 613 aa13.44□□□□□ -0.26
LINC00339-202ENST00000416769 STRIP2Q9ULQ0 834 aa13.44□□□□□ -0.26
LINC00339-202ENST00000416769 ZNF510Q9Y2H8 683 aa13.44□□□□□ -0.26
LINC00339-202ENST00000416769 HELZ2Q9BYK8 2649 aaKnown RBP13.43□□□□□ -0.26
LINC00339-202ENST00000416769 FAM47DPA6NHR8 397 aa13.43□□□□□ -0.26
LINC00339-202ENST00000416769 PABPC1P11940 636 aaKnown RBP13.43□□□□□ -0.26
LINC00339-202ENST00000416769 RGS7P49802 495 aa13.43□□□□□ -0.26
LINC00339-202ENST00000416769 AFF3P51826 1226 aaKnown RBP13.43□□□□□ -0.26
LINC00339-202ENST00000416769 MYL5Q02045 173 aa13.43□□□□□ -0.26
LINC00339-202ENST00000416769 ARID5AQ03989 594 aa13.43□□□□□ -0.26
LINC00339-202ENST00000416769 DNAJC3Q13217 504 aa13.43□□□□□ -0.26
LINC00339-202ENST00000416769 IQCB1Q15051 598 aa13.43□□□□□ -0.26
LINC00339-202ENST00000416769 SHBQ15464 509 aa13.43□□□□□ -0.26
LINC00339-202ENST00000416769 CBWD6Q4V339 395 aa13.43□□□□□ -0.26
LINC00339-202ENST00000416769 CBWD3Q5JTY5 395 aa13.43□□□□□ -0.26
LINC00339-202ENST00000416769 CBWD5Q5RIA9 395 aa13.43□□□□□ -0.26
LINC00339-202ENST00000416769 MBLAC2Q68D91 279 aa13.43□□□□□ -0.26
LINC00339-202ENST00000416769 ARHGAP17Q68EM7 881 aa13.43□□□□□ -0.26
LINC00339-202ENST00000416769 PM20D1Q6GTS8 502 aa13.43□□□□□ -0.26
LINC00339-202ENST00000416769 MMS22LQ6ZRQ5 1243 aa13.43□□□□□ -0.26
LINC00339-202ENST00000416769 INTS8Q75QN2 995 aaKnown RBP13.43□□□□□ -0.26
LINC00339-202ENST00000416769 CLEC4CQ8WTT0 213 aa13.43□□□□□ -0.26
LINC00339-202ENST00000416769 PLD4Q96BZ4 506 aa13.43□□□□□ -0.26
LINC00339-202ENST00000416769 PRICKLE1Q96MT3 831 aaPredicted RBP13.43□□□□□ -0.26
LINC00339-202ENST00000416769 ZSWIM1Q9BR11 485 aa13.43□□□□□ -0.26
LINC00339-202ENST00000416769 CBX8Q9HC52 389 aa13.43□□□□□ -0.26
LINC00339-202ENST00000416769 TSPAN16Q9UKR8 245 aa13.43□□□□□ -0.26
LINC00339-202ENST00000416769 PCDHGB2Q9Y5G2 931 aa13.43□□□□□ -0.26
LINC00339-202ENST00000416769 MYLKQ15746 1914 aa13.43□□□□□ -0.26
LINC00339-202ENST00000416769 SHROOM3Q8TF72 1996 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms