RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 SCAPERQ9BY12 1400 aa4.19□□□□□ -1.74
HMGB3P23-201ENST00000414981 MAPK8IP3Q9UPT6 1336 aa4.19□□□□□ -1.74
HMGB3P23-201ENST00000414981 LAMC3Q9Y6N6 1575 aa4.19□□□□□ -1.74
HMGB3P23-201ENST00000414981 WDR62O43379 1518 aa4.18□□□□□ -1.74
HMGB3P23-201ENST00000414981 SOCS2O14508 198 aa4.18□□□□□ -1.74
HMGB3P23-201ENST00000414981 HNRNPDLO14979 420 aaKnown RBP4.18□□□□□ -1.74
HMGB3P23-201ENST00000414981 BMP15O95972 392 aa4.18□□□□□ -1.74
HMGB3P23-201ENST00000414981 IGKV2-30P06310 120 aa4.18□□□□□ -1.74
HMGB3P23-201ENST00000414981 TGFB3P10600 412 aa4.18□□□□□ -1.74
HMGB3P23-201ENST00000414981 EGR1P18146 543 aa4.18□□□□□ -1.74
HMGB3P23-201ENST00000414981 MST1P26927 711 aa4.18□□□□□ -1.74
HMGB3P23-201ENST00000414981 THBS4P35443 961 aa4.18□□□□□ -1.74
HMGB3P23-201ENST00000414981 TM4SF4P48230 202 aa4.18□□□□□ -1.74
HMGB3P23-201ENST00000414981 TERF1P54274 439 aa4.18□□□□□ -1.74
HMGB3P23-201ENST00000414981 WDR5P61964 334 aaKnown RBP4.18□□□□□ -1.74
HMGB3P23-201ENST00000414981 ID2Q02363 134 aa4.18□□□□□ -1.74
HMGB3P23-201ENST00000414981 SRSF1Q07955 248 aaKnown RBP eCLIP4.18□□□□□ -1.74
HMGB3P23-201ENST00000414981 INO80DQ53TQ3 878 aaPredicted RBP4.18□□□□□ -1.74
HMGB3P23-201ENST00000414981 TXLNBQ8N3L3 684 aa4.18□□□□□ -1.74
HMGB3P23-201ENST00000414981 GLIS1Q8NBF1 620 aa4.18□□□□□ -1.74
HMGB3P23-201ENST00000414981 AGO4Q9HCK5 861 aaKnown RBP4.18□□□□□ -1.74
HMGB3P23-201ENST00000414981 PTPRHQ9HD43 1115 aa4.18□□□□□ -1.74
HMGB3P23-201ENST00000414981 RRP7BPQ9NSQ0 103 aa4.18□□□□□ -1.74
HMGB3P23-201ENST00000414981 ABHD10Q9NUJ1 306 aa4.18□□□□□ -1.74
HMGB3P23-201ENST00000414981 TRNAU1APQ9NX07 287 aaKnown RBP4.18□□□□□ -1.74
HMGB3P23-201ENST00000414981 MTMR4Q9NYA4 1195 aa4.18□□□□□ -1.74
HMGB3P23-201ENST00000414981 RGL1Q9NZL6 768 aa4.18□□□□□ -1.74
HMGB3P23-201ENST00000414981 CA14Q9ULX7 337 aa4.18□□□□□ -1.74
HMGB3P23-201ENST00000414981 HEMK1Q9Y5R4 338 aaPredicted RBP4.18□□□□□ -1.74
HMGB3P23-201ENST00000414981 SIRT4Q9Y6E7 314 aaPredicted RBP4.18□□□□□ -1.74
HMGB3P23-201ENST00000414981 ADGBQ8N7X0 1667 aa4.18□□□□□ -1.74
HMGB3P23-201ENST00000414981 ITSN2Q9NZM3 1697 aa4.18□□□□□ -1.74
HMGB3P23-201ENST00000414981 PTPRGP23470 1445 aa4.18□□□□□ -1.74
HMGB3P23-201ENST00000414981 IQGAP2Q13576 1575 aa4.18□□□□□ -1.74
HMGB3P23-201ENST00000414981 SPATA31A5Q5VU36 1347 aa4.18□□□□□ -1.74
HMGB3P23-201ENST00000414981 SPATA31A7Q8IWB4 1347 aa4.18□□□□□ -1.74
HMGB3P23-201ENST00000414981 CENPJQ9HC77 1338 aaPredicted RBP4.18□□□□□ -1.74
HMGB3P23-201ENST00000414981 BCORL1Q5H9F3 1711 aa4.18□□□□□ -1.74
HMGB3P23-201ENST00000414981 KDM6BO15054 1643 aa4.17□□□□□ -1.74
HMGB3P23-201ENST00000414981 ZMYM2Q9UBW7 1377 aa4.17□□□□□ -1.74
HMGB3P23-201ENST00000414981 C16orf96A6NNT2 1141 aa4.17□□□□□ -1.74
HMGB3P23-201ENST00000414981 PLIN1O60240 522 aa4.17□□□□□ -1.74
HMGB3P23-201ENST00000414981 VIPP01282 170 aa4.17□□□□□ -1.74
HMGB3P23-201ENST00000414981 MATN1P21941 496 aa4.17□□□□□ -1.74
HMGB3P23-201ENST00000414981 RRM1P23921 792 aa4.17□□□□□ -1.74
HMGB3P23-201ENST00000414981 YY1P25490 414 aa4.17□□□□□ -1.74
HMGB3P23-201ENST00000414981 HOXD12P35452 270 aa4.17□□□□□ -1.74
HMGB3P23-201ENST00000414981 IGHMBP2P38935 993 aaKnown RBP4.17□□□□□ -1.74
HMGB3P23-201ENST00000414981 AK2P54819 239 aa4.17□□□□□ -1.74
HMGB3P23-201ENST00000414981 ZNF91Q05481 1191 aa4.17□□□□□ -1.74
HMGB3P23-201ENST00000414981 HDAC1Q13547 482 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P23-201ENST00000414981 RAPGEF1Q13905 1077 aa4.17□□□□□ -1.74
HMGB3P23-201ENST00000414981 RBMS2Q15434 407 aaKnown RBP4.17□□□□□ -1.74
HMGB3P23-201ENST00000414981 CNGA3Q16281 694 aa4.17□□□□□ -1.74
HMGB3P23-201ENST00000414981 SLC9C1Q4G0N8 1177 aa4.17□□□□□ -1.74
HMGB3P23-201ENST00000414981 TMEM196Q5HYL7 178 aa4.17□□□□□ -1.74
HMGB3P23-201ENST00000414981 IZUMO3Q5VZ72 239 aa4.17□□□□□ -1.74
HMGB3P23-201ENST00000414981 ACSM6Q6P461 480 aa4.17□□□□□ -1.74
HMGB3P23-201ENST00000414981 FRAT1Q92837 279 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P23-201ENST00000414981 GATA5Q9BWX5 397 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P23-201ENST00000414981 NECTIN3Q9NQS3 549 aa4.17□□□□□ -1.74
HMGB3P23-201ENST00000414981 TM7SF3Q9NS93 570 aa4.17□□□□□ -1.74
HMGB3P23-201ENST00000414981 TMEM184CQ9NVA4 438 aa4.17□□□□□ -1.74
HMGB3P23-201ENST00000414981 ARL8BQ9NVJ2 186 aa4.17□□□□□ -1.74
HMGB3P23-201ENST00000414981 AFG3L2Q9Y4W6 797 aa4.17□□□□□ -1.74
HMGB3P23-201ENST00000414981 CGNL1Q0VF96 1302 aa4.17□□□□□ -1.74
HMGB3P23-201ENST00000414981 ADCY10Q96PN6 1610 aa4.17□□□□□ -1.74
HMGB3P23-201ENST00000414981 TROQ12816 1431 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P23-201ENST00000414981 LY6G6EA0A0G2JKS1 128 aa4.16□□□□□ -1.74
HMGB3P23-201ENST00000414981 DYTNA2CJ06 578 aa4.16□□□□□ -1.74
HMGB3P23-201ENST00000414981 RRHO14718 337 aa4.16□□□□□ -1.74
HMGB3P23-201ENST00000414981 INPPL1O15357 1258 aa4.16□□□□□ -1.74
HMGB3P23-201ENST00000414981 NDST3O95803 873 aa4.16□□□□□ -1.74
HMGB3P23-201ENST00000414981 PLAUP00749 431 aa4.16□□□□□ -1.74
HMGB3P23-201ENST00000414981 KRT18P05783 430 aaKnown RBP4.16□□□□□ -1.74
HMGB3P23-201ENST00000414981 FAM200BP0CF97 657 aa4.16□□□□□ -1.74
HMGB3P23-201ENST00000414981 HARSP12081 509 aaKnown RBP4.16□□□□□ -1.74
HMGB3P23-201ENST00000414981 TNFSF4P23510 183 aa4.16□□□□□ -1.74
HMGB3P23-201ENST00000414981 EEF1GP26641 437 aaKnown RBP4.16□□□□□ -1.74
HMGB3P23-201ENST00000414981 MMP14P50281 582 aa4.16□□□□□ -1.74
HMGB3P23-201ENST00000414981 YPEL5P62699 121 aa4.16□□□□□ -1.74
HMGB3P23-201ENST00000414981 RAE1P78406 368 aaKnown RBP4.16□□□□□ -1.74
HMGB3P23-201ENST00000414981 NSUN2Q08J23 767 aaKnown RBP eCLIP4.16□□□□□ -1.74
HMGB3P23-201ENST00000414981 KPNB1Q14974 876 aaKnown RBP4.16□□□□□ -1.74
HMGB3P23-201ENST00000414981 ALDH1L2Q3SY69 923 aa4.16□□□□□ -1.74
HMGB3P23-201ENST00000414981 CCDC144NLQ6NUI1 221 aa4.16□□□□□ -1.74
HMGB3P23-201ENST00000414981 SHC4Q6S5L8 630 aa4.16□□□□□ -1.74
HMGB3P23-201ENST00000414981 KSR2Q6VAB6 950 aa4.16□□□□□ -1.74
HMGB3P23-201ENST00000414981 ZNF366Q8N895 744 aa4.16□□□□□ -1.74
HMGB3P23-201ENST00000414981 C9orf106Q8NAJ2 232 aa4.16□□□□□ -1.74
HMGB3P23-201ENST00000414981 OR52L2PQ8NGH6 319 aa4.16□□□□□ -1.74
HMGB3P23-201ENST00000414981 GLMPQ8WWB7 406 aa4.16□□□□□ -1.74
HMGB3P23-201ENST00000414981 ZNF566Q969W8 418 aa4.16□□□□□ -1.74
HMGB3P23-201ENST00000414981 GRAMD1AQ96CP6 724 aa4.16□□□□□ -1.74
HMGB3P23-201ENST00000414981 VCPIP1Q96JH7 1222 aa4.16□□□□□ -1.74
HMGB3P23-201ENST00000414981 ZFYVE19Q96K21 471 aa4.16□□□□□ -1.74
HMGB3P23-201ENST00000414981 RIPOR3Q96MK2 946 aa4.16□□□□□ -1.74
HMGB3P23-201ENST00000414981 TM2D2Q9BX73 214 aa4.16□□□□□ -1.74
HMGB3P23-201ENST00000414981 ZNF700Q9H0M5 742 aa4.16□□□□□ -1.74
HMGB3P23-201ENST00000414981 PPCSQ9HAB8 311 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms