RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 ZNF143P52747 638 aaPredicted RBP10.31□□□□□ -0.76
DDB1-202ENST00000414411 IFFO1Q0D2I5 559 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 CCDC85BQ15834 202 aaPredicted RBP10.31□□□□□ -0.76
DDB1-202ENST00000414411 CCDC14Q49A88 953 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 DCAF6Q58WW2 860 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 MSANTD2Q6P1R3 559 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 KLHDC10Q6PID8 442 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 POTEHQ6S545 545 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 PDZD4Q76G19 769 aaPredicted RBP10.31□□□□□ -0.76
DDB1-202ENST00000414411 SMRP1Q8NCR6 262 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 RXFP2Q8WXD0 754 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 CENPIQ92674 756 aaPredicted RBP10.31□□□□□ -0.76
DDB1-202ENST00000414411 APOL5Q9BWW9 433 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 RNF38Q9H0F5 515 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 ATXN3LQ9H3M9 355 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 RABEP2Q9H5N1 569 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 CCSER2Q9H7U1 834 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 PIDD1Q9HB75 910 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 WDR6Q9NNW5 1121 aaKnown RBP10.31□□□□□ -0.76
DDB1-202ENST00000414411 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.31□□□□□ -0.76
DDB1-202ENST00000414411 MTRF1LQ9UGC7 380 aaKnown RBP10.31□□□□□ -0.76
DDB1-202ENST00000414411 CDH22Q9UJ99 828 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.31□□□□□ -0.76
DDB1-202ENST00000414411 C2orf78A6NCI8 922 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 SRRM3A6NNA2 597 aaPredicted RBP10.31□□□□□ -0.76
DDB1-202ENST00000414411 NDUFAB1O14561 156 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 ZNF197O14709 1029 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 TLR5O60602 858 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 ENDOD1O94919 500 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 IGLV3-25P01717 112 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 RALAP11233 206 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 GJA1P17302 382 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 TFE3P19532 575 aaPredicted RBP10.31□□□□□ -0.76
DDB1-202ENST00000414411 KCNJ1P48048 391 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 PITX1P78337 314 aaPredicted RBP10.31□□□□□ -0.76
DDB1-202ENST00000414411 SLC25A52Q3SY17 297 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 ATAT1Q5SQI0 421 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 HECTD3Q5T447 861 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 OTUD1Q5VV17 481 aaPredicted RBP10.31□□□□□ -0.76
DDB1-202ENST00000414411 DENND2CQ68D51 928 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 TXNDC8Q6A555 127 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 HOOK3Q86VS8 718 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 ARFGAP1Q8N6T3 406 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 MAIP1Q8WWC4 291 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 ART4Q93070 314 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 CFAP57Q96MR6 1250 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 CNPY3Q9BT09 278 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 EPN3Q9H201 632 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 LRRC4CQ9HCJ2 640 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 RRN3Q9NYV6 651 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 NUDT5Q9UKK9 219 aa10.31□□□□□ -0.76
DDB1-202ENST00000414411 EBAG9O00559 213 aa10.3□□□□□ -0.76
DDB1-202ENST00000414411 CAPN9O14815 690 aa10.3□□□□□ -0.76
DDB1-202ENST00000414411 COCHO43405 550 aa10.3□□□□□ -0.76
DDB1-202ENST00000414411 PSTPIP1O43586 416 aa10.3□□□□□ -0.76
DDB1-202ENST00000414411 SHBGP04278 402 aa10.3□□□□□ -0.76
DDB1-202ENST00000414411 PFKLP17858 780 aa10.3□□□□□ -0.76
DDB1-202ENST00000414411 GPD1P21695 349 aa10.3□□□□□ -0.76
DDB1-202ENST00000414411 SDC4P31431 198 aa10.3□□□□□ -0.76
DDB1-202ENST00000414411 PPP2R2AP63151 447 aa10.3□□□□□ -0.76
DDB1-202ENST00000414411 CYP4F8P98187 520 aa10.3□□□□□ -0.76
DDB1-202ENST00000414411 LLGL1Q15334 1064 aa10.3□□□□□ -0.76
DDB1-202ENST00000414411 SKIDA1Q1XH10 827 aa10.3□□□□□ -0.76
DDB1-202ENST00000414411 STXBP5Q5T5C0 1151 aa10.3□□□□□ -0.76
DDB1-202ENST00000414411 SH3PXD2AQ5TCZ1 1133 aa10.3□□□□□ -0.76
DDB1-202ENST00000414411 CES5AQ6NT32 575 aa10.3□□□□□ -0.76
DDB1-202ENST00000414411 NIPA2Q8N8Q9 360 aa10.3□□□□□ -0.76
DDB1-202ENST00000414411 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.3□□□□□ -0.76
DDB1-202ENST00000414411 ITFG1Q8TB96 612 aa10.3□□□□□ -0.76
DDB1-202ENST00000414411 DQX1Q8TE96 717 aaKnown RBP10.3□□□□□ -0.76
DDB1-202ENST00000414411 C1orf54Q8WWF1 131 aa10.3□□□□□ -0.76
DDB1-202ENST00000414411 SUSD6Q92537 303 aa10.3□□□□□ -0.76
DDB1-202ENST00000414411 MRPS31Q92665 395 aaKnown RBP10.3□□□□□ -0.76
DDB1-202ENST00000414411 TLCD1Q96CP7 247 aa10.3□□□□□ -0.76
DDB1-202ENST00000414411 PGAP3Q96FM1 320 aaPredicted RBP10.3□□□□□ -0.76
DDB1-202ENST00000414411 SLC22A12Q96S37 553 aa10.3□□□□□ -0.76
DDB1-202ENST00000414411 CYP2S1Q96SQ9 504 aa10.3□□□□□ -0.76
DDB1-202ENST00000414411 HERPUD2Q9BSE4 406 aa10.3□□□□□ -0.76
DDB1-202ENST00000414411 SLC46A2Q9BY10 475 aa10.3□□□□□ -0.76
DDB1-202ENST00000414411 SMOC2Q9H3U7 446 aa10.3□□□□□ -0.76
DDB1-202ENST00000414411 OLA1Q9NTK5 396 aaKnown RBP10.3□□□□□ -0.76
DDB1-202ENST00000414411 IP6K2Q9UHH9 426 aa10.3□□□□□ -0.76
DDB1-202ENST00000414411 NOVA2Q9UNW9 492 aaKnown RBP10.3□□□□□ -0.76
DDB1-202ENST00000414411 MRPS23Q9Y3D9 190 aaKnown RBP10.3□□□□□ -0.76
DDB1-202ENST00000414411 TRUB2O95900 331 aaKnown RBP10.29□□□□□ -0.76
DDB1-202ENST00000414411 HDCP19113 662 aa10.29□□□□□ -0.76
DDB1-202ENST00000414411 DDX6P26196 483 aaKnown RBP eCLIP10.29□□□□□ -0.76
DDB1-202ENST00000414411 MAN1A1P33908 653 aa10.29□□□□□ -0.76
DDB1-202ENST00000414411 ATP5C1P36542 298 aaKnown RBP10.29□□□□□ -0.76
DDB1-202ENST00000414411 MAGOHP61326 146 aaKnown RBP10.29□□□□□ -0.76
DDB1-202ENST00000414411 PIGHQ14442 188 aaPredicted RBP10.29□□□□□ -0.76
DDB1-202ENST00000414411 SLMAPQ14BN4 828 aa10.29□□□□□ -0.76
DDB1-202ENST00000414411 ACAP1Q15027 740 aa10.29□□□□□ -0.76
DDB1-202ENST00000414411 PPP1R7Q15435 360 aa10.29□□□□□ -0.76
DDB1-202ENST00000414411 TEAD2Q15562 447 aa10.29□□□□□ -0.76
DDB1-202ENST00000414411 C15orf59Q2T9L4 293 aaPredicted RBP10.29□□□□□ -0.76
DDB1-202ENST00000414411 RAB6CQ53S08 254 aa10.29□□□□□ -0.76
DDB1-202ENST00000414411 C10orf120Q5SQS8 335 aa10.29□□□□□ -0.76
DDB1-202ENST00000414411 DAB2IPQ5VWQ8 1189 aa10.29□□□□□ -0.76
DDB1-202ENST00000414411 EP400NLQ6ZTU2 488 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms