RNA–Protein interactions for RNA: ENST00000413963.2

AP001888.1-201, humanhuman

BASIC

Gene AP001888.1, Length 720 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001888.1-201ENST00000413963 SNRNP25Q9BV90 132 aaKnown RBP11.06□□□□□ -0.64
AP001888.1-201ENST00000413963 RAB6CQ9H0N0 254 aa11.06□□□□□ -0.64
AP001888.1-201ENST00000413963 LINC00597Q9H2U6 94 aa11.06□□□□□ -0.64
AP001888.1-201ENST00000413963 EBF3Q9H4W6 596 aa11.06□□□□□ -0.64
AP001888.1-201ENST00000413963 C8orf33Q9H7E9 229 aaPredicted RBP11.06□□□□□ -0.64
AP001888.1-201ENST00000413963 ECT2Q9H8V3 914 aa11.06□□□□□ -0.64
AP001888.1-201ENST00000413963 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.06□□□□□ -0.64
AP001888.1-201ENST00000413963 MARK1Q9P0L2 795 aa11.06□□□□□ -0.64
AP001888.1-201ENST00000413963 RCOR3Q9P2K3 495 aaPredicted RBP11.06□□□□□ -0.64
AP001888.1-201ENST00000413963 PPARGC1AQ9UBK2 798 aaKnown RBP11.06□□□□□ -0.64
AP001888.1-201ENST00000413963 VANGL2Q9ULK5 521 aa11.06□□□□□ -0.64
AP001888.1-201ENST00000413963 DUSP12Q9UNI6 340 aa11.06□□□□□ -0.64
AP001888.1-201ENST00000413963 TCF20Q9UGU0 1960 aaKnown RBP11.05□□□□□ -0.64
AP001888.1-201ENST00000413963 GOLGA6L7A0A1B0GV03 622 aa11.05□□□□□ -0.64
AP001888.1-201ENST00000413963 E9PAM4 449 aa11.05□□□□□ -0.64
AP001888.1-201ENST00000413963 H3BRJ5 948 aa11.05□□□□□ -0.64
AP001888.1-201ENST00000413963 SCAMP3O14828 347 aaKnown RBP11.05□□□□□ -0.64
AP001888.1-201ENST00000413963 FGF10O15520 208 aaPredicted RBP11.05□□□□□ -0.64
AP001888.1-201ENST00000413963 HOXC11O43248 304 aaPredicted RBP11.05□□□□□ -0.64
AP001888.1-201ENST00000413963 DAPK3O43293 454 aa11.05□□□□□ -0.64
AP001888.1-201ENST00000413963 SRGAP2O75044 1071 aa11.05□□□□□ -0.64
AP001888.1-201ENST00000413963 CYP17A1P05093 508 aa11.05□□□□□ -0.64
AP001888.1-201ENST00000413963 ARSAP15289 507 aa11.05□□□□□ -0.64
AP001888.1-201ENST00000413963 IL1R2P27930 398 aa11.05□□□□□ -0.64
AP001888.1-201ENST00000413963 CTNNA1P35221 906 aaKnown RBP11.05□□□□□ -0.64
AP001888.1-201ENST00000413963 HCAR3P49019 387 aa11.05□□□□□ -0.64
AP001888.1-201ENST00000413963 OXCT1P55809 520 aa11.05□□□□□ -0.64
AP001888.1-201ENST00000413963 TAS2R40P59535 323 aa11.05□□□□□ -0.64
AP001888.1-201ENST00000413963 SMTNL2Q2TAL5 461 aa11.05□□□□□ -0.64
AP001888.1-201ENST00000413963 C5orf22Q49AR2 442 aa11.05□□□□□ -0.64
AP001888.1-201ENST00000413963 PPP6R3Q5H9R7 873 aaPredicted RBP11.05□□□□□ -0.64
AP001888.1-201ENST00000413963 KCNT1Q5JUK3 1230 aa11.05□□□□□ -0.64
AP001888.1-201ENST00000413963 LY6G5CQ5SRR4 150 aa11.05□□□□□ -0.64
AP001888.1-201ENST00000413963 DAB2IPQ5VWQ8 1189 aa11.05□□□□□ -0.64
AP001888.1-201ENST00000413963 TRIM68Q6AZZ1 485 aa11.05□□□□□ -0.64
AP001888.1-201ENST00000413963 FBXL22Q6P050 247 aa11.05□□□□□ -0.64
AP001888.1-201ENST00000413963 RHBDF2Q6PJF5 856 aa11.05□□□□□ -0.64
AP001888.1-201ENST00000413963 TPGS1Q6ZTW0 290 aa11.05□□□□□ -0.64
AP001888.1-201ENST00000413963 NT5DC3Q86UY8 548 aa11.05□□□□□ -0.64
AP001888.1-201ENST00000413963 VSIG1Q86XK7 387 aa11.05□□□□□ -0.64
AP001888.1-201ENST00000413963 TMEM25Q86YD3 366 aa11.05□□□□□ -0.64
AP001888.1-201ENST00000413963 TBC1D31Q96DN5 1066 aa11.05□□□□□ -0.64
AP001888.1-201ENST00000413963 ASIC4Q96FT7 647 aa11.05□□□□□ -0.64
AP001888.1-201ENST00000413963 PEBP4Q96S96 227 aa11.05□□□□□ -0.64
AP001888.1-201ENST00000413963 BBS2Q9BXC9 721 aa11.05□□□□□ -0.64
AP001888.1-201ENST00000413963 SLC2A11Q9BYW1 496 aa11.05□□□□□ -0.64
AP001888.1-201ENST00000413963 ZYG11BQ9C0D3 744 aa11.05□□□□□ -0.64
AP001888.1-201ENST00000413963 CATSPERBQ9H7T0 1116 aa11.05□□□□□ -0.64
AP001888.1-201ENST00000413963 PRDM16Q9HAZ2 1276 aa11.05□□□□□ -0.64
AP001888.1-201ENST00000413963 XPO7Q9UIA9 1087 aaKnown RBP11.05□□□□□ -0.64
AP001888.1-201ENST00000413963 PCDHA3Q9Y5H8 950 aa11.05□□□□□ -0.64
AP001888.1-201ENST00000413963 CAPN6Q9Y6Q1 641 aa11.05□□□□□ -0.64
AP001888.1-201ENST00000413963 IGLV3-10A0A075B6K4 115 aa11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 A0A1B0GVM2 712 aa11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 TCAF2A6NFQ2 919 aa11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 DRGXA6NNA5 263 aa11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 ZNF487B1APH4 448 aa11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 NEDD8-MDP1E9PL57 170 aa11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 I6L893 689 aaPredicted RBP11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 ARNTLO00327 626 aa11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 EEF2KO00418 725 aaKnown RBP11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 GFRA2O00451 464 aa11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 CREB3O43889 395 aa11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 TSPAN3O60637 253 aa11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 TBL1XO60907 577 aa11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 CLDN11O75508 207 aa11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 ZRANB2O95218 330 aaKnown RBP eCLIP11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 PENKP01210 267 aaPredicted RBP11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 TNNT1P13805 278 aa11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 TYRP14679 529 aa11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 CTNNA2P26232 953 aa11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 SLC6A4P31645 630 aa11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 GJC1P36383 396 aa11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 EIF2DP41214 584 aaKnown RBP11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 CDH4P55283 916 aa11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 CDH6P55285 790 aa11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 RWDD2BP57060 319 aa11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 TPI1P60174 286 aa11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 TNK2Q07912 1038 aa11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 RWDD4Q6NW29 188 aaKnown RBP11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 RFWD3Q6PCD5 774 aa11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 NUDT18Q6ZVK8 323 aa11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 CYP4V2Q6ZWL3 525 aaPredicted RBP11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 CHST9Q7L1S5 443 aa11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 RALGPS2Q86X27 583 aaPredicted RBP11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 SUGP1Q8IWZ8 645 aaKnown RBP11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 KATNAL2Q8IYT4 538 aa11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 RCOR2Q8IZ40 523 aa11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 CD101Q93033 1021 aa11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 SHDQ96IW2 340 aa11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 RBM41Q96IZ5 413 aaKnown RBP11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 UHRF1Q96T88 793 aaPredicted RBP11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 GOLPH3Q9H4A6 298 aa11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 HPS4Q9NQG7 708 aa11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 ANLNQ9NQW6 1124 aa11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 TMPRSS4Q9NRS4 437 aa11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 GTSE1Q9NYZ3 720 aa11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 ZKSCAN5Q9Y2L8 839 aa11.04□□□□□ -0.64
AP001888.1-201ENST00000413963 JRKLQ9Y4A0 524 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms