RNA–Protein interactions for RNA: ENST00000413758.1

COL6A2-205, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-205ENST00000413758 OR2T3Q8NH03 318 aa17.44■□□□□ 0.38
COL6A2-205ENST00000413758 WFDC5Q8TCV5 224 aa17.44■□□□□ 0.38
COL6A2-205ENST00000413758 SHC3Q92529 594 aa17.44■□□□□ 0.38
COL6A2-205ENST00000413758 RNF34Q969K3 372 aa17.44■□□□□ 0.38
COL6A2-205ENST00000413758 IRX2Q9BZI1 471 aaPredicted RBP17.44■□□□□ 0.38
COL6A2-205ENST00000413758 NUCKS1Q9H1E3 243 aaKnown RBP17.44■□□□□ 0.38
COL6A2-205ENST00000413758 MIR1-1HGQ9H1L0 117 aa17.44■□□□□ 0.38
COL6A2-205ENST00000413758 PDCL3Q9H2J4 239 aa17.44■□□□□ 0.38
COL6A2-205ENST00000413758 SYNCQ9H7C4 482 aa17.44■□□□□ 0.38
COL6A2-205ENST00000413758 FAM204AQ9H8W3 233 aa17.44■□□□□ 0.38
COL6A2-205ENST00000413758 WSB2Q9NYS7 404 aaPredicted RBP17.44■□□□□ 0.38
COL6A2-205ENST00000413758 TJP2Q9UDY2 1190 aa17.44■□□□□ 0.38
COL6A2-205ENST00000413758 SUSD2Q9UGT4 822 aa17.44■□□□□ 0.38
COL6A2-205ENST00000413758 SLC12A6Q9UHW9 1150 aa17.44■□□□□ 0.38
COL6A2-205ENST00000413758 GON4LQ3T8J9 2241 aa17.44■□□□□ 0.38
COL6A2-205ENST00000413758 KCNJ18B7U540 433 aa17.43■□□□□ 0.38
COL6A2-205ENST00000413758 H0Y626 953 aa17.43■□□□□ 0.38
COL6A2-205ENST00000413758 GIPC1O14908 333 aa17.43■□□□□ 0.38
COL6A2-205ENST00000413758 TRUB2O95900 331 aaKnown RBP17.43■□□□□ 0.38
COL6A2-205ENST00000413758 DLDP09622 509 aaKnown RBP17.43■□□□□ 0.38
COL6A2-205ENST00000413758 MAOBP27338 520 aa17.43■□□□□ 0.38
COL6A2-205ENST00000413758 COPAP53621 1224 aa17.43■□□□□ 0.38
COL6A2-205ENST00000413758 ST8SIA6P61647 398 aa17.43■□□□□ 0.38
COL6A2-205ENST00000413758 CDK17Q00537 523 aa17.43■□□□□ 0.38
COL6A2-205ENST00000413758 VWA3BQ502W6 1294 aa17.43■□□□□ 0.38
COL6A2-205ENST00000413758 DCAF6Q58WW2 860 aa17.43■□□□□ 0.38
COL6A2-205ENST00000413758 PEAR1Q5VY43 1037 aaPredicted RBP17.43■□□□□ 0.38
COL6A2-205ENST00000413758 OR6B2Q6IFH4 312 aa17.43■□□□□ 0.38
COL6A2-205ENST00000413758 CHSY1Q86X52 802 aa17.43■□□□□ 0.38
COL6A2-205ENST00000413758 CFAP52Q8N1V2 620 aa17.43■□□□□ 0.38
COL6A2-205ENST00000413758 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.43■□□□□ 0.38
COL6A2-205ENST00000413758 ZNF419Q96HQ0 510 aaPredicted RBP17.43■□□□□ 0.38
COL6A2-205ENST00000413758 PPP1R13BQ96KQ4 1090 aa17.43■□□□□ 0.38
COL6A2-205ENST00000413758 PRICKLE1Q96MT3 831 aaPredicted RBP17.43■□□□□ 0.38
COL6A2-205ENST00000413758 TUBGCP2Q9BSJ2 902 aa17.43■□□□□ 0.38
COL6A2-205ENST00000413758 NUP58Q9BVL2 599 aa17.43■□□□□ 0.38
COL6A2-205ENST00000413758 LHX5Q9H2C1 402 aa17.43■□□□□ 0.38
COL6A2-205ENST00000413758 USP36Q9P275 1121 aaKnown RBP17.43■□□□□ 0.38
COL6A2-205ENST00000413758 ANGPTL2Q9UKU9 493 aa17.43■□□□□ 0.38
COL6A2-205ENST00000413758 CEP83Q9Y592 693 aa17.43■□□□□ 0.38
COL6A2-205ENST00000413758 GRAP2O75791 330 aa17.42■□□□□ 0.38
COL6A2-205ENST00000413758 MOCS3O95396 460 aa17.42■□□□□ 0.38
COL6A2-205ENST00000413758 SYPP08247 313 aa17.42■□□□□ 0.38
COL6A2-205ENST00000413758 SNX16P57768 344 aa17.42■□□□□ 0.38
COL6A2-205ENST00000413758 ZNF252P-AS1Q0IIN9 211 aa17.42■□□□□ 0.38
COL6A2-205ENST00000413758 CAMK2GQ13555 558 aaPredicted RBP17.42■□□□□ 0.38
COL6A2-205ENST00000413758 RAPGEF1Q13905 1077 aa17.42■□□□□ 0.38
COL6A2-205ENST00000413758 TAF5Q15542 800 aa17.42■□□□□ 0.38
COL6A2-205ENST00000413758 MS4A13Q5J8X5 152 aa17.42■□□□□ 0.38
COL6A2-205ENST00000413758 RAP1GAP2Q684P5 730 aa17.42■□□□□ 0.38
COL6A2-205ENST00000413758 BEND5Q7L4P6 421 aa17.42■□□□□ 0.38
COL6A2-205ENST00000413758 ATP6V0D2Q8N8Y2 350 aa17.42■□□□□ 0.38
COL6A2-205ENST00000413758 DEFB124Q8NES8 71 aa17.42■□□□□ 0.38
COL6A2-205ENST00000413758 FIBINQ8TAL6 211 aa17.42■□□□□ 0.38
COL6A2-205ENST00000413758 SNX19Q92543 992 aa17.42■□□□□ 0.38
COL6A2-205ENST00000413758 SLC39A13Q96H72 371 aa17.42■□□□□ 0.38
COL6A2-205ENST00000413758 NDST4Q9H3R1 872 aa17.42■□□□□ 0.38
COL6A2-205ENST00000413758 SLC32A1Q9H598 525 aa17.42■□□□□ 0.38
COL6A2-205ENST00000413758 SUN2Q9UH99 717 aa17.42■□□□□ 0.38
COL6A2-205ENST00000413758 XPO7Q9UIA9 1087 aaKnown RBP17.42■□□□□ 0.38
COL6A2-205ENST00000413758 AJAP1Q9UKB5 411 aaPredicted RBP17.42■□□□□ 0.38
COL6A2-205ENST00000413758 PI4KAP42356 2102 aa17.41■□□□□ 0.38
COL6A2-205ENST00000413758 FOXN3O00409 490 aaPredicted RBP17.41■□□□□ 0.38
COL6A2-205ENST00000413758 ARHGAP33O14559 1287 aa17.41■□□□□ 0.38
COL6A2-205ENST00000413758 OPHN1O60890 802 aa17.41■□□□□ 0.38
COL6A2-205ENST00000413758 DNTTP04053 509 aa17.41■□□□□ 0.38
COL6A2-205ENST00000413758 PNMA6AP0CW24 399 aaPredicted RBP17.41■□□□□ 0.38
COL6A2-205ENST00000413758 TACR2P21452 398 aa17.41■□□□□ 0.38
COL6A2-205ENST00000413758 ERCC5P28715 1186 aaPredicted RBP17.41■□□□□ 0.38
COL6A2-205ENST00000413758 PTPRNQ16849 979 aa17.41■□□□□ 0.38
COL6A2-205ENST00000413758 EFHC1Q5JVL4 640 aa17.41■□□□□ 0.38
COL6A2-205ENST00000413758 DCAF12L1Q5VU92 463 aa17.41■□□□□ 0.38
COL6A2-205ENST00000413758 KIAA0907Q7Z7F0 614 aaPredicted RBP17.41■□□□□ 0.38
COL6A2-205ENST00000413758 DEFB106AQ8N104 65 aa17.41■□□□□ 0.38
COL6A2-205ENST00000413758 C1orf131Q8NDD1 294 aaKnown RBP17.41■□□□□ 0.38
COL6A2-205ENST00000413758 GANCQ8TET4 914 aa17.41■□□□□ 0.38
COL6A2-205ENST00000413758 MYEOVQ96EZ4 313 aa17.41■□□□□ 0.38
COL6A2-205ENST00000413758 BTN2A3PQ96KV6 586 aa17.41■□□□□ 0.38
COL6A2-205ENST00000413758 CPXM1Q96SM3 734 aa17.41■□□□□ 0.38
COL6A2-205ENST00000413758 TMEM245Q9H330 911 aa17.41■□□□□ 0.38
COL6A2-205ENST00000413758 CAPN10Q9HC96 672 aa17.41■□□□□ 0.38
COL6A2-205ENST00000413758 SIX2Q9NPC8 291 aa17.41■□□□□ 0.38
COL6A2-205ENST00000413758 PRSS16Q9NQE7 514 aa17.41■□□□□ 0.38
COL6A2-205ENST00000413758 DDIT4Q9NX09 232 aa17.41■□□□□ 0.38
COL6A2-205ENST00000413758 PCDHGC3Q9UN70 934 aa17.41■□□□□ 0.38
COL6A2-205ENST00000413758 ADAMTS9Q9P2N4 1935 aa17.41■□□□□ 0.38
COL6A2-205ENST00000413758 F5H5T6 163 aa17.4■□□□□ 0.38
COL6A2-205ENST00000413758 HSF2BPO75031 334 aa17.4■□□□□ 0.38
COL6A2-205ENST00000413758 LUC7L3O95232 432 aaKnown RBP17.4■□□□□ 0.38
COL6A2-205ENST00000413758 ASLP04424 464 aa17.4■□□□□ 0.38
COL6A2-205ENST00000413758 SLC2A3P11169 496 aa17.4■□□□□ 0.38
COL6A2-205ENST00000413758 CEACAM1P13688 526 aa17.4■□□□□ 0.38
COL6A2-205ENST00000413758 CSRP1P21291 193 aaKnown RBP17.4■□□□□ 0.38
COL6A2-205ENST00000413758 ABCB4P21439 1286 aa17.4■□□□□ 0.38
COL6A2-205ENST00000413758 CSKP41240 450 aa17.4■□□□□ 0.38
COL6A2-205ENST00000413758 BPIFB4P59827 614 aa17.4■□□□□ 0.38
COL6A2-205ENST00000413758 PITX1P78337 314 aaPredicted RBP17.4■□□□□ 0.38
COL6A2-205ENST00000413758 KCNJ12Q14500 433 aa17.4■□□□□ 0.38
COL6A2-205ENST00000413758 RNF219Q5W0B1 726 aaPredicted RBP17.4■□□□□ 0.38
COL6A2-205ENST00000413758 C11orf57Q6ZUT1 292 aaPredicted RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms