RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 MSANTD4Q8NCY6 345 aa15.35■□□□□ 0.05
LIMS4-201ENST00000413601 SLC30A5Q8TAD4 765 aa15.35■□□□□ 0.05
LIMS4-201ENST00000413601 NAP1L5Q96NT1 182 aaPredicted RBP15.35■□□□□ 0.05
LIMS4-201ENST00000413601 ADAM33Q9BZ11 813 aa15.35■□□□□ 0.05
LIMS4-201ENST00000413601 CD248Q9HCU0 757 aa15.35■□□□□ 0.05
LIMS4-201ENST00000413601 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.35■□□□□ 0.05
LIMS4-201ENST00000413601 CALCOCO1Q9P1Z2 691 aa15.35■□□□□ 0.05
LIMS4-201ENST00000413601 SLC12A6Q9UHW9 1150 aa15.35■□□□□ 0.05
LIMS4-201ENST00000413601 GGA2Q9UJY4 613 aa15.35■□□□□ 0.05
LIMS4-201ENST00000413601 CFAP54Q96N23 3096 aa15.35■□□□□ 0.05
LIMS4-201ENST00000413601 DOCK4Q8N1I0 1966 aa15.35■□□□□ 0.05
LIMS4-201ENST00000413601 TYW5A2RUC4 315 aaKnown RBP15.34■□□□□ 0.05
LIMS4-201ENST00000413601 NPC1O15118 1278 aa15.34■□□□□ 0.05
LIMS4-201ENST00000413601 PABPC1P11940 636 aaKnown RBP15.34■□□□□ 0.05
LIMS4-201ENST00000413601 BCKDHBP21953 392 aa15.34■□□□□ 0.05
LIMS4-201ENST00000413601 SCNN1AP37088 669 aa15.34■□□□□ 0.05
LIMS4-201ENST00000413601 SULT1E1P49888 294 aa15.34■□□□□ 0.05
LIMS4-201ENST00000413601 FILIP1LQ4L180 1135 aa15.34■□□□□ 0.05
LIMS4-201ENST00000413601 OTUD1Q5VV17 481 aaPredicted RBP15.34■□□□□ 0.05
LIMS4-201ENST00000413601 MMS22LQ6ZRQ5 1243 aa15.34■□□□□ 0.05
LIMS4-201ENST00000413601 KIAA0907Q7Z7F0 614 aaPredicted RBP15.34■□□□□ 0.05
LIMS4-201ENST00000413601 PHLDB2Q86SQ0 1253 aa15.34■□□□□ 0.05
LIMS4-201ENST00000413601 ADIPOR2Q86V24 386 aa15.34■□□□□ 0.05
LIMS4-201ENST00000413601 LUZP1Q86V48 1076 aa15.34■□□□□ 0.05
LIMS4-201ENST00000413601 AHI1Q8N157 1196 aa15.34■□□□□ 0.05
LIMS4-201ENST00000413601 CARNMT1Q8N4J0 409 aa15.34■□□□□ 0.05
LIMS4-201ENST00000413601 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.34■□□□□ 0.05
LIMS4-201ENST00000413601 FIBINQ8TAL6 211 aa15.34■□□□□ 0.05
LIMS4-201ENST00000413601 WFIKKN2Q8TEU8 576 aa15.34■□□□□ 0.05
LIMS4-201ENST00000413601 CYB5D2Q8WUJ1 264 aa15.34■□□□□ 0.05
LIMS4-201ENST00000413601 PCDHB18PQ96TA0 734 aa15.34■□□□□ 0.05
LIMS4-201ENST00000413601 NPY6RQ99463 290 aa15.34■□□□□ 0.05
LIMS4-201ENST00000413601 PRMT1Q99873 361 aaKnown RBP15.34■□□□□ 0.05
LIMS4-201ENST00000413601 SLC6A17Q9H1V8 727 aa15.34■□□□□ 0.05
LIMS4-201ENST00000413601 ARRDC1-AS1Q9H2J1 176 aa15.34■□□□□ 0.05
LIMS4-201ENST00000413601 CBX8Q9HC52 389 aa15.34■□□□□ 0.05
LIMS4-201ENST00000413601 USP18Q9UMW8 372 aa15.34■□□□□ 0.05
LIMS4-201ENST00000413601 ZNF292O60281 2723 aa15.34■□□□□ 0.05
LIMS4-201ENST00000413601 GVINP1Q7Z2Y8 2422 aa15.33■□□□□ 0.04
LIMS4-201ENST00000413601 F5H5T6 163 aa15.33■□□□□ 0.04
LIMS4-201ENST00000413601 ZBTB24O43167 697 aaPredicted RBP15.33■□□□□ 0.04
LIMS4-201ENST00000413601 RHOBTB1O94844 696 aa15.33■□□□□ 0.04
LIMS4-201ENST00000413601 LUC7L3O95232 432 aaKnown RBP15.33■□□□□ 0.04
LIMS4-201ENST00000413601 NDUFV2P19404 249 aa15.33■□□□□ 0.04
LIMS4-201ENST00000413601 PRKCHP24723 683 aa15.33■□□□□ 0.04
LIMS4-201ENST00000413601 FLT3P36888 993 aa15.33■□□□□ 0.04
LIMS4-201ENST00000413601 P2RY2P41231 377 aa15.33■□□□□ 0.04
LIMS4-201ENST00000413601 ENPP2Q13822 863 aa15.33■□□□□ 0.04
LIMS4-201ENST00000413601 ELF2Q15723 593 aa15.33■□□□□ 0.04
LIMS4-201ENST00000413601 CCDC6Q16204 474 aa15.33■□□□□ 0.04
LIMS4-201ENST00000413601 FSCBQ5H9T9 825 aa15.33■□□□□ 0.04
LIMS4-201ENST00000413601 MBLAC2Q68D91 279 aa15.33■□□□□ 0.04
LIMS4-201ENST00000413601 TRNP1Q6NT89 227 aa15.33■□□□□ 0.04
LIMS4-201ENST00000413601 TRIM72Q6ZMU5 477 aa15.33■□□□□ 0.04
LIMS4-201ENST00000413601 GPR161Q8N6U8 529 aaKnown RBP15.33■□□□□ 0.04
LIMS4-201ENST00000413601 NT5C3BQ969T7 300 aa15.33■□□□□ 0.04
LIMS4-201ENST00000413601 LOXL4Q96JB6 756 aa15.33■□□□□ 0.04
LIMS4-201ENST00000413601 LMLNQ96KR4 655 aa15.33■□□□□ 0.04
LIMS4-201ENST00000413601 PIGVQ9NUD9 493 aa15.33■□□□□ 0.04
LIMS4-201ENST00000413601 RRN3Q9NYV6 651 aa15.33■□□□□ 0.04
LIMS4-201ENST00000413601 STAP1Q9ULZ2 295 aa15.33■□□□□ 0.04
LIMS4-201ENST00000413601 WDR87Q6ZQQ6 2873 aa15.32■□□□□ 0.04
LIMS4-201ENST00000413601 A0A1B0GTH6 734 aa15.32■□□□□ 0.04
LIMS4-201ENST00000413601 MAP3K13O43283 966 aa15.32■□□□□ 0.04
LIMS4-201ENST00000413601 LRP3O75074 770 aa15.32■□□□□ 0.04
LIMS4-201ENST00000413601 PAGE1O75459 146 aa15.32■□□□□ 0.04
LIMS4-201ENST00000413601 EPN2O95208 641 aa15.32■□□□□ 0.04
LIMS4-201ENST00000413601 ADCY5O95622 1261 aa15.32■□□□□ 0.04
LIMS4-201ENST00000413601 SERPINC1P01008 464 aa15.32■□□□□ 0.04
LIMS4-201ENST00000413601 UNGP13051 313 aaPredicted RBP15.32■□□□□ 0.04
LIMS4-201ENST00000413601 HLA-EP13747 358 aa15.32■□□□□ 0.04
LIMS4-201ENST00000413601 POLR2EP19388 210 aaKnown RBP15.32■□□□□ 0.04
LIMS4-201ENST00000413601 MMP8P22894 467 aa15.32■□□□□ 0.04
LIMS4-201ENST00000413601 LMAN2Q12907 356 aa15.32■□□□□ 0.04
LIMS4-201ENST00000413601 CDH18Q13634 790 aa15.32■□□□□ 0.04
LIMS4-201ENST00000413601 STARD3Q14849 445 aa15.32■□□□□ 0.04
LIMS4-201ENST00000413601 E2F5Q15329 346 aa15.32■□□□□ 0.04
LIMS4-201ENST00000413601 MAP7D1Q3KQU3 841 aa15.32■□□□□ 0.04
LIMS4-201ENST00000413601 ZSCAN23Q3MJ62 389 aa15.32■□□□□ 0.04
LIMS4-201ENST00000413601 SLC25A52Q3SY17 297 aa15.32■□□□□ 0.04
LIMS4-201ENST00000413601 FUT11Q495W5 492 aa15.32■□□□□ 0.04
LIMS4-201ENST00000413601 FNDC3BQ53EP0 1204 aaKnown RBP15.32■□□□□ 0.04
LIMS4-201ENST00000413601 PMS2CLQ68D20 193 aa15.32■□□□□ 0.04
LIMS4-201ENST00000413601 SERPINA13PQ6UXR4 307 aa15.32■□□□□ 0.04
LIMS4-201ENST00000413601 CCDC117Q8IWD4 279 aaPredicted RBP15.32■□□□□ 0.04
LIMS4-201ENST00000413601 ZNF557Q8N988 423 aaPredicted RBP15.32■□□□□ 0.04
LIMS4-201ENST00000413601 SPACA7Q96KW9 195 aa15.32■□□□□ 0.04
LIMS4-201ENST00000413601 MRGPRX1Q96LB2 322 aa15.32■□□□□ 0.04
LIMS4-201ENST00000413601 TBCBQ99426 244 aa15.32■□□□□ 0.04
LIMS4-201ENST00000413601 AGPAT1Q99943 283 aa15.32■□□□□ 0.04
LIMS4-201ENST00000413601 C11orf70Q9BRQ4 267 aa15.32■□□□□ 0.04
LIMS4-201ENST00000413601 SIK2Q9H0K1 926 aa15.32■□□□□ 0.04
LIMS4-201ENST00000413601 METTL5Q9NRN9 209 aaKnown RBP15.32■□□□□ 0.04
LIMS4-201ENST00000413601 SEMA4GQ9NTN9 838 aa15.32■□□□□ 0.04
LIMS4-201ENST00000413601 SEPT11Q9NVA2 429 aaKnown RBP15.32■□□□□ 0.04
LIMS4-201ENST00000413601 MBD1Q9UIS9 605 aaPredicted RBP15.32■□□□□ 0.04
LIMS4-201ENST00000413601 TMEM59LQ9UK28 342 aa15.32■□□□□ 0.04
LIMS4-201ENST00000413601 PLA2G4CQ9UP65 541 aa15.32■□□□□ 0.04
LIMS4-201ENST00000413601 H0Y626 953 aa15.31■□□□□ 0.04
LIMS4-201ENST00000413601 SYNCRIPO60506 623 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms