RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 HLA-DRAP01903 254 aa9.97□□□□□ -0.81
RFFL-203ENST00000413582 ITGAVP06756 1048 aa9.97□□□□□ -0.81
RFFL-203ENST00000413582 DLDP09622 509 aaKnown RBP9.97□□□□□ -0.81
RFFL-203ENST00000413582 PABPC1P11940 636 aaKnown RBP9.97□□□□□ -0.81
RFFL-203ENST00000413582 TRIM21P19474 475 aaKnown RBP9.97□□□□□ -0.81
RFFL-203ENST00000413582 ABCB4P21439 1286 aa9.97□□□□□ -0.81
RFFL-203ENST00000413582 CASP1P29466 404 aa9.97□□□□□ -0.81
RFFL-203ENST00000413582 PIK3CAP42336 1068 aa9.97□□□□□ -0.81
RFFL-203ENST00000413582 AMPD3Q01432 767 aa9.97□□□□□ -0.81
RFFL-203ENST00000413582 KCNJ12Q14500 433 aa9.97□□□□□ -0.81
RFFL-203ENST00000413582 STK38Q15208 465 aa9.97□□□□□ -0.81
RFFL-203ENST00000413582 TRIP4Q15650 581 aaPredicted RBP9.97□□□□□ -0.81
RFFL-203ENST00000413582 TBC1D25Q3MII6 688 aa9.97□□□□□ -0.81
RFFL-203ENST00000413582 PPP1R26Q5T8A7 1209 aaPredicted RBP9.97□□□□□ -0.81
RFFL-203ENST00000413582 SFMBT2Q5VUG0 894 aa9.97□□□□□ -0.81
RFFL-203ENST00000413582 MBLAC2Q68D91 279 aa9.97□□□□□ -0.81
RFFL-203ENST00000413582 NCEH1Q6PIU2 408 aa9.97□□□□□ -0.81
RFFL-203ENST00000413582 USP30Q70CQ3 517 aa9.97□□□□□ -0.81
RFFL-203ENST00000413582 SV2AQ7L0J3 742 aa9.97□□□□□ -0.81
RFFL-203ENST00000413582 RSRC2Q7L4I2 434 aaKnown RBP9.97□□□□□ -0.81
RFFL-203ENST00000413582 AHI1Q8N157 1196 aa9.97□□□□□ -0.81
RFFL-203ENST00000413582 EID2Q8N6I1 236 aa9.97□□□□□ -0.81
RFFL-203ENST00000413582 GOLGA5Q8TBA6 731 aa9.97□□□□□ -0.81
RFFL-203ENST00000413582 WFDC5Q8TCV5 224 aa9.97□□□□□ -0.81
RFFL-203ENST00000413582 RFFLQ8WZ73 363 aa9.97□□□□□ -0.81
RFFL-203ENST00000413582 GOLGA1Q92805 767 aa9.97□□□□□ -0.81
RFFL-203ENST00000413582 TMEM176AQ96HP8 235 aa9.97□□□□□ -0.81
RFFL-203ENST00000413582 NT5C1AQ9BXI3 368 aa9.97□□□□□ -0.81
RFFL-203ENST00000413582 RSPH9Q9H1X1 276 aaPredicted RBP9.97□□□□□ -0.81
RFFL-203ENST00000413582 PABPC3Q9H361 631 aaKnown RBP9.97□□□□□ -0.81
RFFL-203ENST00000413582 APOBEC3GQ9HC16 384 aaKnown RBP9.97□□□□□ -0.81
RFFL-203ENST00000413582 SLC39A2Q9NP94 309 aa9.97□□□□□ -0.81
RFFL-203ENST00000413582 DMAC2Q9NW81 257 aa9.97□□□□□ -0.81
RFFL-203ENST00000413582 PLA2G4CQ9UP65 541 aa9.97□□□□□ -0.81
RFFL-203ENST00000413582 DOCK9Q9BZ29 2069 aa9.97□□□□□ -0.81
RFFL-203ENST00000413582 CAPN8A6NHC0 703 aa9.96□□□□□ -0.82
RFFL-203ENST00000413582 FAM47DPA6NHR8 397 aa9.96□□□□□ -0.82
RFFL-203ENST00000413582 WNT9AO14904 365 aa9.96□□□□□ -0.82
RFFL-203ENST00000413582 SPTLC2O15270 562 aa9.96□□□□□ -0.82
RFFL-203ENST00000413582 PPP6R2O75170 966 aa9.96□□□□□ -0.82
RFFL-203ENST00000413582 KIF20AO95235 890 aa9.96□□□□□ -0.82
RFFL-203ENST00000413582 SGSHP51688 502 aa9.96□□□□□ -0.82
RFFL-203ENST00000413582 GALCP54803 685 aa9.96□□□□□ -0.82
RFFL-203ENST00000413582 ZNF445P59923 1031 aa9.96□□□□□ -0.82
RFFL-203ENST00000413582 YWHAGP61981 247 aaKnown RBP eCLIP9.96□□□□□ -0.82
RFFL-203ENST00000413582 CXADRP78310 365 aa9.96□□□□□ -0.82
RFFL-203ENST00000413582 CCDC173Q0VFZ6 552 aa9.96□□□□□ -0.82
RFFL-203ENST00000413582 ILKQ13418 452 aa9.96□□□□□ -0.82
RFFL-203ENST00000413582 NFKBIBQ15653 356 aa9.96□□□□□ -0.82
RFFL-203ENST00000413582 RAB41Q5JT25 222 aa9.96□□□□□ -0.82
RFFL-203ENST00000413582 C1orf220Q5T0J3 134 aa9.96□□□□□ -0.82
RFFL-203ENST00000413582 BHLHA9Q7RTU4 235 aa9.96□□□□□ -0.82
RFFL-203ENST00000413582 KANSL1Q7Z3B3 1105 aa9.96□□□□□ -0.82
RFFL-203ENST00000413582 SLC9A9Q8IVB4 645 aa9.96□□□□□ -0.82
RFFL-203ENST00000413582 ARHGAP18Q8N392 663 aa9.96□□□□□ -0.82
RFFL-203ENST00000413582 DCBLD1Q8N8Z6 715 aa9.96□□□□□ -0.82
RFFL-203ENST00000413582 TMC2Q8TDI7 906 aa9.96□□□□□ -0.82
RFFL-203ENST00000413582 TMEM174Q8WUU8 243 aa9.96□□□□□ -0.82
RFFL-203ENST00000413582 MYO19Q96H55 970 aa9.96□□□□□ -0.82
RFFL-203ENST00000413582 NIF3L1Q9GZT8 377 aa9.96□□□□□ -0.82
RFFL-203ENST00000413582 BLZF1Q9H2G9 400 aa9.96□□□□□ -0.82
RFFL-203ENST00000413582 MTG2Q9H4K7 406 aa9.96□□□□□ -0.82
RFFL-203ENST00000413582 CYP3A43Q9HB55 503 aa9.96□□□□□ -0.82
RFFL-203ENST00000413582 GDF3Q9NR23 364 aa9.96□□□□□ -0.82
RFFL-203ENST00000413582 STOML2Q9UJZ1 356 aa9.96□□□□□ -0.82
RFFL-203ENST00000413582 PIEZO2Q9H5I5 2752 aa9.96□□□□□ -0.82
RFFL-203ENST00000413582 A0A1W2PP55 124 aa9.95□□□□□ -0.82
RFFL-203ENST00000413582 MID1O15344 667 aa9.95□□□□□ -0.82
RFFL-203ENST00000413582 ATP5BP06576 529 aaKnown RBP9.95□□□□□ -0.82
RFFL-203ENST00000413582 CD58P19256 250 aa9.95□□□□□ -0.82
RFFL-203ENST00000413582 GLDCP23378 1020 aa9.95□□□□□ -0.82
RFFL-203ENST00000413582 CD38P28907 300 aa9.95□□□□□ -0.82
RFFL-203ENST00000413582 CD70P32970 193 aa9.95□□□□□ -0.82
RFFL-203ENST00000413582 ACTN2P35609 894 aa9.95□□□□□ -0.82
RFFL-203ENST00000413582 ARRB1P49407 418 aaPredicted RBP9.95□□□□□ -0.82
RFFL-203ENST00000413582 NXPH1P58417 271 aa9.95□□□□□ -0.82
RFFL-203ENST00000413582 INSM1Q01101 510 aaPredicted RBP9.95□□□□□ -0.82
RFFL-203ENST00000413582 KCNH2Q12809 1159 aa9.95□□□□□ -0.82
RFFL-203ENST00000413582 SKOR2Q2VWA4 1001 aaPredicted RBP9.95□□□□□ -0.82
RFFL-203ENST00000413582 PIGZQ86VD9 579 aa9.95□□□□□ -0.82
RFFL-203ENST00000413582 FMNL3Q8IVF7 1028 aa9.95□□□□□ -0.82
RFFL-203ENST00000413582 CACTIN-AS1Q8N1I8 211 aa9.95□□□□□ -0.82
RFFL-203ENST00000413582 IQUBQ8NA54 791 aa9.95□□□□□ -0.82
RFFL-203ENST00000413582 KIAA0895Q8NCT3 520 aa9.95□□□□□ -0.82
RFFL-203ENST00000413582 SKA1Q96BD8 255 aa9.95□□□□□ -0.82
RFFL-203ENST00000413582 SPATA32Q96LK8 384 aa9.95□□□□□ -0.82
RFFL-203ENST00000413582 SEMA4CQ9C0C4 833 aa9.95□□□□□ -0.82
RFFL-203ENST00000413582 MAGEF1Q9HAY2 307 aa9.95□□□□□ -0.82
RFFL-203ENST00000413582 AASDHPPTQ9NRN7 309 aa9.95□□□□□ -0.82
RFFL-203ENST00000413582 FBXL12Q9NXK8 326 aa9.95□□□□□ -0.82
RFFL-203ENST00000413582 SCML1Q9UN30 329 aa9.95□□□□□ -0.82
RFFL-203ENST00000413582 CLCA2Q9UQC9 943 aa9.95□□□□□ -0.82
RFFL-203ENST00000413582 NCKAP1Q9Y2A7 1128 aa9.95□□□□□ -0.82
RFFL-203ENST00000413582 PVALEFA0A1B0GWK0 134 aa9.94□□□□□ -0.82
RFFL-203ENST00000413582 LRRC72A6NJI9 287 aa9.94□□□□□ -0.82
RFFL-203ENST00000413582 IKBKBO14920 756 aa9.94□□□□□ -0.82
RFFL-203ENST00000413582 SIN3BO75182 1162 aa9.94□□□□□ -0.82
RFFL-203ENST00000413582 LATS1O95835 1130 aa9.94□□□□□ -0.82
RFFL-203ENST00000413582 NR3C1P04150 777 aa9.94□□□□□ -0.82
RFFL-203ENST00000413582 CKMT2P17540 419 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms