RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 ANKRD20A12PQ8NF67 263 aa10.55□□□□□ -0.72
NCKIPSD-202ENST00000413374 DDX1Q92499 740 aaKnown RBP10.55□□□□□ -0.72
NCKIPSD-202ENST00000413374 AZIN2Q96A70 460 aa10.55□□□□□ -0.72
NCKIPSD-202ENST00000413374 SLC2A13Q96QE2 648 aa10.55□□□□□ -0.72
NCKIPSD-202ENST00000413374 TRIM62Q9BVG3 475 aa10.55□□□□□ -0.72
NCKIPSD-202ENST00000413374 MKRN2Q9H000 416 aaKnown RBP10.55□□□□□ -0.72
NCKIPSD-202ENST00000413374 MTG2Q9H4K7 406 aa10.55□□□□□ -0.72
NCKIPSD-202ENST00000413374 PRDM16Q9HAZ2 1276 aa10.55□□□□□ -0.72
NCKIPSD-202ENST00000413374 VPS45Q9NRW7 570 aa10.55□□□□□ -0.72
NCKIPSD-202ENST00000413374 TMEM74BQ9NUR3 256 aa10.55□□□□□ -0.72
NCKIPSD-202ENST00000413374 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.55□□□□□ -0.72
NCKIPSD-202ENST00000413374 DLL3Q9NYJ7 618 aa10.55□□□□□ -0.72
NCKIPSD-202ENST00000413374 LIMA1Q9UHB6 759 aaKnown RBP10.55□□□□□ -0.72
NCKIPSD-202ENST00000413374 PCDHGA5Q9Y5G8 931 aa10.55□□□□□ -0.72
NCKIPSD-202ENST00000413374 SNX10Q9Y5X0 201 aa10.55□□□□□ -0.72
NCKIPSD-202ENST00000413374 MYO16Q9Y6X6 1858 aa10.55□□□□□ -0.72
NCKIPSD-202ENST00000413374 RIF1Q5UIP0 2472 aaKnown RBP10.55□□□□□ -0.72
NCKIPSD-202ENST00000413374 IGHV1OR15-9A0A0B4J2B8 117 aa10.54□□□□□ -0.72
NCKIPSD-202ENST00000413374 TYW5A2RUC4 315 aaKnown RBP10.54□□□□□ -0.72
NCKIPSD-202ENST00000413374 KCNU1A8MYU2 1149 aa10.54□□□□□ -0.72
NCKIPSD-202ENST00000413374 M0QYT0 321 aa10.54□□□□□ -0.72
NCKIPSD-202ENST00000413374 HSF2BPO75031 334 aa10.54□□□□□ -0.72
NCKIPSD-202ENST00000413374 IGLV3-25P01717 112 aa10.54□□□□□ -0.72
NCKIPSD-202ENST00000413374 GLI1P08151 1106 aa10.54□□□□□ -0.72
NCKIPSD-202ENST00000413374 ABCB4P21439 1286 aa10.54□□□□□ -0.72
NCKIPSD-202ENST00000413374 ITPKAP23677 461 aa10.54□□□□□ -0.72
NCKIPSD-202ENST00000413374 NOS2P35228 1153 aa10.54□□□□□ -0.72
NCKIPSD-202ENST00000413374 SOX5P35711 763 aa10.54□□□□□ -0.72
NCKIPSD-202ENST00000413374 CTSOP43234 321 aaPredicted RBP10.54□□□□□ -0.72
NCKIPSD-202ENST00000413374 SNX16P57768 344 aa10.54□□□□□ -0.72
NCKIPSD-202ENST00000413374 ZNF445P59923 1031 aa10.54□□□□□ -0.72
NCKIPSD-202ENST00000413374 NNTQ13423 1086 aa10.54□□□□□ -0.72
NCKIPSD-202ENST00000413374 EIF4HQ15056 248 aaKnown RBP10.54□□□□□ -0.72
NCKIPSD-202ENST00000413374 FAM102AQ5T9C2 384 aaPredicted RBP10.54□□□□□ -0.72
NCKIPSD-202ENST00000413374 FAM124AQ86V42 546 aa10.54□□□□□ -0.72
NCKIPSD-202ENST00000413374 C11orf74Q86VG3 221 aa10.54□□□□□ -0.72
NCKIPSD-202ENST00000413374 AHI1Q8N157 1196 aa10.54□□□□□ -0.72
NCKIPSD-202ENST00000413374 HJURPQ8NCD3 748 aaPredicted RBP10.54□□□□□ -0.72
NCKIPSD-202ENST00000413374 NEK11Q8NG66 645 aa10.54□□□□□ -0.72
NCKIPSD-202ENST00000413374 SLC30A5Q8TAD4 765 aa10.54□□□□□ -0.72
NCKIPSD-202ENST00000413374 FIBINQ8TAL6 211 aa10.54□□□□□ -0.72
NCKIPSD-202ENST00000413374 WFIKKN2Q8TEU8 576 aa10.54□□□□□ -0.72
NCKIPSD-202ENST00000413374 C18orf8Q96DM3 657 aa10.54□□□□□ -0.72
NCKIPSD-202ENST00000413374 SIPA1Q96FS4 1042 aa10.54□□□□□ -0.72
NCKIPSD-202ENST00000413374 BTN2A3PQ96KV6 586 aa10.54□□□□□ -0.72
NCKIPSD-202ENST00000413374 SPAG5Q96R06 1193 aa10.54□□□□□ -0.72
NCKIPSD-202ENST00000413374 SIK2Q9H0K1 926 aa10.54□□□□□ -0.72
NCKIPSD-202ENST00000413374 HSD3B7Q9H2F3 369 aa10.54□□□□□ -0.72
NCKIPSD-202ENST00000413374 FSCN3Q9NQT6 498 aa10.54□□□□□ -0.72
NCKIPSD-202ENST00000413374 ASNSD1Q9NWL6 643 aa10.54□□□□□ -0.72
NCKIPSD-202ENST00000413374 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.54□□□□□ -0.72
NCKIPSD-202ENST00000413374 INTS6Q9UL03 887 aaKnown RBP10.54□□□□□ -0.72
NCKIPSD-202ENST00000413374 SIK3Q9Y2K2 1263 aa10.54□□□□□ -0.72
NCKIPSD-202ENST00000413374 EP300Q09472 2414 aaPredicted RBP10.54□□□□□ -0.72
NCKIPSD-202ENST00000413374 F5H5T6 163 aa10.53□□□□□ -0.72
NCKIPSD-202ENST00000413374 KHNYNO15037 678 aaKnown RBP10.53□□□□□ -0.72
NCKIPSD-202ENST00000413374 TEX33O43247 280 aa10.53□□□□□ -0.72
NCKIPSD-202ENST00000413374 NDUFS2O75306 463 aa10.53□□□□□ -0.72
NCKIPSD-202ENST00000413374 ZNF217O75362 1048 aa10.53□□□□□ -0.72
NCKIPSD-202ENST00000413374 DAB1O75553 588 aa10.53□□□□□ -0.72
NCKIPSD-202ENST00000413374 ATP5BP06576 529 aaKnown RBP10.53□□□□□ -0.72
NCKIPSD-202ENST00000413374 ACADMP11310 421 aa10.53□□□□□ -0.72
NCKIPSD-202ENST00000413374 ZNF18P17022 549 aa10.53□□□□□ -0.72
NCKIPSD-202ENST00000413374 CHRNB2P17787 502 aa10.53□□□□□ -0.72
NCKIPSD-202ENST00000413374 MAOBP27338 520 aa10.53□□□□□ -0.72
NCKIPSD-202ENST00000413374 CCR1P32246 355 aa10.53□□□□□ -0.72
NCKIPSD-202ENST00000413374 CSKP41240 450 aa10.53□□□□□ -0.72
NCKIPSD-202ENST00000413374 STAT1P42224 750 aa10.53□□□□□ -0.72
NCKIPSD-202ENST00000413374 SULT1E1P49888 294 aa10.53□□□□□ -0.72
NCKIPSD-202ENST00000413374 COPAP53621 1224 aa10.53□□□□□ -0.72
NCKIPSD-202ENST00000413374 IRX4P78413 519 aa10.53□□□□□ -0.72
NCKIPSD-202ENST00000413374 EIF4EBP2Q13542 120 aaPredicted RBP10.53□□□□□ -0.72
NCKIPSD-202ENST00000413374 CDH18Q13634 790 aa10.53□□□□□ -0.72
NCKIPSD-202ENST00000413374 ENPP2Q13822 863 aa10.53□□□□□ -0.72
NCKIPSD-202ENST00000413374 PTPRNQ16849 979 aa10.53□□□□□ -0.72
NCKIPSD-202ENST00000413374 MPP7Q5T2T1 576 aa10.53□□□□□ -0.72
NCKIPSD-202ENST00000413374 LYSMD4Q5XG99 296 aa10.53□□□□□ -0.72
NCKIPSD-202ENST00000413374 SLC36A4Q6YBV0 504 aa10.53□□□□□ -0.72
NCKIPSD-202ENST00000413374 SLC26A9Q7LBE3 791 aa10.53□□□□□ -0.72
NCKIPSD-202ENST00000413374 KIAA0907Q7Z7F0 614 aaPredicted RBP10.53□□□□□ -0.72
NCKIPSD-202ENST00000413374 C14orf80Q86SX3 495 aa10.53□□□□□ -0.72
NCKIPSD-202ENST00000413374 XYLT1Q86Y38 959 aa10.53□□□□□ -0.72
NCKIPSD-202ENST00000413374 RGL4Q8IZJ4 473 aa10.53□□□□□ -0.72
NCKIPSD-202ENST00000413374 APCDD1Q8J025 514 aa10.53□□□□□ -0.72
NCKIPSD-202ENST00000413374 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.53□□□□□ -0.72
NCKIPSD-202ENST00000413374 NETO1Q8TDF5 533 aa10.53□□□□□ -0.72
NCKIPSD-202ENST00000413374 EPS8L1Q8TE68 723 aa10.53□□□□□ -0.72
NCKIPSD-202ENST00000413374 PRCCQ92733 491 aaPredicted RBP10.53□□□□□ -0.72
NCKIPSD-202ENST00000413374 IGSF8Q969P0 613 aa10.53□□□□□ -0.72
NCKIPSD-202ENST00000413374 LMLNQ96KR4 655 aa10.53□□□□□ -0.72
NCKIPSD-202ENST00000413374 RPL10LQ96L21 214 aaKnown RBP10.53□□□□□ -0.72
NCKIPSD-202ENST00000413374 TBCBQ99426 244 aa10.53□□□□□ -0.72
NCKIPSD-202ENST00000413374 ADAM33Q9BZ11 813 aa10.53□□□□□ -0.72
NCKIPSD-202ENST00000413374 TMPRSS4Q9NRS4 437 aa10.53□□□□□ -0.72
NCKIPSD-202ENST00000413374 SEPT11Q9NVA2 429 aaKnown RBP10.53□□□□□ -0.72
NCKIPSD-202ENST00000413374 VANGL2Q9ULK5 521 aa10.53□□□□□ -0.72
NCKIPSD-202ENST00000413374 HS3ST4Q9Y661 456 aa10.53□□□□□ -0.72
NCKIPSD-202ENST00000413374 FANCMQ8IYD8 2048 aa10.53□□□□□ -0.72
NCKIPSD-202ENST00000413374 FAM186AA6NE01 2351 aa10.52□□□□□ -0.73
NCKIPSD-202ENST00000413374 MED19A0JLT2 244 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms