RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 GDF10P55107 478 aa14.22□□□□□ -0.13
CLTCL1-201ENST00000412649 MYL6P60660 151 aa14.22□□□□□ -0.13
CLTCL1-201ENST00000412649 TSPY1Q01534 308 aa14.22□□□□□ -0.13
CLTCL1-201ENST00000412649 PRKCEQ02156 737 aa14.22□□□□□ -0.13
CLTCL1-201ENST00000412649 SPIRE1Q08AE8 756 aa14.22□□□□□ -0.13
CLTCL1-201ENST00000412649 FOXB2Q5VYV0 432 aa14.22□□□□□ -0.13
CLTCL1-201ENST00000412649 UNC5AQ6ZN44 842 aa14.22□□□□□ -0.13
CLTCL1-201ENST00000412649 RXFP2Q8WXD0 754 aa14.22□□□□□ -0.13
CLTCL1-201ENST00000412649 RAD21L1Q9H4I0 556 aa14.22□□□□□ -0.13
CLTCL1-201ENST00000412649 KCNQ5Q9NR82 932 aa14.22□□□□□ -0.13
CLTCL1-201ENST00000412649 NCKIPSDQ9NZQ3 722 aa14.22□□□□□ -0.13
CLTCL1-201ENST00000412649 TMA7Q9Y2S6 64 aaKnown RBP14.22□□□□□ -0.13
CLTCL1-201ENST00000412649 CHD4Q14839 1912 aa14.22□□□□□ -0.13
CLTCL1-201ENST00000412649 PABPN1LA6NDY0 278 aaKnown RBP14.22□□□□□ -0.13
CLTCL1-201ENST00000412649 ASNA1O43681 348 aa14.22□□□□□ -0.13
CLTCL1-201ENST00000412649 DEFA1P59665 94 aa14.22□□□□□ -0.13
CLTCL1-201ENST00000412649 DEFA3P59666 94 aa14.22□□□□□ -0.13
CLTCL1-201ENST00000412649 YWHAZP63104 245 aaKnown RBP14.22□□□□□ -0.13
CLTCL1-201ENST00000412649 CDK18Q07002 472 aa14.22□□□□□ -0.13
CLTCL1-201ENST00000412649 KLF1Q13351 362 aaPredicted RBP14.22□□□□□ -0.13
CLTCL1-201ENST00000412649 GLMNQ92990 594 aa14.22□□□□□ -0.13
CLTCL1-201ENST00000412649 DDX4Q9NQI0 724 aaKnown RBP14.22□□□□□ -0.13
CLTCL1-201ENST00000412649 ZNF302Q9NR11 478 aa14.22□□□□□ -0.13
CLTCL1-201ENST00000412649 PIH1D1Q9NWS0 290 aaKnown RBP14.22□□□□□ -0.13
CLTCL1-201ENST00000412649 H0YIN7 160 aa14.22□□□□□ -0.13
CLTCL1-201ENST00000412649 MAGEB3O15480 346 aa14.22□□□□□ -0.13
CLTCL1-201ENST00000412649 EIF2S1P05198 315 aaKnown RBP14.22□□□□□ -0.13
CLTCL1-201ENST00000412649 MGAT1P26572 445 aa14.22□□□□□ -0.13
CLTCL1-201ENST00000412649 MSS51Q4VC12 460 aa14.22□□□□□ -0.13
CLTCL1-201ENST00000412649 FAM196AQ6ZSG2 479 aa14.22□□□□□ -0.13
CLTCL1-201ENST00000412649 TTC30AQ86WT1 665 aa14.22□□□□□ -0.13
CLTCL1-201ENST00000412649 HPS1Q92902 700 aa14.22□□□□□ -0.13
CLTCL1-201ENST00000412649 PRICKLE1Q96MT3 831 aaPredicted RBP14.22□□□□□ -0.13
CLTCL1-201ENST00000412649 TCF12Q99081 682 aa14.22□□□□□ -0.13
CLTCL1-201ENST00000412649 MMP19Q99542 508 aa14.22□□□□□ -0.13
CLTCL1-201ENST00000412649 CPNE1Q99829 537 aa14.22□□□□□ -0.13
CLTCL1-201ENST00000412649 ZNF341Q9BYN7 854 aa14.22□□□□□ -0.13
CLTCL1-201ENST00000412649 JPH1Q9HDC5 661 aaPredicted RBP14.22□□□□□ -0.13
CLTCL1-201ENST00000412649 CCDC167Q9P0B6 97 aa14.22□□□□□ -0.13
CLTCL1-201ENST00000412649 TMED5Q9Y3A6 229 aa14.22□□□□□ -0.13
CLTCL1-201ENST00000412649 SIGLEC16A6NMB1 481 aa14.21□□□□□ -0.13
CLTCL1-201ENST00000412649 TMEM114B3SHH9 223 aa14.21□□□□□ -0.13
CLTCL1-201ENST00000412649 POLRMTO00411 1230 aaKnown RBP14.21□□□□□ -0.13
CLTCL1-201ENST00000412649 CYP1A1P04798 512 aaPredicted RBP14.21□□□□□ -0.13
CLTCL1-201ENST00000412649 PRKAA2P54646 552 aa14.21□□□□□ -0.13
CLTCL1-201ENST00000412649 IGBP1P78318 339 aa14.21□□□□□ -0.13
CLTCL1-201ENST00000412649 ITKQ08881 620 aa14.21□□□□□ -0.13
CLTCL1-201ENST00000412649 ORC1Q13415 861 aa14.21□□□□□ -0.13
CLTCL1-201ENST00000412649 MTX3Q5HYI7 312 aa14.21□□□□□ -0.13
CLTCL1-201ENST00000412649 ANKRD23Q86SG2 305 aa14.21□□□□□ -0.13
CLTCL1-201ENST00000412649 CCDC60Q8IWA6 550 aaPredicted RBP14.21□□□□□ -0.13
CLTCL1-201ENST00000412649 PGAM4Q8N0Y7 254 aa14.21□□□□□ -0.13
CLTCL1-201ENST00000412649 UBR7Q8N806 425 aa14.21□□□□□ -0.13
CLTCL1-201ENST00000412649 SCAIQ8N9R8 606 aa14.21□□□□□ -0.13
CLTCL1-201ENST00000412649 TMEM161BQ8NDZ6 487 aa14.21□□□□□ -0.13
CLTCL1-201ENST00000412649 CALML6Q8TD86 181 aa14.21□□□□□ -0.13
CLTCL1-201ENST00000412649 NCLNQ969V3 563 aa14.21□□□□□ -0.13
CLTCL1-201ENST00000412649 MED10Q9BTT4 135 aa14.21□□□□□ -0.13
CLTCL1-201ENST00000412649 CCDC106Q9BWC9 280 aa14.21□□□□□ -0.13
CLTCL1-201ENST00000412649 RBMX2Q9Y388 322 aaKnown RBP14.21□□□□□ -0.13
CLTCL1-201ENST00000412649 KANSL1LA0AUZ9 987 aa14.21□□□□□ -0.13
CLTCL1-201ENST00000412649 ITM2AO43736 263 aa14.21□□□□□ -0.13
CLTCL1-201ENST00000412649 S100A5P33763 92 aa14.21□□□□□ -0.13
CLTCL1-201ENST00000412649 PTGER2P43116 358 aa14.21□□□□□ -0.13
CLTCL1-201ENST00000412649 ZACNQ401N2 412 aa14.21□□□□□ -0.13
CLTCL1-201ENST00000412649 RWDD4Q6NW29 188 aaKnown RBP14.21□□□□□ -0.13
CLTCL1-201ENST00000412649 TNS4Q8IZW8 715 aa14.21□□□□□ -0.13
CLTCL1-201ENST00000412649 CAPSLQ8WWF8 208 aa14.21□□□□□ -0.13
CLTCL1-201ENST00000412649 MFSD14AQ96MC6 490 aa14.21□□□□□ -0.13
CLTCL1-201ENST00000412649 NOL11Q9H8H0 719 aaKnown RBP14.21□□□□□ -0.13
CLTCL1-201ENST00000412649 FBXO40Q9UH90 709 aa14.21□□□□□ -0.13
CLTCL1-201ENST00000412649 ATICP31939 592 aa14.21□□□□□ -0.13
CLTCL1-201ENST00000412649 AVPR1AP37288 418 aa14.21□□□□□ -0.13
CLTCL1-201ENST00000412649 GRIA3P42263 894 aa14.21□□□□□ -0.13
CLTCL1-201ENST00000412649 EFNA5P52803 228 aa14.21□□□□□ -0.13
CLTCL1-201ENST00000412649 GAD2Q05329 585 aa14.21□□□□□ -0.13
CLTCL1-201ENST00000412649 TAF2Q6P1X5 1199 aa14.21□□□□□ -0.13
CLTCL1-201ENST00000412649 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.21□□□□□ -0.13
CLTCL1-201ENST00000412649 FBXO27Q8NI29 283 aa14.21□□□□□ -0.13
CLTCL1-201ENST00000412649 SLC35B2Q8TB61 432 aa14.21□□□□□ -0.13
CLTCL1-201ENST00000412649 ELMO2Q96JJ3 720 aa14.21□□□□□ -0.13
CLTCL1-201ENST00000412649 WDR55Q9H6Y2 383 aaPredicted RBP14.21□□□□□ -0.13
CLTCL1-201ENST00000412649 ZDHHC7Q9NXF8 308 aa14.21□□□□□ -0.13
CLTCL1-201ENST00000412649 SF3B1O75533 1304 aaKnown RBP eCLIP14.21□□□□□ -0.13
CLTCL1-201ENST00000412649 SH3PXD2BA1X283 911 aa14.21□□□□□ -0.14
CLTCL1-201ENST00000412649 KCNQ2O43526 872 aa14.21□□□□□ -0.14
CLTCL1-201ENST00000412649 COQ9O75208 318 aa14.21□□□□□ -0.14
CLTCL1-201ENST00000412649 DDHD2O94830 711 aa14.21□□□□□ -0.14
CLTCL1-201ENST00000412649 CCDC159P0C7I6 412 aa14.21□□□□□ -0.14
CLTCL1-201ENST00000412649 PORP16435 677 aaPredicted RBP14.21□□□□□ -0.14
CLTCL1-201ENST00000412649 TDRD10Q5VZ19 366 aaKnown RBP14.21□□□□□ -0.14
CLTCL1-201ENST00000412649 TTC39CQ8N584 583 aa14.21□□□□□ -0.14
CLTCL1-201ENST00000412649 OR6B3Q8NGW1 331 aa14.21□□□□□ -0.14
CLTCL1-201ENST00000412649 LMO3Q8TAP4 145 aa14.21□□□□□ -0.14
CLTCL1-201ENST00000412649 GIMAP4Q9NUV9 329 aa14.21□□□□□ -0.14
CLTCL1-201ENST00000412649 ARHGEF9O43307 516 aa14.2□□□□□ -0.14
CLTCL1-201ENST00000412649 HMGCRP04035 888 aa14.2□□□□□ -0.14
CLTCL1-201ENST00000412649 CLK1P49759 484 aaKnown RBP14.2□□□□□ -0.14
CLTCL1-201ENST00000412649 ARHGDIAP52565 204 aa14.2□□□□□ -0.14
CLTCL1-201ENST00000412649 INHBEP58166 350 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms