RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 MED4Q9NPJ6 270 aa5.66□□□□□ -1.5
LINC00342-201ENST00000412393 MYO1AQ9UBC5 1043 aa5.66□□□□□ -1.5
LINC00342-201ENST00000412393 MTRRQ9UBK8 725 aa5.66□□□□□ -1.5
LINC00342-201ENST00000412393 TBX20Q9UMR3 447 aa5.66□□□□□ -1.5
LINC00342-201ENST00000412393 HPSEQ9Y251 543 aa5.66□□□□□ -1.5
LINC00342-201ENST00000412393 SF3B6Q9Y3B4 125 aaKnown RBP5.66□□□□□ -1.5
LINC00342-201ENST00000412393 NUB1Q9Y5A7 615 aa5.66□□□□□ -1.5
LINC00342-201ENST00000412393 BACE2Q9Y5Z0 518 aa5.66□□□□□ -1.5
LINC00342-201ENST00000412393 MRFAP1Q9Y605 127 aa5.66□□□□□ -1.5
LINC00342-201ENST00000412393 TSC2P49815 1807 aa5.65□□□□□ -1.5
LINC00342-201ENST00000412393 TTC26A0AVF1 554 aa5.65□□□□□ -1.5
LINC00342-201ENST00000412393 LACTBL1A8MY62 500 aa5.65□□□□□ -1.5
LINC00342-201ENST00000412393 H7C4K7 107 aa5.65□□□□□ -1.5
LINC00342-201ENST00000412393 SYN3O14994 580 aa5.65□□□□□ -1.5
LINC00342-201ENST00000412393 OGTO15294 1046 aa5.65□□□□□ -1.5
LINC00342-201ENST00000412393 CCL16O15467 120 aa5.65□□□□□ -1.5
LINC00342-201ENST00000412393 XPOTO43592 962 aaKnown RBP5.65□□□□□ -1.5
LINC00342-201ENST00000412393 N4BP1O75113 896 aaKnown RBP5.65□□□□□ -1.5
LINC00342-201ENST00000412393 PPP6R2O75170 966 aa5.65□□□□□ -1.5
LINC00342-201ENST00000412393 PDGFBP01127 241 aaPredicted RBP5.65□□□□□ -1.5
LINC00342-201ENST00000412393 GAP43P17677 238 aa5.65□□□□□ -1.5
LINC00342-201ENST00000412393 NMT1P30419 496 aaKnown RBP5.65□□□□□ -1.5
LINC00342-201ENST00000412393 HOXA9P31269 272 aa5.65□□□□□ -1.5
LINC00342-201ENST00000412393 ELF1P32519 619 aa5.65□□□□□ -1.5
LINC00342-201ENST00000412393 TNFSF9P41273 254 aa5.65□□□□□ -1.5
LINC00342-201ENST00000412393 STAT6P42226 847 aa5.65□□□□□ -1.5
LINC00342-201ENST00000412393 AARSP49588 968 aaKnown RBP eCLIP5.65□□□□□ -1.5
LINC00342-201ENST00000412393 ARPP19P56211 112 aa5.65□□□□□ -1.5
LINC00342-201ENST00000412393 GTF2BQ00403 316 aa5.65□□□□□ -1.5
LINC00342-201ENST00000412393 FANCCQ00597 558 aa5.65□□□□□ -1.5
LINC00342-201ENST00000412393 POU4F1Q01851 419 aa5.65□□□□□ -1.5
LINC00342-201ENST00000412393 SPAG1Q07617 926 aa5.65□□□□□ -1.5
LINC00342-201ENST00000412393 TDGQ13569 410 aa5.65□□□□□ -1.5
LINC00342-201ENST00000412393 SLC39A14Q15043 492 aa5.65□□□□□ -1.5
LINC00342-201ENST00000412393 STK38Q15208 465 aa5.65□□□□□ -1.5
LINC00342-201ENST00000412393 ZC2HC1CQ53FD0 456 aaPredicted RBP5.65□□□□□ -1.5
LINC00342-201ENST00000412393 BEND6Q5SZJ8 279 aaPredicted RBP5.65□□□□□ -1.5
LINC00342-201ENST00000412393 EMC10Q5UCC4 262 aa5.65□□□□□ -1.5
LINC00342-201ENST00000412393 WDR93Q6P2C0 686 aa5.65□□□□□ -1.5
LINC00342-201ENST00000412393 RSPO2Q6UXX9 243 aaPredicted RBP5.65□□□□□ -1.5
LINC00342-201ENST00000412393 ZNF662Q6ZS27 426 aa5.65□□□□□ -1.5
LINC00342-201ENST00000412393 GET4Q7L5D6 327 aaPredicted RBP5.65□□□□□ -1.5
LINC00342-201ENST00000412393 GRASPQ7Z6J2 395 aaPredicted RBP5.65□□□□□ -1.5
LINC00342-201ENST00000412393 SFR1Q86XK3 245 aa5.65□□□□□ -1.5
LINC00342-201ENST00000412393 LZTR1Q8N653 840 aa5.65□□□□□ -1.5
LINC00342-201ENST00000412393 CEP112Q8N8E3 955 aa5.65□□□□□ -1.5
LINC00342-201ENST00000412393 APPL2Q8NEU8 664 aa5.65□□□□□ -1.5
LINC00342-201ENST00000412393 SLC7A14Q8TBB6 771 aa5.65□□□□□ -1.5
LINC00342-201ENST00000412393 SMARCE1Q969G3 411 aa5.65□□□□□ -1.5
LINC00342-201ENST00000412393 PANX2Q96RD6 677 aa5.65□□□□□ -1.5
LINC00342-201ENST00000412393 FIZ1Q96SL8 496 aa5.65□□□□□ -1.5
LINC00342-201ENST00000412393 NCAPGQ9BPX3 1015 aa5.65□□□□□ -1.5
LINC00342-201ENST00000412393 MSTO1Q9BUK6 570 aa5.65□□□□□ -1.5
LINC00342-201ENST00000412393 NAA15Q9BXJ9 866 aaKnown RBP5.65□□□□□ -1.5
LINC00342-201ENST00000412393 PARD6BQ9BYG5 372 aa5.65□□□□□ -1.5
LINC00342-201ENST00000412393 XPO4Q9C0E2 1151 aaKnown RBP5.65□□□□□ -1.5
LINC00342-201ENST00000412393 GOLPH3LQ9H4A5 285 aa5.65□□□□□ -1.5
LINC00342-201ENST00000412393 RPF1Q9H9Y2 349 aaKnown RBP5.65□□□□□ -1.5
LINC00342-201ENST00000412393 PLEKHA5Q9HAU0 1116 aa5.65□□□□□ -1.5
LINC00342-201ENST00000412393 CD248Q9HCU0 757 aa5.65□□□□□ -1.5
LINC00342-201ENST00000412393 IGSF9Q9P2J2 1179 aa5.65□□□□□ -1.5
LINC00342-201ENST00000412393 TUBGCP4Q9UGJ1 667 aa5.65□□□□□ -1.5
LINC00342-201ENST00000412393 UBQLN1Q9UMX0 589 aaKnown RBP5.65□□□□□ -1.5
LINC00342-201ENST00000412393 PCDHA7Q9UN72 937 aa5.65□□□□□ -1.5
LINC00342-201ENST00000412393 TESMINQ9Y4I5 508 aa5.65□□□□□ -1.5
LINC00342-201ENST00000412393 CDY1Q9Y6F8 540 aa5.65□□□□□ -1.5
LINC00342-201ENST00000412393 DENND4CQ5VZ89 1909 aa5.65□□□□□ -1.51
LINC00342-201ENST00000412393 A0A0B4J269 797 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 MYMKA6NI61 221 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 TISP43B9A030 160 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 ANKRD63C9JTQ0 380 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 PRRG1O14668 218 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 SHOXO15266 292 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 FAM189A1O60320 539 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 ERLIN1O75477 346 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 SMC2O95347 1197 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 LRG1P02750 347 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 ADRB2P07550 413 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 POU2F2P09086 479 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 LAMP2P13473 410 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 CYP3A5P20815 502 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 MCM3P25205 808 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 OAS2P29728 719 aaKnown RBP5.64□□□□□ -1.51
LINC00342-201ENST00000412393 AVPR2P30518 371 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 LRPAP1P30533 357 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 SELENOPP49908 381 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 GUCY2FP51841 1108 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 VCPP55072 806 aaKnown RBP5.64□□□□□ -1.51
LINC00342-201ENST00000412393 NTHL1P78549 312 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 ROR1Q01973 937 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 MRPL58Q14197 206 aaKnown RBP5.64□□□□□ -1.51
LINC00342-201ENST00000412393 ZBTB6Q15916 424 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 LONRF2Q1L5Z9 754 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 CTXN3Q4LDR2 81 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 ZBTB41Q5SVQ8 909 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 JADE1Q6IE81 842 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 SLFN12LQ6IEE8 588 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 SLC8B1Q6J4K2 584 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 ZNF280DQ6N043 979 aa5.64□□□□□ -1.51
LINC00342-201ENST00000412393 SLC39A4Q6P5W5 647 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms