RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 REXO5Q96IC2 774 aaKnown RBP2.94□□□□□ -1.94
RNU6-1140P-201ENST00000410517 AIFM2Q9BRQ8 373 aa2.94□□□□□ -1.94
RNU6-1140P-201ENST00000410517 C17orf80Q9BSJ5 609 aa2.94□□□□□ -1.94
RNU6-1140P-201ENST00000410517 ADGRE3Q9BY15 652 aa2.94□□□□□ -1.94
RNU6-1140P-201ENST00000410517 AMBRA1Q9C0C7 1298 aa2.94□□□□□ -1.94
RNU6-1140P-201ENST00000410517 MAGEH1Q9H213 219 aa2.94□□□□□ -1.94
RNU6-1140P-201ENST00000410517 SMOC2Q9H3U7 446 aa2.94□□□□□ -1.94
RNU6-1140P-201ENST00000410517 ELAC1Q9H777 363 aaKnown RBP2.94□□□□□ -1.94
RNU6-1140P-201ENST00000410517 GBA2Q9HCG7 927 aaPredicted RBP2.94□□□□□ -1.94
RNU6-1140P-201ENST00000410517 ARHGEF3Q9NR81 526 aa2.94□□□□□ -1.94
RNU6-1140P-201ENST00000410517 RASSF1Q9NS23 344 aa2.94□□□□□ -1.94
RNU6-1140P-201ENST00000410517 ANKFY1Q9P2R3 1169 aa2.94□□□□□ -1.94
RNU6-1140P-201ENST00000410517 ZNF69Q9UC07 566 aa2.94□□□□□ -1.94
RNU6-1140P-201ENST00000410517 PGAP2Q9UHJ9 254 aa2.94□□□□□ -1.94
RNU6-1140P-201ENST00000410517 MAP3K2Q9Y2U5 619 aa2.94□□□□□ -1.94
RNU6-1140P-201ENST00000410517 PCDHB7Q9Y5E2 793 aa2.94□□□□□ -1.94
RNU6-1140P-201ENST00000410517 COL15A1P39059 1388 aa2.94□□□□□ -1.94
RNU6-1140P-201ENST00000410517 DHX57Q6P158 1386 aaKnown RBP2.94□□□□□ -1.94
RNU6-1140P-201ENST00000410517 ANKRD30BQ9BXX2 1392 aa2.94□□□□□ -1.94
RNU6-1140P-201ENST00000410517 SALL3Q9BXA9 1300 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 VPS8Q8N3P4 1428 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 CEP152O94986 1710 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 XIRP1Q702N8 1843 aaKnown RBP2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 BRD4O60885 1362 aaPredicted RBP2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 ABCC11Q96J66 1382 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 A1L4Q6 167 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 UNC119BA6NIH7 251 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 UBE2Q2LH0YL09 131 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 hCG_1984214I3L0E3 225 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 J3KTA2 159 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 EXOC5O00471 708 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 TRIM38O00635 465 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 CES2O00748 559 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 PPM1DO15297 605 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 RNF8O76064 485 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 TJP3O95049 919 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 TFRCP02786 760 aaKnown RBP2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 ALDOAP04075 364 aaKnown RBP2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 CSF1RP07333 972 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 ANXA6P08133 673 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 CHRM2P08172 466 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 EGR2P11161 476 aaPredicted RBP2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 PECAM1P16284 738 aaPredicted RBP2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 ZFP36P26651 326 aaKnown RBP2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 CST5P28325 142 aaPredicted RBP2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 SERPINA4P29622 427 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 GKP32189 559 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 ARL1P40616 181 aaPredicted RBP2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 GRIA3P42263 894 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 TOB1P50616 345 aaPredicted RBP2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 ACTR2P61160 394 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 VAMP2P63027 116 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 SCAPQ12770 1279 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 FOXD4Q12950 439 aaPredicted RBP2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 EIF2B5Q13144 721 aaKnown RBP2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 SEMA3BQ13214 749 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 TP53BP2Q13625 1128 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 KCNAB1Q14722 419 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 CERKLQ49MI3 558 aaPredicted RBP2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 AARS2Q5JTZ9 985 aaKnown RBP2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 ABLIM2Q6H8Q1 611 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 TMEM88Q6PEY1 159 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 VSTM1Q6UX27 236 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 CLEC9AQ6UXN8 241 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 Q6ZNX1 250 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 PTCHD4Q6ZW05 846 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 SLC29A4Q7RTT9 530 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 TRABD2AQ86V40 505 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 ZNF280BQ86YH2 543 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 SFTPA1Q8IWL2 248 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 CLASRPQ8N2M8 674 aaKnown RBP2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 TMEM57Q8N5G2 664 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 DDX51Q8N8A6 666 aaKnown RBP eCLIP2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 PNPLA1Q8N8W4 532 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 Q8NA96 180 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 NAXEQ8NCW5 288 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 SRFBP1Q8NEF9 429 aaKnown RBP2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 SLC30A5Q8TAD4 765 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 MYCBPAPQ8TBZ2 947 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 CAGE1Q8TC20 777 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 TMEM171Q8WVE6 324 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 HMGB4Q8WW32 186 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 GLG1Q92896 1179 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 SH3KBP1Q96B97 665 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 HS6ST2Q96MM7 605 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 TRAPPC9Q96Q05 1148 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 FYTTD1Q96QD9 318 aaKnown RBP2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 AMFRQ9UKV5 643 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 MRPS17Q9Y2R5 130 aaKnown RBP2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 SNX14Q9Y5W7 946 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 LRRFIP2Q9Y608 721 aaKnown RBP2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 EPN1Q9Y6I3 576 aaPredicted RBP2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 IQGAP3Q86VI3 1631 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 TECPR2O15040 1411 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 TNS3Q68CZ2 1445 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 SPATA31A5Q5VU36 1347 aa2.93□□□□□ -1.94
RNU6-1140P-201ENST00000410517 SPATA31A7Q8IWB4 1347 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms