RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 SPATS2Q86XZ4 545 aaKnown RBP13.42□□□□□ -0.26
CHRNA1-203ENST00000409219 AHI1Q8N157 1196 aa13.42□□□□□ -0.26
CHRNA1-203ENST00000409219 OXR1Q8N573 874 aa13.42□□□□□ -0.26
CHRNA1-203ENST00000409219 OR2T34Q8NGX1 318 aa13.42□□□□□ -0.26
CHRNA1-203ENST00000409219 WFDC5Q8TCV5 224 aa13.42□□□□□ -0.26
CHRNA1-203ENST00000409219 GANCQ8TET4 914 aa13.42□□□□□ -0.26
CHRNA1-203ENST00000409219 CYFIP2Q96F07 1278 aa13.42□□□□□ -0.26
CHRNA1-203ENST00000409219 MYO19Q96H55 970 aa13.42□□□□□ -0.26
CHRNA1-203ENST00000409219 TRIM4Q9C037 500 aa13.42□□□□□ -0.26
CHRNA1-203ENST00000409219 NEUROG2Q9H2A3 272 aa13.42□□□□□ -0.26
CHRNA1-203ENST00000409219 MARCH2Q9P0N8 246 aa13.42□□□□□ -0.26
CHRNA1-203ENST00000409219 SLC12A8A0AV02 714 aa13.41□□□□□ -0.26
CHRNA1-203ENST00000409219 TLR4O00206 839 aa13.41□□□□□ -0.26
CHRNA1-203ENST00000409219 MID1O15344 667 aa13.41□□□□□ -0.26
CHRNA1-203ENST00000409219 KLK10O43240 276 aa13.41□□□□□ -0.26
CHRNA1-203ENST00000409219 STX6O43752 255 aa13.41□□□□□ -0.26
CHRNA1-203ENST00000409219 SDC3O75056 442 aa13.41□□□□□ -0.26
CHRNA1-203ENST00000409219 ERVPABLB-1P60509 514 aa13.41□□□□□ -0.26
CHRNA1-203ENST00000409219 CST6Q15828 149 aa13.41□□□□□ -0.26
CHRNA1-203ENST00000409219 KIAA1614Q5VZ46 1190 aa13.41□□□□□ -0.26
CHRNA1-203ENST00000409219 NELFCDQ8IXH7 590 aa13.41□□□□□ -0.26
CHRNA1-203ENST00000409219 PLD4Q96BZ4 506 aa13.41□□□□□ -0.26
CHRNA1-203ENST00000409219 SERAC1Q96JX3 654 aa13.41□□□□□ -0.26
CHRNA1-203ENST00000409219 PANK2Q9BZ23 570 aa13.41□□□□□ -0.26
CHRNA1-203ENST00000409219 ERVMER34-1Q9H9K5 563 aa13.41□□□□□ -0.26
CHRNA1-203ENST00000409219 ASCL3Q9NQ33 180 aa13.41□□□□□ -0.26
CHRNA1-203ENST00000409219 SUN2Q9UH99 717 aa13.41□□□□□ -0.26
CHRNA1-203ENST00000409219 SSUH2Q9Y2M2 353 aa13.41□□□□□ -0.26
CHRNA1-203ENST00000409219 COL27A1Q8IZC6 1860 aaPredicted RBP13.4□□□□□ -0.26
CHRNA1-203ENST00000409219 UBE4BO95155 1302 aa13.4□□□□□ -0.26
CHRNA1-203ENST00000409219 LRRC72A6NJI9 287 aa13.4□□□□□ -0.26
CHRNA1-203ENST00000409219 TRIM38O00635 465 aa13.4□□□□□ -0.26
CHRNA1-203ENST00000409219 SIGLEC6O43699 453 aa13.4□□□□□ -0.26
CHRNA1-203ENST00000409219 SIN3BO75182 1162 aa13.4□□□□□ -0.26
CHRNA1-203ENST00000409219 P4HA1P13674 534 aa13.4□□□□□ -0.26
CHRNA1-203ENST00000409219 CCR5P51681 352 aa13.4□□□□□ -0.26
CHRNA1-203ENST00000409219 SGSHP51688 502 aa13.4□□□□□ -0.26
CHRNA1-203ENST00000409219 CLDN10P78369 228 aa13.4□□□□□ -0.26
CHRNA1-203ENST00000409219 E2F1Q01094 437 aa13.4□□□□□ -0.26
CHRNA1-203ENST00000409219 FAM26FQ5R3K3 315 aa13.4□□□□□ -0.26
CHRNA1-203ENST00000409219 SPOPLQ6IQ16 392 aa13.4□□□□□ -0.26
CHRNA1-203ENST00000409219 C12orf56Q8IXR9 622 aa13.4□□□□□ -0.26
CHRNA1-203ENST00000409219 LSMEM2Q8N112 164 aa13.4□□□□□ -0.26
CHRNA1-203ENST00000409219 PARD3BQ8TEW8 1205 aa13.4□□□□□ -0.26
CHRNA1-203ENST00000409219 STRIP2Q9ULQ0 834 aa13.4□□□□□ -0.26
CHRNA1-203ENST00000409219 FZD4Q9ULV1 537 aa13.4□□□□□ -0.26
CHRNA1-203ENST00000409219 DOCK9Q9BZ29 2069 aa13.4□□□□□ -0.27
CHRNA1-203ENST00000409219 K7ENP7 123 aa13.39□□□□□ -0.27
CHRNA1-203ENST00000409219 USP12O75317 370 aa13.39□□□□□ -0.27
CHRNA1-203ENST00000409219 RNASEH2AO75792 299 aaKnown RBP13.39□□□□□ -0.27
CHRNA1-203ENST00000409219 KIF20AO95235 890 aa13.39□□□□□ -0.27
CHRNA1-203ENST00000409219 ATP5BP06576 529 aaKnown RBP13.39□□□□□ -0.27
CHRNA1-203ENST00000409219 CD70P32970 193 aa13.39□□□□□ -0.27
CHRNA1-203ENST00000409219 AP3M2P53677 418 aa13.39□□□□□ -0.27
CHRNA1-203ENST00000409219 ADPRHP54922 357 aa13.39□□□□□ -0.27
CHRNA1-203ENST00000409219 SNRPFP62306 86 aaKnown RBP13.39□□□□□ -0.27
CHRNA1-203ENST00000409219 PPP2CBP62714 309 aa13.39□□□□□ -0.27
CHRNA1-203ENST00000409219 PPP2CAP67775 309 aa13.39□□□□□ -0.27
CHRNA1-203ENST00000409219 INCA1Q0VD86 236 aa13.39□□□□□ -0.27
CHRNA1-203ENST00000409219 TRIP4Q15650 581 aaPredicted RBP13.39□□□□□ -0.27
CHRNA1-203ENST00000409219 CDCP2Q5VXM1 449 aa13.39□□□□□ -0.27
CHRNA1-203ENST00000409219 INO80CQ6PI98 192 aaPredicted RBP13.39□□□□□ -0.27
CHRNA1-203ENST00000409219 RSRC2Q7L4I2 434 aaKnown RBP13.39□□□□□ -0.27
CHRNA1-203ENST00000409219 PDILTQ8N807 584 aa13.39□□□□□ -0.27
CHRNA1-203ENST00000409219 VCPIP1Q96JH7 1222 aa13.39□□□□□ -0.27
CHRNA1-203ENST00000409219 TMX3Q96JJ7 454 aa13.39□□□□□ -0.27
CHRNA1-203ENST00000409219 DPH1Q9BZG8 443 aa13.39□□□□□ -0.27
CHRNA1-203ENST00000409219 IL17BQ9UHF5 180 aa13.39□□□□□ -0.27
CHRNA1-203ENST00000409219 NBPF19A0A087WUL8 3843 aa13.38□□□□□ -0.27
CHRNA1-203ENST00000409219 LATO43561 262 aa13.38□□□□□ -0.27
CHRNA1-203ENST00000409219 EXOC3O60645 756 aa13.38□□□□□ -0.27
CHRNA1-203ENST00000409219 ASS1P00966 412 aaKnown RBP13.38□□□□□ -0.27
CHRNA1-203ENST00000409219 POLR2EP19388 210 aaKnown RBP13.38□□□□□ -0.27
CHRNA1-203ENST00000409219 TRIM21P19474 475 aaKnown RBP13.38□□□□□ -0.27
CHRNA1-203ENST00000409219 LSSP48449 732 aa13.38□□□□□ -0.27
CHRNA1-203ENST00000409219 ZNF445P59923 1031 aa13.38□□□□□ -0.27
CHRNA1-203ENST00000409219 DAB2P98082 770 aa13.38□□□□□ -0.27
CHRNA1-203ENST00000409219 SGSM1Q2NKQ1 1148 aa13.38□□□□□ -0.27
CHRNA1-203ENST00000409219 HNRNPA1L2Q32P51 320 aaKnown RBP13.38□□□□□ -0.27
CHRNA1-203ENST00000409219 SLC45A4Q5BKX6 768 aa13.38□□□□□ -0.27
CHRNA1-203ENST00000409219 PPP1R26Q5T8A7 1209 aaPredicted RBP13.38□□□□□ -0.27
CHRNA1-203ENST00000409219 NAPEPLDQ6IQ20 393 aa13.38□□□□□ -0.27
CHRNA1-203ENST00000409219 MMAAQ8IVH4 418 aaKnown RBP13.38□□□□□ -0.27
CHRNA1-203ENST00000409219 SNX21Q969T3 373 aa13.38□□□□□ -0.27
CHRNA1-203ENST00000409219 DEPDC7Q96QD5 511 aa13.38□□□□□ -0.27
CHRNA1-203ENST00000409219 OMDQ99983 421 aa13.38□□□□□ -0.27
CHRNA1-203ENST00000409219 NT5C1AQ9BXI3 368 aa13.38□□□□□ -0.27
CHRNA1-203ENST00000409219 DUSP16Q9BY84 665 aa13.38□□□□□ -0.27
CHRNA1-203ENST00000409219 TNMDQ9H2S6 317 aa13.38□□□□□ -0.27
CHRNA1-203ENST00000409219 POLR1BQ9H9Y6 1135 aa13.38□□□□□ -0.27
CHRNA1-203ENST00000409219 STOML2Q9UJZ1 356 aa13.38□□□□□ -0.27
CHRNA1-203ENST00000409219 RELNP78509 3460 aa13.37□□□□□ -0.27
CHRNA1-203ENST00000409219 RNASEH1O60930 286 aaKnown RBP13.37□□□□□ -0.27
CHRNA1-203ENST00000409219 YWHAGP61981 247 aaKnown RBP eCLIP13.37□□□□□ -0.27
CHRNA1-203ENST00000409219 ASIC1P78348 528 aa13.37□□□□□ -0.27
CHRNA1-203ENST00000409219 DLG4P78352 724 aa13.37□□□□□ -0.27
CHRNA1-203ENST00000409219 NFATC3Q12968 1075 aa13.37□□□□□ -0.27
CHRNA1-203ENST00000409219 ZNF211Q13398 564 aaPredicted RBP13.37□□□□□ -0.27
CHRNA1-203ENST00000409219 ZACNQ401N2 412 aa13.37□□□□□ -0.27
CHRNA1-203ENST00000409219 ARHGAP18Q8N392 663 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms