RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 PPP1R10Q96QC0 940 aaKnown RBP18.07■□□□□ 0.48
SMPD4-202ENST00000409031 F8VP50 259 aa18.07■□□□□ 0.48
SMPD4-202ENST00000409031 FANCGO15287 622 aa18.07■□□□□ 0.48
SMPD4-202ENST00000409031 PDE9AO76083 593 aa18.07■□□□□ 0.48
SMPD4-202ENST00000409031 CREB1P16220 341 aa18.07■□□□□ 0.48
SMPD4-202ENST00000409031 KRT20P35900 424 aa18.07■□□□□ 0.48
SMPD4-202ENST00000409031 VAC14Q08AM6 782 aa18.07■□□□□ 0.48
SMPD4-202ENST00000409031 CSHL1Q14406 222 aa18.07■□□□□ 0.48
SMPD4-202ENST00000409031 FAM49AQ9H0Q0 323 aaPredicted RBP18.07■□□□□ 0.48
SMPD4-202ENST00000409031 TRIM17Q9Y577 477 aa18.07■□□□□ 0.48
SMPD4-202ENST00000409031 TPP1O14773 563 aa18.06■□□□□ 0.48
SMPD4-202ENST00000409031 TSC22D2O75157 780 aa18.06■□□□□ 0.48
SMPD4-202ENST00000409031 MT-CO1P00395 513 aa18.06■□□□□ 0.48
SMPD4-202ENST00000409031 KDELR1P24390 212 aa18.06■□□□□ 0.48
SMPD4-202ENST00000409031 PEX2P28328 305 aa18.06■□□□□ 0.48
SMPD4-202ENST00000409031 PURAQ00577 322 aaKnown RBP18.06■□□□□ 0.48
SMPD4-202ENST00000409031 FUT2Q10981 343 aa18.06■□□□□ 0.48
SMPD4-202ENST00000409031 MAMLD1Q13495 774 aa18.06■□□□□ 0.48
SMPD4-202ENST00000409031 KCTD19Q17RG1 926 aaPredicted RBP18.06■□□□□ 0.48
SMPD4-202ENST00000409031 VPS37AQ8NEZ2 397 aa18.06■□□□□ 0.48
SMPD4-202ENST00000409031 HPDLQ96IR7 371 aa18.06■□□□□ 0.48
SMPD4-202ENST00000409031 XPNPEP3Q9NQH7 507 aa18.06■□□□□ 0.48
SMPD4-202ENST00000409031 ZDHHC18Q9NUE0 388 aa18.06■□□□□ 0.48
SMPD4-202ENST00000409031 TCRBV9S1A1TA0A576 114 aa18.06■□□□□ 0.48
SMPD4-202ENST00000409031 VEGFAP15692 232 aaPredicted RBP18.06■□□□□ 0.48
SMPD4-202ENST00000409031 HPS6Q86YV9 775 aa18.06■□□□□ 0.48
SMPD4-202ENST00000409031 SIX5Q8N196 739 aa18.06■□□□□ 0.48
SMPD4-202ENST00000409031 RCN3Q96D15 328 aa18.06■□□□□ 0.48
SMPD4-202ENST00000409031 TCEA3O75764 348 aa18.06■□□□□ 0.48
SMPD4-202ENST00000409031 SLITRK3O94933 977 aa18.06■□□□□ 0.48
SMPD4-202ENST00000409031 CRABP2P29373 138 aa18.06■□□□□ 0.48
SMPD4-202ENST00000409031 NR2C2P49116 596 aa18.06■□□□□ 0.48
SMPD4-202ENST00000409031 SPIDRQ14159 915 aa18.06■□□□□ 0.48
SMPD4-202ENST00000409031 MAPRE1Q15691 268 aaKnown RBP18.06■□□□□ 0.48
SMPD4-202ENST00000409031 ASTE1Q2TB18 679 aaPredicted RBP18.06■□□□□ 0.48
SMPD4-202ENST00000409031 ANGEL2Q5VTE6 544 aaKnown RBP18.06■□□□□ 0.48
SMPD4-202ENST00000409031 CACHD1Q5VU97 1274 aa18.06■□□□□ 0.48
SMPD4-202ENST00000409031 BTBD8Q5XKL5 378 aa18.06■□□□□ 0.48
SMPD4-202ENST00000409031 HHIPL2Q6UWX4 724 aa18.06■□□□□ 0.48
SMPD4-202ENST00000409031 AMIGO2Q86SJ2 522 aa18.06■□□□□ 0.48
SMPD4-202ENST00000409031 THEM5Q8N1Q8 247 aa18.06■□□□□ 0.48
SMPD4-202ENST00000409031 C8orf4Q9NR00 106 aa18.06■□□□□ 0.48
SMPD4-202ENST00000409031 ABCB10Q9NRK6 738 aa18.06■□□□□ 0.48
SMPD4-202ENST00000409031 AP4E1Q9UPM8 1137 aa18.06■□□□□ 0.48
SMPD4-202ENST00000409031 GPC6Q9Y625 555 aaPredicted RBP18.06■□□□□ 0.48
SMPD4-202ENST00000409031 CYP2F1P24903 491 aa18.06■□□□□ 0.48
SMPD4-202ENST00000409031 FOXN2P32314 431 aa18.06■□□□□ 0.48
SMPD4-202ENST00000409031 ATF7IP2Q5U623 682 aa18.06■□□□□ 0.48
SMPD4-202ENST00000409031 MIER2Q8N344 545 aa18.06■□□□□ 0.48
SMPD4-202ENST00000409031 C10orf82Q8WW14 230 aa18.06■□□□□ 0.48
SMPD4-202ENST00000409031 PLA2G4CQ9UP65 541 aa18.06■□□□□ 0.48
SMPD4-202ENST00000409031 EIF4BP23588 611 aaKnown RBP18.05■□□□□ 0.48
SMPD4-202ENST00000409031 MGAT1P26572 445 aa18.05■□□□□ 0.48
SMPD4-202ENST00000409031 NAGLUP54802 743 aa18.05■□□□□ 0.48
SMPD4-202ENST00000409031 DDR2Q16832 855 aa18.05■□□□□ 0.48
SMPD4-202ENST00000409031 BMT2Q1RMZ1 405 aa18.05■□□□□ 0.48
SMPD4-202ENST00000409031 FAM45BPQ6NSW5 357 aa18.05■□□□□ 0.48
SMPD4-202ENST00000409031 MRNIPQ6NTE8 343 aa18.05■□□□□ 0.48
SMPD4-202ENST00000409031 BBS12Q6ZW61 710 aa18.05■□□□□ 0.48
SMPD4-202ENST00000409031 CHSY1Q86X52 802 aa18.05■□□□□ 0.48
SMPD4-202ENST00000409031 SPATA17Q96L03 361 aa18.05■□□□□ 0.48
SMPD4-202ENST00000409031 HPS4Q9NQG7 708 aa18.05■□□□□ 0.48
SMPD4-202ENST00000409031 PLLPQ9Y342 182 aa18.05■□□□□ 0.48
SMPD4-202ENST00000409031 CLUHO75153 1309 aa18.05■□□□□ 0.48
SMPD4-202ENST00000409031 SNRPB2P08579 225 aaKnown RBP18.05■□□□□ 0.48
SMPD4-202ENST00000409031 ARP10275 920 aa18.05■□□□□ 0.48
SMPD4-202ENST00000409031 PIK3R1P27986 724 aa18.05■□□□□ 0.48
SMPD4-202ENST00000409031 PCSK7Q16549 785 aa18.05■□□□□ 0.48
SMPD4-202ENST00000409031 HDDC2Q7Z4H3 204 aa18.05■□□□□ 0.48
SMPD4-202ENST00000409031 AKAP14Q86UN6 197 aa18.05■□□□□ 0.48
SMPD4-202ENST00000409031 C4orf19Q8IY42 314 aa18.05■□□□□ 0.48
SMPD4-202ENST00000409031 FAM9CQ8IZT9 166 aa18.05■□□□□ 0.48
SMPD4-202ENST00000409031 ZBTB8BQ8NAP8 495 aaPredicted RBP18.05■□□□□ 0.48
SMPD4-202ENST00000409031 PDPRQ8NCN5 879 aa18.05■□□□□ 0.48
SMPD4-202ENST00000409031 RAP2CQ9Y3L5 183 aa18.05■□□□□ 0.48
SMPD4-202ENST00000409031 IPPQ9Y573 584 aa18.05■□□□□ 0.48
SMPD4-202ENST00000409031 RHOBTB1O94844 696 aa18.05■□□□□ 0.48
SMPD4-202ENST00000409031 METTL21CQ5VZV1 264 aa18.05■□□□□ 0.48
SMPD4-202ENST00000409031 TMEM26Q6ZUK4 368 aa18.05■□□□□ 0.48
SMPD4-202ENST00000409031 MTMR12Q9C0I1 747 aa18.05■□□□□ 0.48
SMPD4-202ENST00000409031 TRIM45Q9H8W5 580 aaPredicted RBP18.05■□□□□ 0.48
SMPD4-202ENST00000409031 MYOM1P52179 1685 aa18.05■□□□□ 0.48
SMPD4-202ENST00000409031 HS6ST1O60243 411 aa18.05■□□□□ 0.48
SMPD4-202ENST00000409031 LINGO3P0C6S8 592 aa18.05■□□□□ 0.48
SMPD4-202ENST00000409031 HSMCR30P0CW71 290 aa18.05■□□□□ 0.48
SMPD4-202ENST00000409031 TNK2Q07912 1038 aa18.05■□□□□ 0.48
SMPD4-202ENST00000409031 TIMM50Q3ZCQ8 353 aa18.05■□□□□ 0.48
SMPD4-202ENST00000409031 PDZK1Q5T2W1 519 aa18.05■□□□□ 0.48
SMPD4-202ENST00000409031 CDC42EP5Q6NZY7 148 aa18.05■□□□□ 0.48
SMPD4-202ENST00000409031 CDV3Q9UKY7 258 aaKnown RBP18.05■□□□□ 0.48
SMPD4-202ENST00000409031 KIF20BQ96Q89 1820 aa18.05■□□□□ 0.48
SMPD4-202ENST00000409031 NWD1Q149M9 1564 aa18.05■□□□□ 0.48
SMPD4-202ENST00000409031 TRIM43BA6NCK2 446 aa18.04■□□□□ 0.48
SMPD4-202ENST00000409031 IER5Q5VY09 327 aa18.04■□□□□ 0.48
SMPD4-202ENST00000409031 ZDHHC24Q6UX98 284 aa18.04■□□□□ 0.48
SMPD4-202ENST00000409031 KCNMB4Q86W47 210 aa18.04■□□□□ 0.48
SMPD4-202ENST00000409031 KRT73Q86Y46 540 aa18.04■□□□□ 0.48
SMPD4-202ENST00000409031 PSMA8Q8TAA3 256 aa18.04■□□□□ 0.48
SMPD4-202ENST00000409031 ENKURQ8TC29 256 aa18.04■□□□□ 0.48
SMPD4-202ENST00000409031 SLC44A1Q8WWI5 657 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms