RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 PILRBQ9UKJ0 227 aa9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 HCN2Q9UL51 889 aa9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 STAP1Q9ULZ2 295 aa9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 SCML1Q9UN30 329 aa9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 NAALADL1Q9UQQ1 740 aa9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 NCOR2Q9Y618 2525 aa9.42□□□□□ -0.9
SNORD88A-201ENST00000408314 ANTXRLA6NF34 631 aa9.41□□□□□ -0.9
SNORD88A-201ENST00000408314 BECN2A8MW95 431 aa9.41□□□□□ -0.9
SNORD88A-201ENST00000408314 H0Y626 953 aa9.41□□□□□ -0.9
SNORD88A-201ENST00000408314 LUC7L3O95232 432 aaKnown RBP9.41□□□□□ -0.9
SNORD88A-201ENST00000408314 MOCS2O96007 188 aaPredicted RBP9.41□□□□□ -0.9
SNORD88A-201ENST00000408314 IGLV3-19P01714 112 aa9.41□□□□□ -0.9
SNORD88A-201ENST00000408314 DNTTP04053 509 aa9.41□□□□□ -0.9
SNORD88A-201ENST00000408314 FYNP06241 537 aa9.41□□□□□ -0.9
SNORD88A-201ENST00000408314 SERPINF2P08697 491 aa9.41□□□□□ -0.9
SNORD88A-201ENST00000408314 KCNA4P22459 653 aa9.41□□□□□ -0.9
SNORD88A-201ENST00000408314 SCNN1AP37088 669 aa9.41□□□□□ -0.9
SNORD88A-201ENST00000408314 NNMTP40261 264 aa9.41□□□□□ -0.9
SNORD88A-201ENST00000408314 PTGER3P43115 390 aa9.41□□□□□ -0.9
SNORD88A-201ENST00000408314 SULT2A1Q06520 285 aa9.41□□□□□ -0.9
SNORD88A-201ENST00000408314 CAMK2GQ13555 558 aaPredicted RBP9.41□□□□□ -0.9
SNORD88A-201ENST00000408314 DCAF6Q58WW2 860 aa9.41□□□□□ -0.9
SNORD88A-201ENST00000408314 TCP11X2Q5H9J9 407 aa9.41□□□□□ -0.9
SNORD88A-201ENST00000408314 MS4A13Q5J8X5 152 aa9.41□□□□□ -0.9
SNORD88A-201ENST00000408314 MBLAC2Q68D91 279 aa9.41□□□□□ -0.9
SNORD88A-201ENST00000408314 OR6B2Q6IFH4 312 aa9.41□□□□□ -0.9
SNORD88A-201ENST00000408314 TCEAL6Q6IPX3 200 aa9.41□□□□□ -0.9
SNORD88A-201ENST00000408314 GJB7Q6PEY0 223 aa9.41□□□□□ -0.9
SNORD88A-201ENST00000408314 SASS6Q6UVJ0 657 aa9.41□□□□□ -0.9
SNORD88A-201ENST00000408314 SLC26A9Q7LBE3 791 aa9.41□□□□□ -0.9
SNORD88A-201ENST00000408314 KIAA0907Q7Z7F0 614 aaPredicted RBP9.41□□□□□ -0.9
SNORD88A-201ENST00000408314 ZNF677Q86XU0 584 aa9.41□□□□□ -0.9
SNORD88A-201ENST00000408314 FAM71AQ8IYT1 594 aa9.41□□□□□ -0.9
SNORD88A-201ENST00000408314 RGL4Q8IZJ4 473 aa9.41□□□□□ -0.9
SNORD88A-201ENST00000408314 CARNMT1Q8N4J0 409 aa9.41□□□□□ -0.9
SNORD88A-201ENST00000408314 HDDC3Q8N4P3 179 aa9.41□□□□□ -0.9
SNORD88A-201ENST00000408314 ZNF397Q8NF99 534 aaPredicted RBP9.41□□□□□ -0.9
SNORD88A-201ENST00000408314 TCEAL3Q969E4 200 aa9.41□□□□□ -0.9
SNORD88A-201ENST00000408314 ZNF419Q96HQ0 510 aaPredicted RBP9.41□□□□□ -0.9
SNORD88A-201ENST00000408314 SLC2A13Q96QE2 648 aa9.41□□□□□ -0.9
SNORD88A-201ENST00000408314 SMOC1Q9H4F8 434 aa9.41□□□□□ -0.9
SNORD88A-201ENST00000408314 SLC32A1Q9H598 525 aa9.41□□□□□ -0.9
SNORD88A-201ENST00000408314 ITM2CQ9NQX7 267 aa9.41□□□□□ -0.9
SNORD88A-201ENST00000408314 ANO10Q9NW15 660 aa9.41□□□□□ -0.9
SNORD88A-201ENST00000408314 DDIT4Q9NX09 232 aa9.41□□□□□ -0.9
SNORD88A-201ENST00000408314 KIAA1522Q9P206 1035 aaPredicted RBP9.41□□□□□ -0.9
SNORD88A-201ENST00000408314 STIM2Q9P246 746 aa9.41□□□□□ -0.9
SNORD88A-201ENST00000408314 DCHS1Q96JQ0 3298 aa9.41□□□□□ -0.9
SNORD88A-201ENST00000408314 ABCA7Q8IZY2 2146 aa9.41□□□□□ -0.9
SNORD88A-201ENST00000408314 CKAP5Q14008 2032 aa9.41□□□□□ -0.9
SNORD88A-201ENST00000408314 CNOT1A5YKK6 2376 aaKnown RBP9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 A0A1B0GVM2 712 aa9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 TCAF2A6NFQ2 919 aa9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 C4orf47A7E2U8 309 aa9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 KCNU1A8MYU2 1149 aa9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 WASH3PC4AMC7 463 aa9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 DAB1O75553 588 aa9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 GABBR2O75899 941 aa9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 F9P00740 461 aa9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 CALCAP01258 141 aa9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 IGLV3-25P01717 112 aa9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 SRPRAP08240 638 aaKnown RBP9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 UCHL3P15374 230 aa9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 CSRP1P21291 193 aaKnown RBP9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 TACR2P21452 398 aa9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 ITPKAP23677 461 aa9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 PRKCHP24723 683 aa9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 SLC6A4P31645 630 aa9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 NOS2P35228 1153 aa9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 NOVA1P51513 510 aaKnown RBP9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 TPMTP51580 245 aa9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 SLC6A3Q01959 620 aa9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 HNRNPDQ14103 355 aaKnown RBP9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 DRAP1Q14919 205 aaPredicted RBP9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 STX1AQ16623 288 aa9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 KLHDC7AQ5VTJ3 777 aa9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 ZNF776Q68DI1 518 aaPredicted RBP9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 RFWD3Q6PCD5 774 aa9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 RBM43Q6ZSC3 357 aaKnown RBP9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 ADIPOR2Q86V24 386 aa9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 PASD1Q8IV76 773 aa9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 LGI2Q8N0V4 545 aa9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 TTC17Q96AE7 1141 aa9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 TOE1Q96GM8 510 aaKnown RBP9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 PRICKLE1Q96MT3 831 aaPredicted RBP9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 CPXM1Q96SM3 734 aa9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 MKRN2Q9H000 416 aaKnown RBP9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 NAT10Q9H0A0 1025 aaKnown RBP9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 NUCKS1Q9H1E3 243 aaKnown RBP9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 TMEM245Q9H330 911 aa9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 SIX2Q9NPC8 291 aa9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 PLCB1Q9NQ66 1216 aa9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 LMBRD1Q9NUN5 540 aa9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 WSB2Q9NYS7 404 aaPredicted RBP9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 TPX2Q9ULW0 747 aaKnown RBP9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 CLEC4EQ9ULY5 219 aa9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 NCKAP1Q9Y2A7 1128 aa9.4□□□□□ -0.9
SNORD88A-201ENST00000408314 SPTBN2O15020 2390 aa9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 ATXN2Q99700 1313 aaKnown RBP9.39□□□□□ -0.91
SNORD88A-201ENST00000408314 A0A1B0GTW7 788 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms