RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 ANO10Q9NW15 660 aa16.44■□□□□ 0.22
ATG4B-203ENST00000400772 INTS6Q9UL03 887 aaKnown RBP16.44■□□□□ 0.22
ATG4B-203ENST00000400772 TNRC6BQ9UPQ9 1833 aaKnown RBP16.43■□□□□ 0.22
ATG4B-203ENST00000400772 F8VZ95 297 aa16.43■□□□□ 0.22
ATG4B-203ENST00000400772 GOLGA6L22H0YM25 854 aa16.43■□□□□ 0.22
ATG4B-203ENST00000400772 EPHB6O15197 1021 aa16.43■□□□□ 0.22
ATG4B-203ENST00000400772 SYNCRIPO60506 623 aaKnown RBP16.43■□□□□ 0.22
ATG4B-203ENST00000400772 HSF2BPO75031 334 aa16.43■□□□□ 0.22
ATG4B-203ENST00000400772 EPHX1P07099 455 aa16.43■□□□□ 0.22
ATG4B-203ENST00000400772 TACR2P21452 398 aa16.43■□□□□ 0.22
ATG4B-203ENST00000400772 ITPKAP23677 461 aa16.43■□□□□ 0.22
ATG4B-203ENST00000400772 IRX4P78413 519 aa16.43■□□□□ 0.22
ATG4B-203ENST00000400772 CDK17Q00537 523 aa16.43■□□□□ 0.22
ATG4B-203ENST00000400772 LMAN2Q12907 356 aa16.43■□□□□ 0.22
ATG4B-203ENST00000400772 NCAPHQ15003 741 aa16.43■□□□□ 0.22
ATG4B-203ENST00000400772 STPG1Q5TH74 334 aa16.43■□□□□ 0.22
ATG4B-203ENST00000400772 TAF3Q5VWG9 929 aa16.43■□□□□ 0.22
ATG4B-203ENST00000400772 RAP1GAP2Q684P5 730 aa16.43■□□□□ 0.22
ATG4B-203ENST00000400772 KIAA1324Q6UXG2 1013 aaKnown RBP16.43■□□□□ 0.22
ATG4B-203ENST00000400772 SLC36A4Q6YBV0 504 aa16.43■□□□□ 0.22
ATG4B-203ENST00000400772 SLC26A9Q7LBE3 791 aa16.43■□□□□ 0.22
ATG4B-203ENST00000400772 NOP9Q86U38 636 aaKnown RBP16.43■□□□□ 0.22
ATG4B-203ENST00000400772 SLC41A1Q8IVJ1 513 aa16.43■□□□□ 0.22
ATG4B-203ENST00000400772 LGI2Q8N0V4 545 aa16.43■□□□□ 0.22
ATG4B-203ENST00000400772 ZNF397Q8NF99 534 aaPredicted RBP16.43■□□□□ 0.22
ATG4B-203ENST00000400772 TTC17Q96AE7 1141 aa16.43■□□□□ 0.22
ATG4B-203ENST00000400772 BTN2A3PQ96KV6 586 aa16.43■□□□□ 0.22
ATG4B-203ENST00000400772 ADAM33Q9BZ11 813 aa16.43■□□□□ 0.22
ATG4B-203ENST00000400772 PRDM16Q9HAZ2 1276 aa16.43■□□□□ 0.22
ATG4B-203ENST00000400772 ITM2CQ9NQX7 267 aa16.43■□□□□ 0.22
ATG4B-203ENST00000400772 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.43■□□□□ 0.22
ATG4B-203ENST00000400772 USP36Q9P275 1121 aaKnown RBP16.43■□□□□ 0.22
ATG4B-203ENST00000400772 PILRBQ9UKJ0 227 aa16.43■□□□□ 0.22
ATG4B-203ENST00000400772 CKAP5Q14008 2032 aa16.43■□□□□ 0.22
ATG4B-203ENST00000400772 CACNA1AO00555 2505 aa16.42■□□□□ 0.22
ATG4B-203ENST00000400772 SYNJ2BP-COX16A0A087WUM0 186 aa16.42■□□□□ 0.22
ATG4B-203ENST00000400772 LNP1A1A4G5 178 aa16.42■□□□□ 0.22
ATG4B-203ENST00000400772 FAM170AA1A519 330 aa16.42■□□□□ 0.22
ATG4B-203ENST00000400772 KHNYNO15037 678 aaKnown RBP16.42■□□□□ 0.22
ATG4B-203ENST00000400772 AP5Z1O43299 807 aa16.42■□□□□ 0.22
ATG4B-203ENST00000400772 DAB1O75553 588 aa16.42■□□□□ 0.22
ATG4B-203ENST00000400772 APOEP02649 317 aa16.42■□□□□ 0.22
ATG4B-203ENST00000400772 DLDP09622 509 aaKnown RBP16.42■□□□□ 0.22
ATG4B-203ENST00000400772 C7P10643 843 aa16.42■□□□□ 0.22
ATG4B-203ENST00000400772 GABRB2P47870 512 aa16.42■□□□□ 0.22
ATG4B-203ENST00000400772 ARID5AQ03989 594 aa16.42■□□□□ 0.22
ATG4B-203ENST00000400772 E2F5Q15329 346 aa16.42■□□□□ 0.22
ATG4B-203ENST00000400772 STX1AQ16623 288 aa16.42■□□□□ 0.22
ATG4B-203ENST00000400772 CCDC183Q5T5S1 534 aa16.42■□□□□ 0.22
ATG4B-203ENST00000400772 OTUD1Q5VV17 481 aaPredicted RBP16.42■□□□□ 0.22
ATG4B-203ENST00000400772 PEAR1Q5VY43 1037 aaPredicted RBP16.42■□□□□ 0.22
ATG4B-203ENST00000400772 LYSMD4Q5XG99 296 aa16.42■□□□□ 0.22
ATG4B-203ENST00000400772 SERPINA13PQ6UXR4 307 aa16.42■□□□□ 0.22
ATG4B-203ENST00000400772 MMS22LQ6ZRQ5 1243 aa16.42■□□□□ 0.22
ATG4B-203ENST00000400772 SYT12Q8IV01 421 aa16.42■□□□□ 0.22
ATG4B-203ENST00000400772 CARNMT1Q8N4J0 409 aa16.42■□□□□ 0.22
ATG4B-203ENST00000400772 ZNF366Q8N895 744 aa16.42■□□□□ 0.22
ATG4B-203ENST00000400772 TMEM35BQ8NCS4 154 aa16.42■□□□□ 0.22
ATG4B-203ENST00000400772 MYO19Q96H55 970 aa16.42■□□□□ 0.22
ATG4B-203ENST00000400772 FAM204AQ9H8W3 233 aa16.42■□□□□ 0.22
ATG4B-203ENST00000400772 DDIT4Q9NX09 232 aa16.42■□□□□ 0.22
ATG4B-203ENST00000400772 COX16Q9P0S2 106 aa16.42■□□□□ 0.22
ATG4B-203ENST00000400772 TMEM63CQ9P1W3 806 aa16.42■□□□□ 0.22
ATG4B-203ENST00000400772 LIMA1Q9UHB6 759 aaKnown RBP16.42■□□□□ 0.22
ATG4B-203ENST00000400772 PLA2G4CQ9UP65 541 aa16.42■□□□□ 0.22
ATG4B-203ENST00000400772 SIK3Q9Y2K2 1263 aa16.42■□□□□ 0.22
ATG4B-203ENST00000400772 CEP83Q9Y592 693 aa16.42■□□□□ 0.22
ATG4B-203ENST00000400772 ATXN2Q99700 1313 aaKnown RBP16.42■□□□□ 0.22
ATG4B-203ENST00000400772 MUC22E2RYF6 1773 aaPredicted RBP16.41■□□□□ 0.22
ATG4B-203ENST00000400772 LRRC10BA6NIK2 292 aa16.41■□□□□ 0.22
ATG4B-203ENST00000400772 LUC7L3O95232 432 aaKnown RBP16.41■□□□□ 0.22
ATG4B-203ENST00000400772 MBD3O95983 291 aa16.41■□□□□ 0.22
ATG4B-203ENST00000400772 ATP5BP06576 529 aaKnown RBP16.41■□□□□ 0.22
ATG4B-203ENST00000400772 MMEP08473 750 aa16.41■□□□□ 0.22
ATG4B-203ENST00000400772 ZNF18P17022 549 aa16.41■□□□□ 0.22
ATG4B-203ENST00000400772 POLR2EP19388 210 aaKnown RBP16.41■□□□□ 0.22
ATG4B-203ENST00000400772 TFE3P19532 575 aaPredicted RBP16.41■□□□□ 0.22
ATG4B-203ENST00000400772 NOS2P35228 1153 aa16.41■□□□□ 0.22
ATG4B-203ENST00000400772 COPB1P53618 953 aaKnown RBP16.41■□□□□ 0.22
ATG4B-203ENST00000400772 JAM2P57087 298 aa16.41■□□□□ 0.22
ATG4B-203ENST00000400772 SNX16P57768 344 aa16.41■□□□□ 0.22
ATG4B-203ENST00000400772 MYL5Q02045 173 aa16.41■□□□□ 0.22
ATG4B-203ENST00000400772 ZNF33AQ06730 810 aa16.41■□□□□ 0.22
ATG4B-203ENST00000400772 CAMK2GQ13555 558 aaPredicted RBP16.41■□□□□ 0.22
ATG4B-203ENST00000400772 FNDC3BQ53EP0 1204 aaKnown RBP16.41■□□□□ 0.22
ATG4B-203ENST00000400772 APTXQ7Z2E3 356 aaKnown RBP16.41■□□□□ 0.22
ATG4B-203ENST00000400772 ZDHHC17Q8IUH5 632 aa16.41■□□□□ 0.22
ATG4B-203ENST00000400772 ATP6V0D2Q8N8Y2 350 aa16.41■□□□□ 0.22
ATG4B-203ENST00000400772 ZNF557Q8N988 423 aaPredicted RBP16.41■□□□□ 0.22
ATG4B-203ENST00000400772 EPS8L1Q8TE68 723 aa16.41■□□□□ 0.22
ATG4B-203ENST00000400772 SIPA1Q96FS4 1042 aa16.41■□□□□ 0.22
ATG4B-203ENST00000400772 ZNF419Q96HQ0 510 aaPredicted RBP16.41■□□□□ 0.22
ATG4B-203ENST00000400772 EDEM2Q9BV94 578 aa16.41■□□□□ 0.22
ATG4B-203ENST00000400772 SYNCQ9H7C4 482 aa16.41■□□□□ 0.22
ATG4B-203ENST00000400772 FAM207AQ9NSI2 230 aaPredicted RBP16.41■□□□□ 0.22
ATG4B-203ENST00000400772 WSB2Q9NYS7 404 aaPredicted RBP16.41■□□□□ 0.22
ATG4B-203ENST00000400772 EVLQ9UI08 416 aaPredicted RBP16.41■□□□□ 0.22
ATG4B-203ENST00000400772 NOCTQ9UK39 431 aaKnown RBP16.41■□□□□ 0.22
ATG4B-203ENST00000400772 LAMA1P25391 3075 aa16.41■□□□□ 0.22
ATG4B-203ENST00000400772 CEP192Q8TEP8 1941 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms