RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 ACVR2BQ13705 512 aa11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 PABPC1LQ4VXU2 614 aaKnown RBP11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 PRAMEF19Q5SWL8 479 aa11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 VPS33AQ96AX1 596 aa11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 GPRASP2Q96D09 838 aa11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 TBCDQ9BTW9 1192 aa11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 RBM12Q9NTZ6 932 aaKnown RBP11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 RHBDL2Q9NX52 303 aa11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 COL3A1P02461 1466 aaPredicted RBP11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 SPATA31A5Q5VU36 1347 aa11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 SPATA31A7Q8IWB4 1347 aa11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 FAM20BO75063 409 aa11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 ADH1AP07327 375 aa11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 ALPPL2P10696 532 aa11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 NOS3P29474 1203 aa11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 ADCYAP1R1P41586 468 aa11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 CLK2P49760 499 aaKnown RBP11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 PPIGQ13427 754 aaKnown RBP eCLIP11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 LY6KQ17RY6 165 aa11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 SBK1Q52WX2 424 aa11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 RASGRP2Q7LDG7 609 aa11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 R3HCC1LQ7Z5L2 792 aaKnown RBP11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 S100A13Q99584 98 aa11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 ISCA1Q9BUE6 129 aa11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 COMMD8Q9NX08 183 aa11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 GPRC5DQ9NZD1 345 aa11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 VAV3Q9UKW4 847 aa11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 FZD1Q9UP38 647 aa11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 TRPV2Q9Y5S1 764 aa11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 CABYRO75952 493 aa11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 PDE9AO76083 593 aa11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 NUP107P57740 925 aa11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 OVOS1Q6IE37 1185 aa11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 TYW3Q6IPR3 259 aaKnown RBP11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 BARGINQ6ZT62 677 aa11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 CPA6Q8N4T0 437 aa11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 GAL3ST3Q96A11 431 aa11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 OLFM1Q99784 485 aa11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 SLITRK2Q9H156 845 aa11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 TBC1D13Q9NVG8 400 aa11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 SMIM31A0A1B0GVY4 71 aa11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 PGK1P00558 417 aa11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 IL1BP01584 269 aa11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 DSG3P32926 999 aa11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 RENBPP51606 427 aa11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 ATP13A4Q4VNC1 1196 aa11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 TMEM26Q6ZUK4 368 aa11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 KIF2BQ8N4N8 673 aa11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 SETD7Q8WTS6 366 aaKnown RBP11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 CAPSLQ8WWF8 208 aa11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 ISCUQ9H1K1 167 aa11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.3□□□□□ -0.6
CACNA1C-215ENST00000399637 SDR42E2A6NKP2 422 aa11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 IGF2BP3O00425 579 aaKnown RBP eCLIP11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 FBXO21O94952 628 aa11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 VDRP11473 427 aa11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 PSMC3P17980 439 aa11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 LHX1P48742 406 aa11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 ADRM1Q16186 407 aa11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 ESRP1Q6NXG1 681 aaKnown RBP11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 RASAL3Q86YV0 1011 aa11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 RIPOR3Q96MK2 946 aa11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 FAM111AQ96PZ2 611 aa11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 CHP1Q99653 195 aa11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 ADGRA3Q8IWK6 1321 aa11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 IGSF6O95976 241 aa11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 SPATA31D3P0C874 917 aa11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 SYN1P17600 705 aa11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 BNC2Q6ZN30 1099 aaPredicted RBP11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 SPATA31D4Q6ZUB0 917 aa11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 GATAD2AQ86YP4 633 aa11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 TRAPPC5Q8IUR0 188 aa11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 RNFT2Q96EX2 444 aa11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 EFCAB1Q9HAE3 211 aa11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 TBC1D3DA0A087WVF3 549 aa11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 TBC1D3IA0A087WXS9 549 aa11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 TBC1D3EA0A087X179 549 aa11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 TBC1D3KA0A087X1G2 549 aa11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 TBC1D3FA6NER0 549 aaPredicted RBP11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 TBC1D3LB9A6J9 549 aa11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 TBC1D3HP0C7X1 549 aa11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 CXCR2P25025 360 aa11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 SLC39A12Q504Y0 691 aa11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 TBC1D3GQ6DHY5 549 aa11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 TBC1D3CQ6IPX1 549 aa11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 RNF44Q7L0R7 432 aa11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 TBC1D3Q8IZP1 549 aaPredicted RBP11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 WDR24Q96S15 920 aa11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 MCCC2Q9HCC0 563 aa11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 RAB21Q9UL25 225 aa11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 RPS6KL1Q9Y6S9 549 aa11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 MAGEA13PA6NCF6 341 aa11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 PRKAR2AP13861 404 aaKnown RBP11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 ATP6V1B1P15313 513 aa11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 RXRGP48443 463 aa11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 PEX6Q13608 980 aa11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 SLC22A9Q8IVM8 553 aa11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 TDRD5Q8NAT2 981 aaKnown RBP11.29□□□□□ -0.6
CACNA1C-215ENST00000399637 ADAM2Q99965 735 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms