RNA–Protein interactions for RNA: ENST00000398452.6

SKA1-202, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA1, Length 979 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-202ENST00000398452 ZNF638Q14966 1978 aaKnown RBP14.69□□□□□ -0.06
SKA1-202ENST00000398452 GREB1Q4ZG55 1949 aa14.68□□□□□ -0.06
SKA1-202ENST00000398452 F5H5T6 163 aa14.68□□□□□ -0.06
SKA1-202ENST00000398452 SLU7O95391 586 aaKnown RBP14.68□□□□□ -0.06
SKA1-202ENST00000398452 LATS1O95835 1130 aa14.68□□□□□ -0.06
SKA1-202ENST00000398452 OLFM2O95897 454 aa14.68□□□□□ -0.06
SKA1-202ENST00000398452 IL9P15248 144 aa14.68□□□□□ -0.06
SKA1-202ENST00000398452 EPHB2P29323 1055 aa14.68□□□□□ -0.06
SKA1-202ENST00000398452 CORO1AP31146 461 aaKnown RBP14.68□□□□□ -0.06
SKA1-202ENST00000398452 SERPINB6P35237 376 aa14.68□□□□□ -0.06
SKA1-202ENST00000398452 CDKN2BP42772 138 aa14.68□□□□□ -0.06
SKA1-202ENST00000398452 MTHFRP42898 656 aa14.68□□□□□ -0.06
SKA1-202ENST00000398452 DYNLT1P63172 113 aa14.68□□□□□ -0.06
SKA1-202ENST00000398452 NTHL1P78549 312 aa14.68□□□□□ -0.06
SKA1-202ENST00000398452 EIF4EBP2Q13542 120 aaPredicted RBP14.68□□□□□ -0.06
SKA1-202ENST00000398452 LLGL1Q15334 1064 aa14.68□□□□□ -0.06
SKA1-202ENST00000398452 CA9Q16790 459 aa14.68□□□□□ -0.06
SKA1-202ENST00000398452 ANKRD20A8PQ5CZ79 823 aa14.68□□□□□ -0.06
SKA1-202ENST00000398452 ADAT2Q7Z6V5 191 aaKnown RBP14.68□□□□□ -0.06
SKA1-202ENST00000398452 DENND1CQ8IV53 801 aa14.68□□□□□ -0.06
SKA1-202ENST00000398452 CCDC117Q8IWD4 279 aaPredicted RBP14.68□□□□□ -0.06
SKA1-202ENST00000398452 AZIN2Q96A70 460 aa14.68□□□□□ -0.06
SKA1-202ENST00000398452 TBC1D31Q96DN5 1066 aa14.68□□□□□ -0.06
SKA1-202ENST00000398452 TCEAL4Q96EI5 215 aa14.68□□□□□ -0.06
SKA1-202ENST00000398452 C1orf74Q96LT6 269 aa14.68□□□□□ -0.06
SKA1-202ENST00000398452 RUNDC3BQ96NL0 473 aa14.68□□□□□ -0.06
SKA1-202ENST00000398452 SLC46A2Q9BY10 475 aa14.68□□□□□ -0.06
SKA1-202ENST00000398452 RNF38Q9H0F5 515 aa14.68□□□□□ -0.06
SKA1-202ENST00000398452 ADAM7Q9H2U9 754 aa14.68□□□□□ -0.06
SKA1-202ENST00000398452 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.67□□□□□ -0.06
SKA1-202ENST00000398452 FGF10O15520 208 aaPredicted RBP14.67□□□□□ -0.06
SKA1-202ENST00000398452 LINC01565O15544 149 aa14.67□□□□□ -0.06
SKA1-202ENST00000398452 ACSL4O60488 711 aa14.67□□□□□ -0.06
SKA1-202ENST00000398452 CST8O60676 142 aa14.67□□□□□ -0.06
SKA1-202ENST00000398452 STC2O76061 302 aa14.67□□□□□ -0.06
SKA1-202ENST00000398452 GLP2RO95838 553 aa14.67□□□□□ -0.06
SKA1-202ENST00000398452 IGLV3-27P01718 113 aa14.67□□□□□ -0.06
SKA1-202ENST00000398452 KRT10P13645 584 aa14.67□□□□□ -0.06
SKA1-202ENST00000398452 GOT1P17174 413 aa14.67□□□□□ -0.06
SKA1-202ENST00000398452 TGM2P21980 687 aa14.67□□□□□ -0.06
SKA1-202ENST00000398452 CCR2P41597 374 aa14.67□□□□□ -0.06
SKA1-202ENST00000398452 HCAR3P49019 387 aa14.67□□□□□ -0.06
SKA1-202ENST00000398452 PRSS36Q5K4E3 855 aa14.67□□□□□ -0.06
SKA1-202ENST00000398452 RABGAP1LQ5R372 815 aa14.67□□□□□ -0.06
SKA1-202ENST00000398452 PTCRAQ6ISU1 281 aaPredicted RBP14.67□□□□□ -0.06
SKA1-202ENST00000398452 AADACL2Q6P093 401 aa14.67□□□□□ -0.06
SKA1-202ENST00000398452 RFX8Q6ZV50 586 aa14.67□□□□□ -0.06
SKA1-202ENST00000398452 CYP4V2Q6ZWL3 525 aaPredicted RBP14.67□□□□□ -0.06
SKA1-202ENST00000398452 GET4Q7L5D6 327 aaPredicted RBP14.67□□□□□ -0.06
SKA1-202ENST00000398452 PYROXD2Q8N2H3 581 aa14.67□□□□□ -0.06
SKA1-202ENST00000398452 ING5Q8WYH8 240 aa14.67□□□□□ -0.06
SKA1-202ENST00000398452 P3H4Q92791 437 aa14.67□□□□□ -0.06
SKA1-202ENST00000398452 PABPC5Q96DU9 382 aaKnown RBP14.67□□□□□ -0.06
SKA1-202ENST00000398452 RNF157Q96PX1 679 aa14.67□□□□□ -0.06
SKA1-202ENST00000398452 FERMT1Q9BQL6 677 aa14.67□□□□□ -0.06
SKA1-202ENST00000398452 FRMD8P1Q9BZ68 369 aaPredicted RBP14.67□□□□□ -0.06
SKA1-202ENST00000398452 KIF9Q9HAQ2 790 aa14.67□□□□□ -0.06
SKA1-202ENST00000398452 GKN1Q9NS71 199 aa14.67□□□□□ -0.06
SKA1-202ENST00000398452 ARHGAP26Q9UNA1 814 aa14.67□□□□□ -0.06
SKA1-202ENST00000398452 CD48P09326 243 aa14.66□□□□□ -0.06
SKA1-202ENST00000398452 CEBPBP17676 345 aa14.66□□□□□ -0.06
SKA1-202ENST00000398452 TACR2P21452 398 aa14.66□□□□□ -0.06
SKA1-202ENST00000398452 CHKAP35790 457 aa14.66□□□□□ -0.06
SKA1-202ENST00000398452 ARSEP51690 589 aa14.66□□□□□ -0.06
SKA1-202ENST00000398452 MLLT6P55198 1093 aaPredicted RBP14.66□□□□□ -0.06
SKA1-202ENST00000398452 SLC5A9Q2M3M2 681 aa14.66□□□□□ -0.06
SKA1-202ENST00000398452 LEXMQ3ZCV2 418 aa14.66□□□□□ -0.06
SKA1-202ENST00000398452 RAP1GAP2Q684P5 730 aa14.66□□□□□ -0.06
SKA1-202ENST00000398452 TMCO3Q6UWJ1 677 aa14.66□□□□□ -0.06
SKA1-202ENST00000398452 BBS12Q6ZW61 710 aa14.66□□□□□ -0.06
SKA1-202ENST00000398452 SPATA4Q8NEY3 305 aa14.66□□□□□ -0.06
SKA1-202ENST00000398452 FAM71BQ8TC56 605 aa14.66□□□□□ -0.06
SKA1-202ENST00000398452 NECTIN4Q96NY8 510 aa14.66□□□□□ -0.06
SKA1-202ENST00000398452 RPRD1AQ96P16 312 aaPredicted RBP14.66□□□□□ -0.06
SKA1-202ENST00000398452 CSPG4P5Q96PW8 444 aa14.66□□□□□ -0.06
SKA1-202ENST00000398452 AP1M1Q9BXS5 423 aa14.66□□□□□ -0.06
SKA1-202ENST00000398452 ZYG11BQ9C0D3 744 aa14.66□□□□□ -0.06
SKA1-202ENST00000398452 CD320Q9NPF0 282 aa14.66□□□□□ -0.06
SKA1-202ENST00000398452 TMPRSS4Q9NRS4 437 aa14.66□□□□□ -0.06
SKA1-202ENST00000398452 TDP1Q9NUW8 608 aa14.66□□□□□ -0.06
SKA1-202ENST00000398452 CWC15Q9P013 229 aaKnown RBP14.66□□□□□ -0.06
SKA1-202ENST00000398452 CFAP97Q9P2B7 532 aa14.66□□□□□ -0.06
SKA1-202ENST00000398452 FEZ2Q9UHY8 353 aaPredicted RBP14.66□□□□□ -0.06
SKA1-202ENST00000398452 HS3ST4Q9Y661 456 aa14.66□□□□□ -0.06
SKA1-202ENST00000398452 XIRP2A4UGR9 3374 aa14.65□□□□□ -0.06
SKA1-202ENST00000398452 FAM86C2PA6NEL3 165 aa14.65□□□□□ -0.06
SKA1-202ENST00000398452 C3orf70A6NLC5 250 aaPredicted RBP14.65□□□□□ -0.06
SKA1-202ENST00000398452 E9PAM4 449 aa14.65□□□□□ -0.06
SKA1-202ENST00000398452 APOC4-APOC2K7ER74 178 aa14.65□□□□□ -0.06
SKA1-202ENST00000398452 LEFTY2O00292 366 aa14.65□□□□□ -0.06
SKA1-202ENST00000398452 SLC9A3R1O14745 358 aaPredicted RBP14.65□□□□□ -0.06
SKA1-202ENST00000398452 MCF2LO15068 1137 aa14.65□□□□□ -0.06
SKA1-202ENST00000398452 LRIG2O94898 1065 aa14.65□□□□□ -0.06
SKA1-202ENST00000398452 PAPLNO95428 1278 aa14.65□□□□□ -0.06
SKA1-202ENST00000398452 APOC2P02655 101 aa14.65□□□□□ -0.06
SKA1-202ENST00000398452 CYBBP04839 570 aa14.65□□□□□ -0.06
SKA1-202ENST00000398452 GBP2P32456 591 aaPredicted RBP14.65□□□□□ -0.06
SKA1-202ENST00000398452 NRG1Q02297 640 aaPredicted RBP14.65□□□□□ -0.06
SKA1-202ENST00000398452 LMNB2Q03252 620 aa14.65□□□□□ -0.06
SKA1-202ENST00000398452 AUHQ13825 339 aaKnown RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms