RNA–Protein interactions for RNA: ENST00000398427.6

PPME1-202, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best) BASIC

Gene PPME1, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-202ENST00000398427 RNF8O76064 485 aa11.85□□□□□ -0.51
PPME1-202ENST00000398427 COMTP21964 271 aa11.85□□□□□ -0.51
PPME1-202ENST00000398427 MIPP30301 263 aa11.85□□□□□ -0.51
PPME1-202ENST00000398427 PEX19P40855 299 aa11.85□□□□□ -0.51
PPME1-202ENST00000398427 CXCR3P49682 368 aa11.85□□□□□ -0.51
PPME1-202ENST00000398427 KCNQ1P51787 676 aa11.85□□□□□ -0.51
PPME1-202ENST00000398427 TBX4P57082 545 aa11.85□□□□□ -0.51
PPME1-202ENST00000398427 TUBB2AQ13885 445 aa11.85□□□□□ -0.51
PPME1-202ENST00000398427 CYP4V2Q6ZWL3 525 aaPredicted RBP11.85□□□□□ -0.51
PPME1-202ENST00000398427 SLFN11Q7Z7L1 901 aa11.85□□□□□ -0.51
PPME1-202ENST00000398427 ARID3BQ8IVW6 561 aaPredicted RBP11.85□□□□□ -0.51
PPME1-202ENST00000398427 RIN3Q8TB24 985 aa11.85□□□□□ -0.51
PPME1-202ENST00000398427 USP13Q92995 863 aaPredicted RBP11.85□□□□□ -0.51
PPME1-202ENST00000398427 PEBP4Q96S96 227 aa11.85□□□□□ -0.51
PPME1-202ENST00000398427 SH3GL2Q99962 352 aa11.85□□□□□ -0.51
PPME1-202ENST00000398427 TUBB2BQ9BVA1 445 aa11.85□□□□□ -0.51
PPME1-202ENST00000398427 ARHGAP26Q9UNA1 814 aa11.85□□□□□ -0.51
PPME1-202ENST00000398427 HBS1LQ9Y450 684 aaKnown RBP11.85□□□□□ -0.51
PPME1-202ENST00000398427 GOLGA6CA6NDK9 693 aa11.84□□□□□ -0.51
PPME1-202ENST00000398427 STC2O76061 302 aa11.84□□□□□ -0.51
PPME1-202ENST00000398427 F9P00740 461 aa11.84□□□□□ -0.51
PPME1-202ENST00000398427 GOLGA6DP0CG33 693 aa11.84□□□□□ -0.51
PPME1-202ENST00000398427 IRF1P10914 325 aa11.84□□□□□ -0.51
PPME1-202ENST00000398427 DESP17661 470 aa11.84□□□□□ -0.51
PPME1-202ENST00000398427 PCK1P35558 622 aa11.84□□□□□ -0.51
PPME1-202ENST00000398427 TAS2R40P59535 323 aa11.84□□□□□ -0.51
PPME1-202ENST00000398427 COG7P83436 770 aa11.84□□□□□ -0.51
PPME1-202ENST00000398427 SLC25A11Q02978 314 aaKnown RBP11.84□□□□□ -0.51
PPME1-202ENST00000398427 TFF2Q03403 129 aa11.84□□□□□ -0.51
PPME1-202ENST00000398427 LEXMQ3ZCV2 418 aa11.84□□□□□ -0.51
PPME1-202ENST00000398427 FAM78AQ5JUQ0 283 aa11.84□□□□□ -0.51
PPME1-202ENST00000398427 TXNRD3NBQ6F5E7 133 aa11.84□□□□□ -0.51
PPME1-202ENST00000398427 SCYL2Q6P3W7 929 aa11.84□□□□□ -0.51
PPME1-202ENST00000398427 PARP9Q8IXQ6 854 aa11.84□□□□□ -0.51
PPME1-202ENST00000398427 CCDC185Q8N715 623 aa11.84□□□□□ -0.51
PPME1-202ENST00000398427 ASB16Q96NS5 453 aa11.84□□□□□ -0.51
PPME1-202ENST00000398427 CENPHQ9H3R5 247 aa11.84□□□□□ -0.51
PPME1-202ENST00000398427 TMPRSS4Q9NRS4 437 aa11.84□□□□□ -0.51
PPME1-202ENST00000398427 GOLGA6AQ9NYA3 693 aa11.84□□□□□ -0.51
PPME1-202ENST00000398427 GDE1Q9NZC3 331 aa11.84□□□□□ -0.51
PPME1-202ENST00000398427 PCSK1NQ9UHG2 260 aa11.84□□□□□ -0.51
PPME1-202ENST00000398427 ENO4A6NNW6 628 aa11.84□□□□□ -0.51
PPME1-202ENST00000398427 FTCDO95954 541 aa11.84□□□□□ -0.51
PPME1-202ENST00000398427 NEFHP12036 1026 aa11.84□□□□□ -0.51
PPME1-202ENST00000398427 SP100P23497 879 aaPredicted RBP11.84□□□□□ -0.51
PPME1-202ENST00000398427 IL1R2P27930 398 aa11.84□□□□□ -0.51
PPME1-202ENST00000398427 GBP2P32456 591 aaPredicted RBP11.84□□□□□ -0.51
PPME1-202ENST00000398427 RING1Q06587 406 aa11.84□□□□□ -0.51
PPME1-202ENST00000398427 CCDC13Q8IYE1 715 aa11.84□□□□□ -0.51
PPME1-202ENST00000398427 ST13P5Q8NFI4 369 aaPredicted RBP11.84□□□□□ -0.51
PPME1-202ENST00000398427 BATF3Q9NR55 127 aa11.84□□□□□ -0.51
PPME1-202ENST00000398427 TDP1Q9NUW8 608 aa11.84□□□□□ -0.51
PPME1-202ENST00000398427 USP18Q9UMW8 372 aa11.84□□□□□ -0.51
PPME1-202ENST00000398427 LEFTY2O00292 366 aa11.83□□□□□ -0.52
PPME1-202ENST00000398427 SCAMP3O14828 347 aaKnown RBP11.83□□□□□ -0.52
PPME1-202ENST00000398427 SPOPO43791 374 aa11.83□□□□□ -0.52
PPME1-202ENST00000398427 GREM1O60565 184 aa11.83□□□□□ -0.52
PPME1-202ENST00000398427 FCARP24071 287 aa11.83□□□□□ -0.52
PPME1-202ENST00000398427 WEE1P30291 646 aa11.83□□□□□ -0.52
PPME1-202ENST00000398427 CCR1P32246 355 aa11.83□□□□□ -0.52
PPME1-202ENST00000398427 SLC1A1P43005 524 aa11.83□□□□□ -0.52
PPME1-202ENST00000398427 KPNA1P52294 538 aaPredicted RBP11.83□□□□□ -0.52
PPME1-202ENST00000398427 PPP2R5DQ14738 602 aa11.83□□□□□ -0.52
PPME1-202ENST00000398427 SND1Q7KZF4 910 aaKnown RBP eCLIP11.83□□□□□ -0.52
PPME1-202ENST00000398427 NT5DC3Q86UY8 548 aa11.83□□□□□ -0.52
PPME1-202ENST00000398427 NOA1Q8NC60 698 aaKnown RBP11.83□□□□□ -0.52
PPME1-202ENST00000398427 TTC16Q8NEE8 873 aa11.83□□□□□ -0.52
PPME1-202ENST00000398427 TRIM58Q8NG06 486 aa11.83□□□□□ -0.52
PPME1-202ENST00000398427 SH3RF2Q8TEC5 729 aa11.83□□□□□ -0.52
PPME1-202ENST00000398427 COG1Q8WTW3 980 aa11.83□□□□□ -0.52
PPME1-202ENST00000398427 SMARCD2Q92925 531 aa11.83□□□□□ -0.52
PPME1-202ENST00000398427 CD101Q93033 1021 aa11.83□□□□□ -0.52
PPME1-202ENST00000398427 RNF34Q969K3 372 aa11.83□□□□□ -0.52
PPME1-202ENST00000398427 PLD4Q96BZ4 506 aa11.83□□□□□ -0.52
PPME1-202ENST00000398427 RSPRY1Q96DX4 576 aa11.83□□□□□ -0.52
PPME1-202ENST00000398427 TKTL2Q9H0I9 626 aa11.83□□□□□ -0.52
PPME1-202ENST00000398427 WDCPQ9H6R7 721 aa11.83□□□□□ -0.52
PPME1-202ENST00000398427 XPO7Q9UIA9 1087 aaKnown RBP11.83□□□□□ -0.52
PPME1-202ENST00000398427 KCNU1A8MYU2 1149 aa11.83□□□□□ -0.52
PPME1-202ENST00000398427 MOCS2O96007 188 aaPredicted RBP11.83□□□□□ -0.52
PPME1-202ENST00000398427 KLKB1P03952 638 aa11.83□□□□□ -0.52
PPME1-202ENST00000398427 RPSAP08865 295 aaKnown RBP11.83□□□□□ -0.52
PPME1-202ENST00000398427 LAMP2P13473 410 aa11.83□□□□□ -0.52
PPME1-202ENST00000398427 SMAD2Q15796 467 aaKnown RBP11.83□□□□□ -0.52
PPME1-202ENST00000398427 SMTNL2Q2TAL5 461 aa11.83□□□□□ -0.52
PPME1-202ENST00000398427 CCDC50Q8IVM0 306 aa11.83□□□□□ -0.52
PPME1-202ENST00000398427 SYCE1Q8N0S2 351 aa11.83□□□□□ -0.52
PPME1-202ENST00000398427 LRRC3BQ96PB8 259 aa11.83□□□□□ -0.52
PPME1-202ENST00000398427 ALS2CR12Q96Q35 445 aa11.83□□□□□ -0.52
PPME1-202ENST00000398427 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.83□□□□□ -0.52
PPME1-202ENST00000398427 ARHGEF38Q9NXL2 777 aa11.83□□□□□ -0.52
PPME1-202ENST00000398427 CFAP97Q9P2B7 532 aa11.83□□□□□ -0.52
PPME1-202ENST00000398427 PACSIN2Q9UNF0 486 aaPredicted RBP11.83□□□□□ -0.52
PPME1-202ENST00000398427 VCANP13611 3396 aa11.82□□□□□ -0.52
PPME1-202ENST00000398427 CTAGE15A4D2H0 777 aa11.82□□□□□ -0.52
PPME1-202ENST00000398427 PRPSAP2O60256 369 aa11.82□□□□□ -0.52
PPME1-202ENST00000398427 KIF5CO60282 957 aa11.82□□□□□ -0.52
PPME1-202ENST00000398427 PPFIA2O75334 1257 aa11.82□□□□□ -0.52
PPME1-202ENST00000398427 CTAGE8P0CG41 777 aa11.82□□□□□ -0.52
PPME1-202ENST00000398427 CORO1AP31146 461 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms