RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 CYP1A2P05177 515 aa26.38■■□□□ 1.81
U2AF1-203ENST00000398137 GBP1P32455 592 aa26.38■■□□□ 1.81
U2AF1-203ENST00000398137 ATP11AP98196 1134 aa26.38■■□□□ 1.81
U2AF1-203ENST00000398137 RING1Q06587 406 aa26.38■■□□□ 1.81
U2AF1-203ENST00000398137 SPEM2Q0P670 501 aa26.38■■□□□ 1.81
U2AF1-203ENST00000398137 C15orf59Q2T9L4 293 aaPredicted RBP26.38■■□□□ 1.81
U2AF1-203ENST00000398137 CCDC14Q49A88 953 aa26.38■■□□□ 1.81
U2AF1-203ENST00000398137 Q6ZNB5 142 aa26.38■■□□□ 1.81
U2AF1-203ENST00000398137 HTR3DQ70Z44 454 aa26.38■■□□□ 1.81
U2AF1-203ENST00000398137 DENND1CQ8IV53 801 aa26.38■■□□□ 1.81
U2AF1-203ENST00000398137 PHTF2Q8N3S3 785 aa26.38■■□□□ 1.81
U2AF1-203ENST00000398137 FAM160A2Q8N612 972 aaPredicted RBP26.38■■□□□ 1.81
U2AF1-203ENST00000398137 USP33Q8TEY7 942 aa26.38■■□□□ 1.81
U2AF1-203ENST00000398137 CTNNBL1Q8WYA6 563 aaPredicted RBP26.38■■□□□ 1.81
U2AF1-203ENST00000398137 NT5C3BQ969T7 300 aa26.38■■□□□ 1.81
U2AF1-203ENST00000398137 TRIM7Q9C029 511 aa26.38■■□□□ 1.81
U2AF1-203ENST00000398137 GMEB2Q9UKD1 530 aa26.38■■□□□ 1.81
U2AF1-203ENST00000398137 RALGAPA1Q6GYQ0 2036 aa26.38■■□□□ 1.81
U2AF1-203ENST00000398137 NDUFA10O95299 355 aa26.37■■□□□ 1.81
U2AF1-203ENST00000398137 RETP07949 1114 aa26.37■■□□□ 1.81
U2AF1-203ENST00000398137 PTPN9P43378 593 aa26.37■■□□□ 1.81
U2AF1-203ENST00000398137 HARS2P49590 506 aaKnown RBP26.37■■□□□ 1.81
U2AF1-203ENST00000398137 OGDHQ02218 1023 aa26.37■■□□□ 1.81
U2AF1-203ENST00000398137 CDO1Q16878 200 aa26.37■■□□□ 1.81
U2AF1-203ENST00000398137 ZC3H12AQ5D1E8 599 aaKnown RBP26.37■■□□□ 1.81
U2AF1-203ENST00000398137 LY6G5CQ5SRR4 150 aa26.37■■□□□ 1.81
U2AF1-203ENST00000398137 GAB3Q8WWW8 586 aa26.37■■□□□ 1.81
U2AF1-203ENST00000398137 EXOC4Q96A65 974 aa26.37■■□□□ 1.81
U2AF1-203ENST00000398137 SLC39A13Q96H72 371 aa26.37■■□□□ 1.81
U2AF1-203ENST00000398137 NUP85Q9BW27 656 aa26.37■■□□□ 1.81
U2AF1-203ENST00000398137 DCLK3Q9C098 648 aa26.37■■□□□ 1.81
U2AF1-203ENST00000398137 MRPL47Q9HD33 250 aaKnown RBP26.37■■□□□ 1.81
U2AF1-203ENST00000398137 PIGVQ9NUD9 493 aa26.37■■□□□ 1.81
U2AF1-203ENST00000398137 RAB23Q9ULC3 237 aa26.37■■□□□ 1.81
U2AF1-203ENST00000398137 EPN1Q9Y6I3 576 aaPredicted RBP26.37■■□□□ 1.81
U2AF1-203ENST00000398137 CACNA1AO00555 2505 aa26.36■■□□□ 1.81
U2AF1-203ENST00000398137 EIF3CLB5ME19 914 aaKnown RBP26.36■■□□□ 1.81
U2AF1-203ENST00000398137 LCA5LO95447 670 aa26.36■■□□□ 1.81
U2AF1-203ENST00000398137 MOCS2O96007 188 aaPredicted RBP26.36■■□□□ 1.81
U2AF1-203ENST00000398137 TMEM253P0C7T8 217 aa26.36■■□□□ 1.81
U2AF1-203ENST00000398137 DEUP1Q05D60 604 aa26.36■■□□□ 1.81
U2AF1-203ENST00000398137 EIF4EBP2Q13542 120 aaPredicted RBP26.36■■□□□ 1.81
U2AF1-203ENST00000398137 DMC1Q14565 340 aa26.36■■□□□ 1.81
U2AF1-203ENST00000398137 SPA17Q15506 151 aa26.36■■□□□ 1.81
U2AF1-203ENST00000398137 RSPO4Q2I0M5 234 aaPredicted RBP26.36■■□□□ 1.81
U2AF1-203ENST00000398137 NUGGCQ68CJ6 796 aa26.36■■□□□ 1.81
U2AF1-203ENST00000398137 CAMKK1Q8N5S9 505 aa26.36■■□□□ 1.81
U2AF1-203ENST00000398137 RNF34Q969K3 372 aa26.36■■□□□ 1.81
U2AF1-203ENST00000398137 EIF3CQ99613 913 aaKnown RBP26.36■■□□□ 1.81
U2AF1-203ENST00000398137 TBC1D14Q9P2M4 693 aa26.36■■□□□ 1.81
U2AF1-203ENST00000398137 AGO1Q9UL18 857 aaKnown RBP26.36■■□□□ 1.81
U2AF1-203ENST00000398137 SDK1Q7Z5N4 2213 aa26.35■■□□□ 1.81
U2AF1-203ENST00000398137 TMEM191CA6NGB0 347 aa26.35■■□□□ 1.81
U2AF1-203ENST00000398137 CCP110O43303 1012 aa26.35■■□□□ 1.81
U2AF1-203ENST00000398137 APOEP02649 317 aa26.35■■□□□ 1.81
U2AF1-203ENST00000398137 RDXP35241 583 aaKnown RBP26.35■■□□□ 1.81
U2AF1-203ENST00000398137 ZNF143P52747 638 aaPredicted RBP26.35■■□□□ 1.81
U2AF1-203ENST00000398137 ATXN1P54253 815 aaKnown RBP26.35■■□□□ 1.81
U2AF1-203ENST00000398137 SEC13P55735 322 aa26.35■■□□□ 1.81
U2AF1-203ENST00000398137 RAB6CQ53S08 254 aa26.35■■□□□ 1.81
U2AF1-203ENST00000398137 SH3PXD2AQ5TCZ1 1133 aa26.35■■□□□ 1.81
U2AF1-203ENST00000398137 UNC45BQ8IWX7 931 aa26.35■■□□□ 1.81
U2AF1-203ENST00000398137 ETFBKMTQ8IXQ9 262 aa26.35■■□□□ 1.81
U2AF1-203ENST00000398137 GPR161Q8N6U8 529 aaKnown RBP26.35■■□□□ 1.81
U2AF1-203ENST00000398137 PGAP3Q96FM1 320 aaPredicted RBP26.35■■□□□ 1.81
U2AF1-203ENST00000398137 RAB6CQ9H0N0 254 aa26.35■■□□□ 1.81
U2AF1-203ENST00000398137 A0A0A0MRY4 1105 aa26.34■■□□□ 1.81
U2AF1-203ENST00000398137 IPO7O95373 1038 aaKnown RBP26.34■■□□□ 1.81
U2AF1-203ENST00000398137 ADH5P11766 374 aa26.34■■□□□ 1.81
U2AF1-203ENST00000398137 HNRNPLP14866 589 aaKnown RBP eCLIP26.34■■□□□ 1.81
U2AF1-203ENST00000398137 PSMA2P25787 234 aa26.34■■□□□ 1.81
U2AF1-203ENST00000398137 EIF2DP41214 584 aaKnown RBP26.34■■□□□ 1.81
U2AF1-203ENST00000398137 MAGEA1P43355 309 aa26.34■■□□□ 1.81
U2AF1-203ENST00000398137 ZNF252P-AS1Q0IIN9 211 aa26.34■■□□□ 1.81
U2AF1-203ENST00000398137 C2orf27AQ580R0 203 aa26.34■■□□□ 1.81
U2AF1-203ENST00000398137 ERMP1Q7Z2K6 904 aa26.34■■□□□ 1.81
U2AF1-203ENST00000398137 BNIPLQ7Z465 357 aa26.34■■□□□ 1.81
U2AF1-203ENST00000398137 KBTBD6Q86V97 674 aa26.34■■□□□ 1.81
U2AF1-203ENST00000398137 ACRBPQ8NEB7 543 aa26.34■■□□□ 1.81
U2AF1-203ENST00000398137 FAM172AQ8WUF8 416 aa26.34■■□□□ 1.81
U2AF1-203ENST00000398137 OTUB2Q96DC9 234 aa26.34■■□□□ 1.81
U2AF1-203ENST00000398137 CNPY3Q9BT09 278 aa26.34■■□□□ 1.81
U2AF1-203ENST00000398137 CTTNBP2NLQ9P2B4 639 aa26.34■■□□□ 1.81
U2AF1-203ENST00000398137 USP18Q9UMW8 372 aa26.34■■□□□ 1.81
U2AF1-203ENST00000398137 ZNF510Q9Y2H8 683 aa26.34■■□□□ 1.81
U2AF1-203ENST00000398137 PCDHA13Q9Y5I0 950 aa26.34■■□□□ 1.81
U2AF1-203ENST00000398137 RPP40O75818 363 aaKnown RBP26.33■■□□□ 1.81
U2AF1-203ENST00000398137 ADH1CP00326 375 aa26.33■■□□□ 1.81
U2AF1-203ENST00000398137 F9P00740 461 aa26.33■■□□□ 1.81
U2AF1-203ENST00000398137 CCR1P32246 355 aa26.33■■□□□ 1.81
U2AF1-203ENST00000398137 CXCR3P49682 368 aa26.33■■□□□ 1.81
U2AF1-203ENST00000398137 C10orf76Q5T2E6 689 aa26.33■■□□□ 1.81
U2AF1-203ENST00000398137 EMC10Q5UCC4 262 aa26.33■■□□□ 1.81
U2AF1-203ENST00000398137 CEP68Q76N32 757 aa26.33■■□□□ 1.81
U2AF1-203ENST00000398137 SND1Q7KZF4 910 aaKnown RBP eCLIP26.33■■□□□ 1.81
U2AF1-203ENST00000398137 TMEM25Q86YD3 366 aa26.33■■□□□ 1.81
U2AF1-203ENST00000398137 LRRC8AQ8IWT6 810 aa26.33■■□□□ 1.81
U2AF1-203ENST00000398137 ZNF564Q8TBZ8 553 aaPredicted RBP26.33■■□□□ 1.81
U2AF1-203ENST00000398137 ACDQ96AP0 544 aa26.33■■□□□ 1.81
U2AF1-203ENST00000398137 P2RY11Q96G91 374 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms