RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 ZBTB8OSQ8IWT0 167 aa16.44■□□□□ 0.22
CHMP1A-201ENST00000397901 GPC2Q8N158 579 aa16.44■□□□□ 0.22
CHMP1A-201ENST00000397901 MPP5Q8N3R9 675 aa16.44■□□□□ 0.22
CHMP1A-201ENST00000397901 JADE3Q92613 823 aa16.44■□□□□ 0.22
CHMP1A-201ENST00000397901 CCDC106Q9BWC9 280 aa16.44■□□□□ 0.22
CHMP1A-201ENST00000397901 TMEM98Q9Y2Y6 226 aa16.44■□□□□ 0.22
CHMP1A-201ENST00000397901 A0A088AWK7 358 aa16.43■□□□□ 0.22
CHMP1A-201ENST00000397901 IGKV6D-21A0A0A0MT36 114 aa16.43■□□□□ 0.22
CHMP1A-201ENST00000397901 HTR3EA5X5Y0 456 aa16.43■□□□□ 0.22
CHMP1A-201ENST00000397901 USP2O75604 605 aaPredicted RBP16.43■□□□□ 0.22
CHMP1A-201ENST00000397901 KRT38O76015 456 aa16.43■□□□□ 0.22
CHMP1A-201ENST00000397901 NFICP08651 508 aa16.43■□□□□ 0.22
CHMP1A-201ENST00000397901 PRKCHP24723 683 aa16.43■□□□□ 0.22
CHMP1A-201ENST00000397901 FDFT1P37268 417 aa16.43■□□□□ 0.22
CHMP1A-201ENST00000397901 TRIP10Q15642 601 aa16.43■□□□□ 0.22
CHMP1A-201ENST00000397901 EEPD1Q7L9B9 569 aa16.43■□□□□ 0.22
CHMP1A-201ENST00000397901 TRIM50Q86XT4 487 aa16.43■□□□□ 0.22
CHMP1A-201ENST00000397901 AGAP3Q96P47 875 aa16.43■□□□□ 0.22
CHMP1A-201ENST00000397901 KLC2Q9H0B6 622 aa16.43■□□□□ 0.22
CHMP1A-201ENST00000397901 ZNHIT2Q9UHR6 403 aa16.43■□□□□ 0.22
CHMP1A-201ENST00000397901 AK5Q9Y6K8 562 aa16.43■□□□□ 0.22
CHMP1A-201ENST00000397901 PTPRFP10586 1907 aa16.43■□□□□ 0.22
CHMP1A-201ENST00000397901 HMX2A2RU54 273 aa16.43■□□□□ 0.22
CHMP1A-201ENST00000397901 SLC15A5A6NIM6 579 aa16.43■□□□□ 0.22
CHMP1A-201ENST00000397901 STK10O94804 968 aaKnown RBP16.43■□□□□ 0.22
CHMP1A-201ENST00000397901 FARP2O94887 1054 aaPredicted RBP16.43■□□□□ 0.22
CHMP1A-201ENST00000397901 ENDOD1O94919 500 aa16.43■□□□□ 0.22
CHMP1A-201ENST00000397901 TNFAIP8O95379 198 aa16.43■□□□□ 0.22
CHMP1A-201ENST00000397901 ALDH2P05091 517 aa16.43■□□□□ 0.22
CHMP1A-201ENST00000397901 TCF7P36402 384 aaPredicted RBP16.43■□□□□ 0.22
CHMP1A-201ENST00000397901 BCAR1P56945 870 aa16.43■□□□□ 0.22
CHMP1A-201ENST00000397901 AHI1Q8N157 1196 aa16.43■□□□□ 0.22
CHMP1A-201ENST00000397901 PPP1R14CQ8TAE6 165 aa16.43■□□□□ 0.22
CHMP1A-201ENST00000397901 SLC26A7Q8TE54 656 aa16.43■□□□□ 0.22
CHMP1A-201ENST00000397901 HEXIM2Q96MH2 286 aaKnown RBP16.43■□□□□ 0.22
CHMP1A-201ENST00000397901 NLRP4Q96MN2 994 aa16.43■□□□□ 0.22
CHMP1A-201ENST00000397901 MMP19Q99542 508 aa16.43■□□□□ 0.22
CHMP1A-201ENST00000397901 CNPY3Q9BT09 278 aa16.43■□□□□ 0.22
CHMP1A-201ENST00000397901 APOL6Q9BWW8 343 aa16.43■□□□□ 0.22
CHMP1A-201ENST00000397901 BCO2Q9BYV7 579 aa16.43■□□□□ 0.22
CHMP1A-201ENST00000397901 ZNF696Q9H7X3 374 aa16.43■□□□□ 0.22
CHMP1A-201ENST00000397901 F5H423 210 aaPredicted RBP16.42■□□□□ 0.22
CHMP1A-201ENST00000397901 INO80B-WBP1J3KQ70 363 aa16.42■□□□□ 0.22
CHMP1A-201ENST00000397901 LYPLA1O75608 230 aaPredicted RBP16.42■□□□□ 0.22
CHMP1A-201ENST00000397901 ITGB3P05106 788 aa16.42■□□□□ 0.22
CHMP1A-201ENST00000397901 BPGMP07738 259 aa16.42■□□□□ 0.22
CHMP1A-201ENST00000397901 PMLP29590 882 aa16.42■□□□□ 0.22
CHMP1A-201ENST00000397901 GPD2P43304 727 aa16.42■□□□□ 0.22
CHMP1A-201ENST00000397901 RAB15P59190 212 aa16.42■□□□□ 0.22
CHMP1A-201ENST00000397901 STX3Q13277 289 aa16.42■□□□□ 0.22
CHMP1A-201ENST00000397901 SNAPC2Q13487 334 aa16.42■□□□□ 0.22
CHMP1A-201ENST00000397901 PRKG1Q13976 671 aa16.42■□□□□ 0.22
CHMP1A-201ENST00000397901 TLR1Q15399 786 aa16.42■□□□□ 0.22
CHMP1A-201ENST00000397901 ATF7IP2Q5U623 682 aa16.42■□□□□ 0.22
CHMP1A-201ENST00000397901 TMEM53Q6P2H8 277 aa16.42■□□□□ 0.22
CHMP1A-201ENST00000397901 C16orf46Q6P387 395 aa16.42■□□□□ 0.22
CHMP1A-201ENST00000397901 MPZL3Q6UWV2 235 aa16.42■□□□□ 0.22
CHMP1A-201ENST00000397901 PACS1Q6VY07 963 aa16.42■□□□□ 0.22
CHMP1A-201ENST00000397901 FAM183BPQ6ZVS7 135 aa16.42■□□□□ 0.22
CHMP1A-201ENST00000397901 ZNF410Q86VK4 478 aa16.42■□□□□ 0.22
CHMP1A-201ENST00000397901 ERI1Q8IV48 349 aaKnown RBP16.42■□□□□ 0.22
CHMP1A-201ENST00000397901 PQLC3Q8N755 202 aa16.42■□□□□ 0.22
CHMP1A-201ENST00000397901 C1orf127Q8N9H9 656 aa16.42■□□□□ 0.22
CHMP1A-201ENST00000397901 TMEM176AQ96HP8 235 aa16.42■□□□□ 0.22
CHMP1A-201ENST00000397901 INO80BQ9C086 356 aaPredicted RBP16.42■□□□□ 0.22
CHMP1A-201ENST00000397901 PLGRKTQ9HBL7 147 aa16.42■□□□□ 0.22
CHMP1A-201ENST00000397901 NGRNQ9NPE2 291 aaKnown RBP16.42■□□□□ 0.22
CHMP1A-201ENST00000397901 SOX13Q9UN79 622 aa16.42■□□□□ 0.22
CHMP1A-201ENST00000397901 NR2E3Q9Y5X4 410 aa16.42■□□□□ 0.22
CHMP1A-201ENST00000397901 C2CD4BA6NLJ0 364 aa16.42■□□□□ 0.22
CHMP1A-201ENST00000397901 APOL1O14791 398 aa16.42■□□□□ 0.22
CHMP1A-201ENST00000397901 SERPINB7O75635 380 aa16.42■□□□□ 0.22
CHMP1A-201ENST00000397901 C6orf222P0C671 652 aaPredicted RBP16.42■□□□□ 0.22
CHMP1A-201ENST00000397901 IL4RP24394 825 aa16.42■□□□□ 0.22
CHMP1A-201ENST00000397901 ICAM3P32942 547 aa16.42■□□□□ 0.22
CHMP1A-201ENST00000397901 RGS7P49802 495 aa16.42■□□□□ 0.22
CHMP1A-201ENST00000397901 ACAP1Q15027 740 aa16.42■□□□□ 0.22
CHMP1A-201ENST00000397901 SMAD1Q15797 465 aaKnown RBP16.42■□□□□ 0.22
CHMP1A-201ENST00000397901 CA9Q16790 459 aa16.42■□□□□ 0.22
CHMP1A-201ENST00000397901 POU5F2Q8N7G0 328 aa16.42■□□□□ 0.22
CHMP1A-201ENST00000397901 VPS50Q96JG6 964 aa16.42■□□□□ 0.22
CHMP1A-201ENST00000397901 HNRNPABQ99729 332 aaKnown RBP16.42■□□□□ 0.22
CHMP1A-201ENST00000397901 MRPL1Q9BYD6 325 aaKnown RBP16.42■□□□□ 0.22
CHMP1A-201ENST00000397901 SLC17A6Q9P2U8 582 aa16.42■□□□□ 0.22
CHMP1A-201ENST00000397901 ARHGAP42A6NI28 874 aa16.41■□□□□ 0.22
CHMP1A-201ENST00000397901 TRDMT1O14717 391 aaKnown RBP16.41■□□□□ 0.22
CHMP1A-201ENST00000397901 TPD52L2O43399 206 aaKnown RBP16.41■□□□□ 0.22
CHMP1A-201ENST00000397901 B4GALT4O60513 344 aa16.41■□□□□ 0.22
CHMP1A-201ENST00000397901 CCNT2O60583 730 aaKnown RBP16.41■□□□□ 0.22
CHMP1A-201ENST00000397901 SNNO75324 88 aaPredicted RBP16.41■□□□□ 0.22
CHMP1A-201ENST00000397901 ATP5BP06576 529 aaKnown RBP16.41■□□□□ 0.22
CHMP1A-201ENST00000397901 GRIA1P42261 906 aa16.41■□□□□ 0.22
CHMP1A-201ENST00000397901 GABRB2P47870 512 aa16.41■□□□□ 0.22
CHMP1A-201ENST00000397901 SLC25A3Q00325 362 aa16.41■□□□□ 0.22
CHMP1A-201ENST00000397901 GRAMD1BQ3KR37 738 aa16.41■□□□□ 0.22
CHMP1A-201ENST00000397901 FAM160B1Q5W0V3 765 aa16.41■□□□□ 0.22
CHMP1A-201ENST00000397901 UNC5BQ8IZJ1 945 aa16.41■□□□□ 0.22
CHMP1A-201ENST00000397901 DEPDC1BQ8WUY9 529 aa16.41■□□□□ 0.22
CHMP1A-201ENST00000397901 GCNAQ96QF7 691 aa16.41■□□□□ 0.22
CHMP1A-201ENST00000397901 XAB2Q9HCS7 855 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms