RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 ADH1CP00326 375 aa15.78■□□□□ 0.12
LSS-202ENST00000397728 APOC2P02655 101 aa15.78■□□□□ 0.12
LSS-202ENST00000397728 PRLRP16471 622 aa15.78■□□□□ 0.12
LSS-202ENST00000397728 ARFIP2P53365 341 aa15.78■□□□□ 0.12
LSS-202ENST00000397728 SNRPD1P62314 119 aaKnown RBP15.78■□□□□ 0.12
LSS-202ENST00000397728 PCDH9Q9HC56 1237 aa15.78■□□□□ 0.12
LSS-202ENST00000397728 ADGRA2Q96PE1 1338 aa15.78■□□□□ 0.12
LSS-202ENST00000397728 THOP1P52888 689 aa15.78■□□□□ 0.12
LSS-202ENST00000397728 DDX39BQ13838 428 aaKnown RBP15.78■□□□□ 0.12
LSS-202ENST00000397728 PTPN20Q4JDL3 420 aa15.78■□□□□ 0.12
LSS-202ENST00000397728 CST9Q5W186 159 aa15.78■□□□□ 0.12
LSS-202ENST00000397728 DOK6Q6PKX4 331 aa15.78■□□□□ 0.12
LSS-202ENST00000397728 CFAP52Q8N1V2 620 aa15.78■□□□□ 0.12
LSS-202ENST00000397728 DNPEPQ9ULA0 475 aa15.78■□□□□ 0.12
LSS-202ENST00000397728 SMG5Q9UPR3 1016 aaKnown RBP15.78■□□□□ 0.12
LSS-202ENST00000397728 CHD4Q14839 1912 aa15.78■□□□□ 0.12
LSS-202ENST00000397728 SYNDIG1LA6NDD5 238 aa15.77■□□□□ 0.12
LSS-202ENST00000397728 TBC1D4O60343 1298 aa15.77■□□□□ 0.12
LSS-202ENST00000397728 ALDH1A2O94788 518 aa15.77■□□□□ 0.12
LSS-202ENST00000397728 ADSSP30520 456 aa15.77■□□□□ 0.12
LSS-202ENST00000397728 BEND6Q5SZJ8 279 aaPredicted RBP15.77■□□□□ 0.12
LSS-202ENST00000397728 TTC39BQ5VTQ0 682 aaPredicted RBP15.77■□□□□ 0.12
LSS-202ENST00000397728 DAB2IPQ5VWQ8 1189 aa15.77■□□□□ 0.12
LSS-202ENST00000397728 PPP1R16AQ96I34 528 aa15.77■□□□□ 0.12
LSS-202ENST00000397728 EXOC2Q96KP1 924 aa15.77■□□□□ 0.12
LSS-202ENST00000397728 DPEP3Q9H4B8 488 aa15.77■□□□□ 0.12
LSS-202ENST00000397728 MPP6Q9NZW5 540 aa15.77■□□□□ 0.12
LSS-202ENST00000397728 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.77■□□□□ 0.122e-6■■■■■ 55.4
LSS-202ENST00000397728 L3MBTL1Q9Y468 752 aa15.77■□□□□ 0.12
LSS-202ENST00000397728 FGF19O95750 216 aa15.77■□□□□ 0.12
LSS-202ENST00000397728 AGTP01019 485 aa15.77■□□□□ 0.12
LSS-202ENST00000397728 CSF2RAP15509 400 aa15.77■□□□□ 0.12
LSS-202ENST00000397728 PTPN7P35236 360 aa15.77■□□□□ 0.12
LSS-202ENST00000397728 CCDC85BQ15834 202 aaPredicted RBP15.77■□□□□ 0.12
LSS-202ENST00000397728 PAPD7Q5XG87 772 aaKnown RBP15.77■□□□□ 0.12
LSS-202ENST00000397728 NYAP1Q6ZVC0 841 aa15.77■□□□□ 0.12
LSS-202ENST00000397728 GLT6D1Q7Z4J2 308 aa15.77■□□□□ 0.12
LSS-202ENST00000397728 IRF2BP1Q8IU81 584 aa15.77■□□□□ 0.12
LSS-202ENST00000397728 CPXM1Q96SM3 734 aa15.77■□□□□ 0.12
LSS-202ENST00000397728 MARCOQ9UEW3 520 aaPredicted RBP15.77■□□□□ 0.12
LSS-202ENST00000397728 C5P01031 1676 aa15.77■□□□□ 0.12
LSS-202ENST00000397728 SOAT2O75908 522 aa15.77■□□□□ 0.11
LSS-202ENST00000397728 ITGB6P18564 788 aa15.77■□□□□ 0.11
LSS-202ENST00000397728 MSH3P20585 1137 aa15.77■□□□□ 0.11
LSS-202ENST00000397728 CNPY4Q8N129 248 aa15.77■□□□□ 0.11
LSS-202ENST00000397728 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.77■□□□□ 0.11
LSS-202ENST00000397728 PNKPQ96T60 521 aa15.77■□□□□ 0.11
LSS-202ENST00000397728 OXCT2Q9BYC2 517 aaPredicted RBP15.77■□□□□ 0.11
LSS-202ENST00000397728 CLDND1Q9NY35 253 aa15.77■□□□□ 0.11
LSS-202ENST00000397728 DEC1Q9P2X7 70 aa15.77■□□□□ 0.11
LSS-202ENST00000397728 DAB1O75553 588 aa15.77■□□□□ 0.11
LSS-202ENST00000397728 PTPN2P17706 415 aa15.77■□□□□ 0.11
LSS-202ENST00000397728 ERCC2P18074 760 aa15.77■□□□□ 0.11
LSS-202ENST00000397728 HSPA9P38646 679 aaKnown RBP15.77■□□□□ 0.11
LSS-202ENST00000397728 ANKRD20A8PQ5CZ79 823 aa15.77■□□□□ 0.11
LSS-202ENST00000397728 TRMT11Q7Z4G4 463 aaKnown RBP15.77■□□□□ 0.11
LSS-202ENST00000397728 RSRC1Q96IZ7 334 aaKnown RBP15.77■□□□□ 0.11
LSS-202ENST00000397728 FAM167BQ9BTA0 163 aa15.77■□□□□ 0.11
LSS-202ENST00000397728 PPCSQ9HAB8 311 aa15.77■□□□□ 0.11
LSS-202ENST00000397728 GRID1Q9ULK0 1009 aa15.77■□□□□ 0.11
LSS-202ENST00000397728 CYP2A6P11509 494 aaPredicted RBP15.76■□□□□ 0.11
LSS-202ENST00000397728 GOT1P17174 413 aa15.76■□□□□ 0.11
LSS-202ENST00000397728 KRT4P19013 534 aa15.76■□□□□ 0.11
LSS-202ENST00000397728 POU4F1Q01851 419 aa15.76■□□□□ 0.11
LSS-202ENST00000397728 MAMDC4Q6UXC1 1216 aa15.76■□□□□ 0.11
LSS-202ENST00000397728 BAZ2AQ9UIF9 1905 aaKnown RBP15.76■□□□□ 0.11
LSS-202ENST00000397728 NCF1BA6NI72 391 aaPredicted RBP15.76■□□□□ 0.11
LSS-202ENST00000397728 NCF1CA8MVU1 366 aaPredicted RBP15.76■□□□□ 0.11
LSS-202ENST00000397728 DCTN3O75935 186 aa15.76■□□□□ 0.11
LSS-202ENST00000397728 NCF1P14598 390 aaPredicted RBP15.76■□□□□ 0.11
LSS-202ENST00000397728 LMO2P25791 158 aa15.76■□□□□ 0.11
LSS-202ENST00000397728 IFNA8P32881 189 aa15.76■□□□□ 0.11
LSS-202ENST00000397728 STX3Q13277 289 aa15.76■□□□□ 0.11
LSS-202ENST00000397728 C11orf96Q7Z7L8 435 aa15.76■□□□□ 0.11
LSS-202ENST00000397728 RIPOR3Q96MK2 946 aa15.76■□□□□ 0.11
LSS-202ENST00000397728 VAT1Q99536 393 aa15.76■□□□□ 0.11
LSS-202ENST00000397728 MIR1-1HGQ9H1L0 117 aa15.76■□□□□ 0.11
LSS-202ENST00000397728 NDUFS2O75306 463 aa15.76■□□□□ 0.11
LSS-202ENST00000397728 PPFIA2O75334 1257 aa15.76■□□□□ 0.11
LSS-202ENST00000397728 STRA8Q7Z7C7 330 aa15.76■□□□□ 0.11
LSS-202ENST00000397728 KATNAL2Q8IYT4 538 aa15.76■□□□□ 0.11
LSS-202ENST00000397728 MYO1HQ8N1T3 1032 aa15.76■□□□□ 0.11
LSS-202ENST00000397728 SH2D3CQ8N5H7 860 aa15.76■□□□□ 0.11
LSS-202ENST00000397728 HIPK4Q8NE63 616 aa15.76■□□□□ 0.11
LSS-202ENST00000397728 JOSD2Q8TAC2 188 aa15.76■□□□□ 0.11
LSS-202ENST00000397728 TUBB6Q9BUF5 446 aa15.76■□□□□ 0.11
LSS-202ENST00000397728 TLR10Q9BXR5 811 aa15.76■□□□□ 0.11
LSS-202ENST00000397728 UTP6Q9NYH9 597 aaKnown RBP15.76■□□□□ 0.11
LSS-202ENST00000397728 TYMPP19971 482 aa15.76■□□□□ 0.11
LSS-202ENST00000397728 RAB30Q15771 203 aa15.76■□□□□ 0.11
LSS-202ENST00000397728 NUP188Q5SRE5 1749 aa15.76■□□□□ 0.11
LSS-202ENST00000397728 CASKIN2Q8WXE0 1202 aa15.76■□□□□ 0.11
LSS-202ENST00000397728 EFHD1Q9BUP0 239 aa15.76■□□□□ 0.11
LSS-202ENST00000397728 C1QTNF7Q9BXJ2 289 aa15.76■□□□□ 0.11
LSS-202ENST00000397728 TXLNGQ9NUQ3 528 aa15.76■□□□□ 0.11
LSS-202ENST00000397728 IFRD1O00458 451 aaPredicted RBP15.75■□□□□ 0.11
LSS-202ENST00000397728 ERBB2P04626 1255 aa15.75■□□□□ 0.11
LSS-202ENST00000397728 STMN1P16949 149 aa15.75■□□□□ 0.11
LSS-202ENST00000397728 RAD23BP54727 409 aa15.75■□□□□ 0.11
LSS-202ENST00000397728 MPP3Q13368 585 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms