RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 VWA5B1Q5TIE3 1220 aa10.73□□□□□ -0.69
CPSF1P1-201ENST00000397477 C1orf146Q5VVC0 180 aa10.73□□□□□ -0.69
CPSF1P1-201ENST00000397477 NCBP2-AS2Q69YL0 99 aa10.73□□□□□ -0.69
CPSF1P1-201ENST00000397477 SLC26A9Q7LBE3 791 aa10.73□□□□□ -0.69
CPSF1P1-201ENST00000397477 METTL23Q86XA0 190 aa10.73□□□□□ -0.69
CPSF1P1-201ENST00000397477 RELL1Q8IUW5 271 aa10.73□□□□□ -0.69
CPSF1P1-201ENST00000397477 TRIM42Q8IWZ5 723 aa10.73□□□□□ -0.69
CPSF1P1-201ENST00000397477 RYBPQ8N488 228 aaPredicted RBP10.73□□□□□ -0.69
CPSF1P1-201ENST00000397477 LRRC52Q8N7C0 313 aa10.73□□□□□ -0.69
CPSF1P1-201ENST00000397477 PPFIBP2Q8ND30 876 aa10.73□□□□□ -0.69
CPSF1P1-201ENST00000397477 GPR152Q8TDT2 470 aa10.73□□□□□ -0.69
CPSF1P1-201ENST00000397477 GJD2Q9UKL4 321 aa10.73□□□□□ -0.69
CPSF1P1-201ENST00000397477 APOBEC2Q9Y235 224 aaKnown RBP10.73□□□□□ -0.69
CPSF1P1-201ENST00000397477 ZNFX1Q9P2E3 1918 aaKnown RBP10.73□□□□□ -0.69
CPSF1P1-201ENST00000397477 SMAPO00193 183 aa10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 OAS1P00973 400 aaKnown RBP10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 GNAT1P11488 350 aa10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 PTPN4P29074 926 aa10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 PNPLA4P41247 253 aa10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 PREPLQ4J6C6 727 aaPredicted RBP10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 SDCCAG8Q86SQ7 713 aaPredicted RBP10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 KBTBD7Q8WVZ9 684 aa10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 WNT8BQ93098 351 aa10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 MFSD3Q96ES6 412 aa10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 EBF4Q9BQW3 602 aa10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 GEMIN8Q9NWZ8 242 aaKnown RBP10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 ABI2Q9NYB9 513 aaPredicted RBP10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 PRKAG3Q9UGI9 489 aa10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 DCAF8L1A6NGE4 600 aa10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 TXNDC9O14530 226 aa10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 PHGDHO43175 533 aaKnown RBP10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 ALADP13716 330 aa10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 CPT1AP50416 773 aa10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 SLC12A2P55011 1212 aa10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 MOGSQ13724 837 aa10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 ZRSR2Q15696 482 aaKnown RBP10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 NT5DC4Q86YG4 428 aa10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 ZNF567Q8N184 647 aa10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 AGAP2Q99490 1192 aa10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 DUSP16Q9BY84 665 aa10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 ADAMTS10Q9H324 1103 aa10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 CXorf56Q9H5V9 222 aa10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 ARHGEF3Q9NR81 526 aa10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 ATAD5Q96QE3 1844 aa10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 BCLAF3A2AJT9 711 aaKnown RBP10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 E9PBE3 544 aa10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 MSI1O43347 362 aaKnown RBP10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 KLHL41O60662 606 aa10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 KRT36O76013 467 aa10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 NOS2P35228 1153 aa10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 SERPINB6P35237 376 aa10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 CDK16Q00536 496 aa10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 GEN1Q17RS7 908 aa10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 TSNAXIP1Q2TAA8 658 aa10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 SLC25A52Q3SY17 297 aa10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 TFAP2DQ7Z6R9 452 aa10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 PNPLA1Q8N8W4 532 aa10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 MCUQ8NE86 351 aa10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 KHSRPQ92945 711 aaKnown RBP eCLIP10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 PABPC5Q96DU9 382 aaKnown RBP10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 PCED1BQ96HM7 432 aa10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 EPAS1Q99814 870 aa10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 SGIP1Q9BQI5 828 aa10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 WWP1Q9H0M0 922 aa10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 DENND2DQ9H6A0 471 aaPredicted RBP10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 TASP1Q9H6P5 420 aa10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 OR12D3Q9UGF7 316 aa10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 SFMBT1Q9UHJ3 866 aa10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 PLLPQ9Y342 182 aa10.72□□□□□ -0.69
CPSF1P1-201ENST00000397477 GLTPD2A6NH11 291 aa10.71□□□□□ -0.69
CPSF1P1-201ENST00000397477 C2CD2LO14523 706 aa10.71□□□□□ -0.69
CPSF1P1-201ENST00000397477 MDM4O15151 490 aa10.71□□□□□ -0.69
CPSF1P1-201ENST00000397477 GPR32O75388 356 aa10.71□□□□□ -0.69
CPSF1P1-201ENST00000397477 NFKB1P19838 968 aa10.71□□□□□ -0.69
CPSF1P1-201ENST00000397477 CD52P31358 61 aa10.71□□□□□ -0.69
CPSF1P1-201ENST00000397477 ARL1P40616 181 aaPredicted RBP10.71□□□□□ -0.69
CPSF1P1-201ENST00000397477 HIC1Q14526 733 aa10.71□□□□□ -0.69
CPSF1P1-201ENST00000397477 BTBD8Q5XKL5 378 aa10.71□□□□□ -0.69
CPSF1P1-201ENST00000397477 CYP4V2Q6ZWL3 525 aaPredicted RBP10.71□□□□□ -0.69
CPSF1P1-201ENST00000397477 OTOP3Q7RTS5 596 aa10.71□□□□□ -0.69
CPSF1P1-201ENST00000397477 SPNS2Q8IVW8 549 aa10.71□□□□□ -0.69
CPSF1P1-201ENST00000397477 TEX9Q8N6V9 391 aa10.71□□□□□ -0.69
CPSF1P1-201ENST00000397477 SREK1Q8WXA9 508 aaKnown RBP10.71□□□□□ -0.69
CPSF1P1-201ENST00000397477 PTPN18Q99952 460 aa10.71□□□□□ -0.69
CPSF1P1-201ENST00000397477 FSD1LQ9BXM9 530 aa10.71□□□□□ -0.69
CPSF1P1-201ENST00000397477 NFKBIZQ9BYH8 718 aa10.71□□□□□ -0.69
CPSF1P1-201ENST00000397477 PNPOQ9NVS9 261 aa10.71□□□□□ -0.69
CPSF1P1-201ENST00000397477 FLRT1Q9NZU1 646 aa10.71□□□□□ -0.69
CPSF1P1-201ENST00000397477 VANGL2Q9ULK5 521 aa10.71□□□□□ -0.69
CPSF1P1-201ENST00000397477 C15orf41Q9Y2V0 281 aa10.71□□□□□ -0.69
CPSF1P1-201ENST00000397477 ZBTB24O43167 697 aaPredicted RBP10.71□□□□□ -0.69
CPSF1P1-201ENST00000397477 ETFBP38117 255 aa10.71□□□□□ -0.69
CPSF1P1-201ENST00000397477 USP4Q13107 963 aa10.71□□□□□ -0.69
CPSF1P1-201ENST00000397477 PRPSAP1Q14558 356 aa10.71□□□□□ -0.69
CPSF1P1-201ENST00000397477 USP10Q14694 798 aaKnown RBP10.71□□□□□ -0.69
CPSF1P1-201ENST00000397477 GALNTL6Q49A17 601 aa10.71□□□□□ -0.69
CPSF1P1-201ENST00000397477 RINLQ6ZS11 566 aa10.71□□□□□ -0.69
CPSF1P1-201ENST00000397477 GPRIN1Q7Z2K8 1008 aa10.71□□□□□ -0.69
CPSF1P1-201ENST00000397477 MIB1Q86YT6 1006 aa10.71□□□□□ -0.69
CPSF1P1-201ENST00000397477 SPATA22Q8NHS9 363 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms