RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 DMAP1Q9NPF5 467 aaPredicted RBP14.33□□□□□ -0.12
NUP98-204ENST00000397004 FAM49BQ9NUQ9 324 aa14.33□□□□□ -0.12
NUP98-204ENST00000397004 COPG2Q9UBF2 871 aa14.33□□□□□ -0.12
NUP98-204ENST00000397004 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.33□□□□□ -0.12
NUP98-204ENST00000397004 VILLO15195 856 aa14.33□□□□□ -0.12
NUP98-204ENST00000397004 VDRP11473 427 aa14.33□□□□□ -0.12
NUP98-204ENST00000397004 MLH1P40692 756 aa14.33□□□□□ -0.12
NUP98-204ENST00000397004 DPP6P42658 865 aa14.33□□□□□ -0.12
NUP98-204ENST00000397004 IRF9Q00978 393 aa14.33□□□□□ -0.12
NUP98-204ENST00000397004 INCA1Q0VD86 236 aa14.33□□□□□ -0.12
NUP98-204ENST00000397004 SURF1Q15526 300 aa14.33□□□□□ -0.12
NUP98-204ENST00000397004 SOWAHAQ2M3V2 549 aa14.33□□□□□ -0.12
NUP98-204ENST00000397004 TBC1D25Q3MII6 688 aa14.33□□□□□ -0.12
NUP98-204ENST00000397004 PDPK2PQ6A1A2 396 aa14.33□□□□□ -0.12
NUP98-204ENST00000397004 TMC7Q7Z402 723 aa14.33□□□□□ -0.12
NUP98-204ENST00000397004 WDR75Q8IWA0 830 aaKnown RBP14.33□□□□□ -0.12
NUP98-204ENST00000397004 CLMNQ96JQ2 1002 aa14.33□□□□□ -0.12
NUP98-204ENST00000397004 MRPL45Q9BRJ2 306 aaKnown RBP14.33□□□□□ -0.12
NUP98-204ENST00000397004 MIS12Q9H081 205 aa14.33□□□□□ -0.12
NUP98-204ENST00000397004 CLIC5Q9NZA1 410 aa14.33□□□□□ -0.12
NUP98-204ENST00000397004 ITGA2BP08514 1039 aa14.32□□□□□ -0.12
NUP98-204ENST00000397004 TPSB2P20231 275 aa14.32□□□□□ -0.12
NUP98-204ENST00000397004 SESN2P58004 480 aaPredicted RBP14.32□□□□□ -0.12
NUP98-204ENST00000397004 PITX1P78337 314 aaPredicted RBP14.32□□□□□ -0.12
NUP98-204ENST00000397004 PDK2Q15119 407 aa14.32□□□□□ -0.12
NUP98-204ENST00000397004 TPSAB1Q15661 275 aa14.32□□□□□ -0.12
NUP98-204ENST00000397004 NIM1KQ8IY84 436 aa14.32□□□□□ -0.12
NUP98-204ENST00000397004 AGR3Q8TD06 166 aa14.32□□□□□ -0.12
NUP98-204ENST00000397004 HPDLQ96IR7 371 aa14.32□□□□□ -0.12
NUP98-204ENST00000397004 COG4Q9H9E3 785 aa14.32□□□□□ -0.12
NUP98-204ENST00000397004 CPSF2Q9P2I0 782 aaKnown RBP14.32□□□□□ -0.12
NUP98-204ENST00000397004 ITGA11Q9UKX5 1188 aa14.32□□□□□ -0.12
NUP98-204ENST00000397004 E9PBE3 544 aa14.32□□□□□ -0.12
NUP98-204ENST00000397004 KLHL41O60662 606 aa14.32□□□□□ -0.12
NUP98-204ENST00000397004 AMHP03971 560 aa14.32□□□□□ -0.12
NUP98-204ENST00000397004 TFAP2AP05549 437 aa14.32□□□□□ -0.12
NUP98-204ENST00000397004 HARS2P49590 506 aaKnown RBP14.32□□□□□ -0.12
NUP98-204ENST00000397004 MTTPP55157 894 aa14.32□□□□□ -0.12
NUP98-204ENST00000397004 ZNF280AP59817 542 aaPredicted RBP14.32□□□□□ -0.12
NUP98-204ENST00000397004 LAMB3Q13751 1172 aa14.32□□□□□ -0.12
NUP98-204ENST00000397004 GOLGA7BQ2TAP0 167 aa14.32□□□□□ -0.12
NUP98-204ENST00000397004 LILRA2Q8N149 483 aa14.32□□□□□ -0.12
NUP98-204ENST00000397004 NAT14Q8WUY8 206 aa14.32□□□□□ -0.12
NUP98-204ENST00000397004 NDRG1Q92597 394 aaKnown RBP14.32□□□□□ -0.12
NUP98-204ENST00000397004 ATXN7L3BQ96GX2 97 aa14.32□□□□□ -0.12
NUP98-204ENST00000397004 KLHL4Q9C0H6 718 aa14.32□□□□□ -0.12
NUP98-204ENST00000397004 INPP5FQ9Y2H2 1132 aa14.32□□□□□ -0.12
NUP98-204ENST00000397004 DPYSL4O14531 572 aa14.32□□□□□ -0.12
NUP98-204ENST00000397004 CASQ2O14958 399 aaPredicted RBP14.32□□□□□ -0.12
NUP98-204ENST00000397004 GOT1P17174 413 aa14.32□□□□□ -0.12
NUP98-204ENST00000397004 TBL3Q12788 808 aaKnown RBP14.32□□□□□ -0.12
NUP98-204ENST00000397004 TBCCQ15814 346 aa14.32□□□□□ -0.12
NUP98-204ENST00000397004 SLC35F5Q8WV83 523 aa14.32□□□□□ -0.12
NUP98-204ENST00000397004 CNKSR2Q8WXI2 1034 aa14.32□□□□□ -0.12
NUP98-204ENST00000397004 OLFM3Q96PB7 478 aa14.32□□□□□ -0.12
NUP98-204ENST00000397004 CSPG4P5Q96PW8 444 aa14.32□□□□□ -0.12
NUP98-204ENST00000397004 ZNF670Q9BS34 389 aa14.32□□□□□ -0.12
NUP98-204ENST00000397004 CAB39LQ9H9S4 337 aa14.32□□□□□ -0.12
NUP98-204ENST00000397004 RPF1Q9H9Y2 349 aaKnown RBP14.32□□□□□ -0.12
NUP98-204ENST00000397004 G3V2L1 256 aa14.31□□□□□ -0.12
NUP98-204ENST00000397004 NFKBIEO00221 500 aa14.31□□□□□ -0.12
NUP98-204ENST00000397004 LTFP02788 710 aa14.31□□□□□ -0.12
NUP98-204ENST00000397004 JUNP05412 331 aaKnown RBP14.31□□□□□ -0.12
NUP98-204ENST00000397004 PDK3Q15120 406 aa14.31□□□□□ -0.12
NUP98-204ENST00000397004 TRIP10Q15642 601 aa14.31□□□□□ -0.12
NUP98-204ENST00000397004 BOLA3Q53S33 107 aa14.31□□□□□ -0.12
NUP98-204ENST00000397004 LGSNQ5TDP6 509 aa14.31□□□□□ -0.12
NUP98-204ENST00000397004 ACOT1Q86TX2 421 aa14.31□□□□□ -0.12
NUP98-204ENST00000397004 SEPT1Q8WYJ6 367 aa14.31□□□□□ -0.12
NUP98-204ENST00000397004 EZH1Q92800 747 aaPredicted RBP14.31□□□□□ -0.12
NUP98-204ENST00000397004 DNAJC1Q96KC8 554 aaKnown RBP14.31□□□□□ -0.12
NUP98-204ENST00000397004 QKIQ96PU8 341 aaKnown RBP eCLIP14.31□□□□□ -0.12
NUP98-204ENST00000397004 LENG8Q96PV6 779 aaPredicted RBP14.31□□□□□ -0.12
NUP98-204ENST00000397004 AGAP2Q99490 1192 aa14.31□□□□□ -0.12
NUP98-204ENST00000397004 VRTNQ9H8Y1 702 aa14.31□□□□□ -0.12
NUP98-204ENST00000397004 SYBUQ9NX95 663 aa14.31□□□□□ -0.12
NUP98-204ENST00000397004 BARX2Q9UMQ3 279 aaPredicted RBP14.31□□□□□ -0.12
NUP98-204ENST00000397004 APOBEC2Q9Y235 224 aaKnown RBP14.31□□□□□ -0.12
NUP98-204ENST00000397004 MDM4O15151 490 aa14.31□□□□□ -0.12
NUP98-204ENST00000397004 DGKIO75912 1065 aa14.31□□□□□ -0.12
NUP98-204ENST00000397004 SERPINE1P05121 402 aa14.31□□□□□ -0.12
NUP98-204ENST00000397004 PYGLP06737 847 aa14.31□□□□□ -0.12
NUP98-204ENST00000397004 NCF2P19878 526 aaPredicted RBP14.31□□□□□ -0.12
NUP98-204ENST00000397004 FOLH1Q04609 750 aa14.31□□□□□ -0.12
NUP98-204ENST00000397004 FBXW8Q8N3Y1 598 aa14.31□□□□□ -0.12
NUP98-204ENST00000397004 PPP1R36Q96LQ0 422 aa14.31□□□□□ -0.12
NUP98-204ENST00000397004 DPEP3Q9H4B8 488 aa14.31□□□□□ -0.12
NUP98-204ENST00000397004 DNAJC28Q9NX36 388 aa14.31□□□□□ -0.12
NUP98-204ENST00000397004 TNFSF13BQ9Y275 285 aa14.31□□□□□ -0.12
NUP98-204ENST00000397004 AK5Q9Y6K8 562 aa14.31□□□□□ -0.12
NUP98-204ENST00000397004 MCM3APO60318 1980 aa14.31□□□□□ -0.12
NUP98-204ENST00000397004 CALRP27797 417 aaKnown RBP14.31□□□□□ -0.12
NUP98-204ENST00000397004 MS4A2Q01362 244 aa14.31□□□□□ -0.12
NUP98-204ENST00000397004 DPYSL2Q16555 572 aa14.31□□□□□ -0.12
NUP98-204ENST00000397004 STXBP5Q5T5C0 1151 aa14.31□□□□□ -0.12
NUP98-204ENST00000397004 DNERQ8NFT8 737 aa14.31□□□□□ -0.12
NUP98-204ENST00000397004 SLC4A5Q9BY07 1137 aa14.31□□□□□ -0.12
NUP98-204ENST00000397004 FRMD8Q9BZ67 464 aaPredicted RBP14.31□□□□□ -0.12
NUP98-204ENST00000397004 DHX35Q9H5Z1 703 aaKnown RBP14.31□□□□□ -0.12
NUP98-204ENST00000397004 WDR55Q9H6Y2 383 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms