RNA–Protein interactions for RNA: ENST00000396684.2

ATN1-202, Transcript of atrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATN1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-202ENST00000396684 CAPN15O75808 1086 aa12.24□□□□□ -0.45
ATN1-202ENST00000396684 HDAC4P56524 1084 aa12.24□□□□□ -0.45
ATN1-202ENST00000396684 PLD1Q13393 1074 aa12.24□□□□□ -0.45
ATN1-202ENST00000396684 SLC25A41Q8N5S1 370 aa12.24□□□□□ -0.45
ATN1-202ENST00000396684 LRRN4Q8WUT4 740 aa12.24□□□□□ -0.45
ATN1-202ENST00000396684 SLC9A7Q96T83 725 aa12.24□□□□□ -0.45
ATN1-202ENST00000396684 LRRC40Q9H9A6 602 aa12.24□□□□□ -0.45
ATN1-202ENST00000396684 C20orf96Q9NUD7 363 aaPredicted RBP12.24□□□□□ -0.45
ATN1-202ENST00000396684 UBP1Q9NZI7 540 aa12.24□□□□□ -0.45
ATN1-202ENST00000396684 MRPL42Q9Y6G3 142 aaKnown RBP12.24□□□□□ -0.45
ATN1-202ENST00000396684 H0Y626 953 aa12.24□□□□□ -0.45
ATN1-202ENST00000396684 NUDT17P0C025 328 aa12.24□□□□□ -0.45
ATN1-202ENST00000396684 OR1E1P30953 314 aa12.24□□□□□ -0.45
ATN1-202ENST00000396684 TAF10Q12962 218 aa12.24□□□□□ -0.45
ATN1-202ENST00000396684 CDH18Q13634 790 aa12.24□□□□□ -0.45
ATN1-202ENST00000396684 KLHDC9Q8NEP7 349 aa12.24□□□□□ -0.45
ATN1-202ENST00000396684 BHMTQ93088 406 aa12.24□□□□□ -0.45
ATN1-202ENST00000396684 FCRL2Q96LA5 508 aaPredicted RBP12.24□□□□□ -0.45
ATN1-202ENST00000396684 OXCT2Q9BYC2 517 aaPredicted RBP12.24□□□□□ -0.45
ATN1-202ENST00000396684 SPG21Q9NZD8 308 aa12.24□□□□□ -0.45
ATN1-202ENST00000396684 MSI1O43347 362 aaKnown RBP12.24□□□□□ -0.45
ATN1-202ENST00000396684 SHBGP04278 402 aa12.24□□□□□ -0.45
ATN1-202ENST00000396684 LAG3P18627 525 aa12.24□□□□□ -0.45
ATN1-202ENST00000396684 PBX3P40426 434 aa12.24□□□□□ -0.45
ATN1-202ENST00000396684 GLUD2P49448 558 aa12.24□□□□□ -0.45
ATN1-202ENST00000396684 RENBPP51606 427 aa12.24□□□□□ -0.45
ATN1-202ENST00000396684 CDK16Q00536 496 aa12.24□□□□□ -0.45
ATN1-202ENST00000396684 UGP2Q16851 508 aa12.24□□□□□ -0.45
ATN1-202ENST00000396684 PARP6Q2NL67 630 aa12.24□□□□□ -0.45
ATN1-202ENST00000396684 HECTD3Q5T447 861 aa12.24□□□□□ -0.45
ATN1-202ENST00000396684 MARC1Q5VT66 337 aa12.24□□□□□ -0.45
ATN1-202ENST00000396684 TTC39BQ5VTQ0 682 aaPredicted RBP12.24□□□□□ -0.45
ATN1-202ENST00000396684 MRPL10Q7Z7H8 261 aaKnown RBP12.24□□□□□ -0.45
ATN1-202ENST00000396684 NDUFAF2Q8N183 169 aa12.24□□□□□ -0.45
ATN1-202ENST00000396684 PCDH19Q8TAB3 1148 aa12.24□□□□□ -0.45
ATN1-202ENST00000396684 GSDMBQ8TAX9 411 aa12.24□□□□□ -0.45
ATN1-202ENST00000396684 PAAF1Q9BRP4 392 aa12.24□□□□□ -0.45
ATN1-202ENST00000396684 TLR5O60602 858 aa12.23□□□□□ -0.45
ATN1-202ENST00000396684 KLRC2P26717 231 aa12.23□□□□□ -0.45
ATN1-202ENST00000396684 ASPHQ12797 758 aa12.23□□□□□ -0.45
ATN1-202ENST00000396684 CA9Q16790 459 aa12.23□□□□□ -0.45
ATN1-202ENST00000396684 SYPL2Q5VXT5 272 aa12.23□□□□□ -0.45
ATN1-202ENST00000396684 TAC4Q86UU9 113 aa12.23□□□□□ -0.45
ATN1-202ENST00000396684 ZNF280BQ86YH2 543 aa12.23□□□□□ -0.45
ATN1-202ENST00000396684 PYROXD2Q8N2H3 581 aa12.23□□□□□ -0.45
ATN1-202ENST00000396684 FIBCD1Q8N539 461 aa12.23□□□□□ -0.45
ATN1-202ENST00000396684 SCAMP5Q8TAC9 235 aa12.23□□□□□ -0.45
ATN1-202ENST00000396684 SMOQ99835 787 aa12.23□□□□□ -0.45
ATN1-202ENST00000396684 GMIPQ9P107 970 aa12.23□□□□□ -0.45
ATN1-202ENST00000396684 TRIM49D1C9J1S8 452 aa12.23□□□□□ -0.45
ATN1-202ENST00000396684 PTPN7P35236 360 aa12.23□□□□□ -0.45
ATN1-202ENST00000396684 DPYSL2Q16555 572 aa12.23□□□□□ -0.45
ATN1-202ENST00000396684 ACCSLQ4AC99 568 aa12.23□□□□□ -0.45
ATN1-202ENST00000396684 LGI2Q8N0V4 545 aa12.23□□□□□ -0.45
ATN1-202ENST00000396684 SLCO2A1Q92959 643 aa12.23□□□□□ -0.45
ATN1-202ENST00000396684 LRRC39Q96DD0 335 aa12.23□□□□□ -0.45
ATN1-202ENST00000396684 PIWIL1Q96J94 861 aaKnown RBP12.23□□□□□ -0.45
ATN1-202ENST00000396684 CCT8L2Q96SF2 557 aa12.23□□□□□ -0.45
ATN1-202ENST00000396684 NT5MQ9NPB1 228 aa12.23□□□□□ -0.45
ATN1-202ENST00000396684 ARHGEF4Q9NR80 690 aa12.23□□□□□ -0.45
ATN1-202ENST00000396684 GRHL1Q9NZI5 618 aa12.23□□□□□ -0.45
ATN1-202ENST00000396684 DNMT3LQ9UJW3 386 aa12.23□□□□□ -0.45
ATN1-202ENST00000396684 DOCK5Q9H7D0 1870 aa12.23□□□□□ -0.45
ATN1-202ENST00000396684 TCP11X1B4DZS4 312 aa12.23□□□□□ -0.45
ATN1-202ENST00000396684 RHOCP08134 193 aa12.23□□□□□ -0.45
ATN1-202ENST00000396684 KRT4P19013 534 aa12.23□□□□□ -0.45
ATN1-202ENST00000396684 SPRP35270 261 aaPredicted RBP12.23□□□□□ -0.45
ATN1-202ENST00000396684 NNMTP40261 264 aa12.23□□□□□ -0.45
ATN1-202ENST00000396684 NUMBP49757 651 aa12.23□□□□□ -0.45
ATN1-202ENST00000396684 SEC24CP53992 1094 aa12.23□□□□□ -0.45
ATN1-202ENST00000396684 TRIM60Q495X7 471 aa12.23□□□□□ -0.45
ATN1-202ENST00000396684 ARHGAP15Q53QZ3 475 aa12.23□□□□□ -0.45
ATN1-202ENST00000396684 TTMPQ5BVD1 217 aa12.23□□□□□ -0.45
ATN1-202ENST00000396684 RAP1GAP2Q684P5 730 aa12.23□□□□□ -0.45
ATN1-202ENST00000396684 NETO2Q8NC67 525 aa12.23□□□□□ -0.45
ATN1-202ENST00000396684 CINPQ9BW66 212 aaPredicted RBP12.23□□□□□ -0.45
ATN1-202ENST00000396684 ENPP3O14638 875 aa12.23□□□□□ -0.45
ATN1-202ENST00000396684 PAGE1O75459 146 aa12.23□□□□□ -0.45
ATN1-202ENST00000396684 OXCT1P55809 520 aa12.23□□□□□ -0.45
ATN1-202ENST00000396684 MROH9Q5TGP6 573 aa12.23□□□□□ -0.45
ATN1-202ENST00000396684 KLC3Q6P597 504 aa12.23□□□□□ -0.45
ATN1-202ENST00000396684 OTOP2Q7RTS6 562 aa12.23□□□□□ -0.45
ATN1-202ENST00000396684 SLC26A11Q86WA9 606 aa12.23□□□□□ -0.45
ATN1-202ENST00000396684 SCG3Q8WXD2 468 aaKnown RBP12.23□□□□□ -0.45
ATN1-202ENST00000396684 CCT6BQ92526 530 aa12.23□□□□□ -0.45
ATN1-202ENST00000396684 PTPRN2Q92932 1015 aa12.23□□□□□ -0.45
ATN1-202ENST00000396684 CLTBP09497 229 aa12.22□□□□□ -0.45
ATN1-202ENST00000396684 PSMB4P28070 264 aa12.22□□□□□ -0.45
ATN1-202ENST00000396684 IFI35P80217 286 aaPredicted RBP12.22□□□□□ -0.45
ATN1-202ENST00000396684 RAD51Q06609 339 aa12.22□□□□□ -0.45
ATN1-202ENST00000396684 PABPC1LQ4VXU2 614 aaKnown RBP12.22□□□□□ -0.45
ATN1-202ENST00000396684 HIBCHQ6NVY1 386 aaPredicted RBP12.22□□□□□ -0.45
ATN1-202ENST00000396684 RPAINQ86UA6 219 aa12.22□□□□□ -0.45
ATN1-202ENST00000396684 HERC6Q8IVU3 1022 aa12.22□□□□□ -0.45
ATN1-202ENST00000396684 SLC35B2Q8TB61 432 aa12.22□□□□□ -0.45
ATN1-202ENST00000396684 THOC1Q96FV9 657 aaKnown RBP12.22□□□□□ -0.45
ATN1-202ENST00000396684 P2RY11Q96G91 374 aa12.22□□□□□ -0.45
ATN1-202ENST00000396684 B3GALT6Q96L58 329 aa12.22□□□□□ -0.45
ATN1-202ENST00000396684 EMILIN2Q9BXX0 1053 aa12.22□□□□□ -0.45
ATN1-202ENST00000396684 PIH1D1Q9NWS0 290 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms