RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 GSCP56915 257 aaPredicted RBP18.16■□□□□ 0.5
TNFSF13-205ENST00000396545 PSMC1P62191 440 aaKnown RBP18.16■□□□□ 0.5
TNFSF13-205ENST00000396545 C2CD6Q53TS8 623 aa18.16■□□□□ 0.5
TNFSF13-205ENST00000396545 SEL1L2Q5TEA6 688 aa18.16■□□□□ 0.5
TNFSF13-205ENST00000396545 C4orf50Q6ZRC1 276 aa18.16■□□□□ 0.5
TNFSF13-205ENST00000396545 ERICH1Q86X53 443 aa18.16■□□□□ 0.5
TNFSF13-205ENST00000396545 SCN4BQ8IWT1 228 aa18.16■□□□□ 0.5
TNFSF13-205ENST00000396545 CPA6Q8N4T0 437 aa18.16■□□□□ 0.5
TNFSF13-205ENST00000396545 WDTC1Q8N5D0 677 aa18.16■□□□□ 0.5
TNFSF13-205ENST00000396545 C1orf131Q8NDD1 294 aaKnown RBP18.16■□□□□ 0.5
TNFSF13-205ENST00000396545 CCDC26Q8TAB7 109 aa18.16■□□□□ 0.5
TNFSF13-205ENST00000396545 CASKIN2Q8WXE0 1202 aa18.16■□□□□ 0.5
TNFSF13-205ENST00000396545 MYLPFQ96A32 169 aa18.16■□□□□ 0.5
TNFSF13-205ENST00000396545 P2RY13Q9BPV8 354 aa18.16■□□□□ 0.5
TNFSF13-205ENST00000396545 CRTAC1Q9NQ79 661 aa18.16■□□□□ 0.5
TNFSF13-205ENST00000396545 PARVAQ9NVD7 372 aa18.16■□□□□ 0.5
TNFSF13-205ENST00000396545 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.16■□□□□ 0.5
TNFSF13-205ENST00000396545 HESX1Q9UBX0 185 aa18.16■□□□□ 0.5
TNFSF13-205ENST00000396545 CDH9Q9ULB4 789 aa18.16■□□□□ 0.5
TNFSF13-205ENST00000396545 HPCAL4Q9UM19 191 aa18.16■□□□□ 0.5
TNFSF13-205ENST00000396545 CNOT1A5YKK6 2376 aaKnown RBP18.16■□□□□ 0.5
TNFSF13-205ENST00000396545 CACNA1BQ00975 2339 aa18.16■□□□□ 0.5
TNFSF13-205ENST00000396545 GREB1Q4ZG55 1949 aa18.16■□□□□ 0.5
TNFSF13-205ENST00000396545 ATG2BQ96BY7 2078 aa18.15■□□□□ 0.5
TNFSF13-205ENST00000396545 C2orf78A6NCI8 922 aa18.15■□□□□ 0.5
TNFSF13-205ENST00000396545 ZSCAN5CA6NGD5 496 aaPredicted RBP18.15■□□□□ 0.5
TNFSF13-205ENST00000396545 FOXD2O60548 495 aaPredicted RBP18.15■□□□□ 0.5
TNFSF13-205ENST00000396545 RPP40O75818 363 aaKnown RBP18.15■□□□□ 0.5
TNFSF13-205ENST00000396545 TNNT3P45378 269 aaPredicted RBP18.15■□□□□ 0.5
TNFSF13-205ENST00000396545 CARSP49589 748 aaKnown RBP18.15■□□□□ 0.5
TNFSF13-205ENST00000396545 AADACL2Q6P093 401 aa18.15■□□□□ 0.5
TNFSF13-205ENST00000396545 MAATS1Q7Z4T9 603 aa18.15■□□□□ 0.5
TNFSF13-205ENST00000396545 STK32AQ8WU08 396 aa18.15■□□□□ 0.5
TNFSF13-205ENST00000396545 SEC14L1Q92503 715 aa18.15■□□□□ 0.5
TNFSF13-205ENST00000396545 ATP2A3Q93084 1043 aa18.15■□□□□ 0.5
TNFSF13-205ENST00000396545 SPATA17Q96L03 361 aa18.15■□□□□ 0.5
TNFSF13-205ENST00000396545 ACBD3Q9H3P7 528 aa18.15■□□□□ 0.5
TNFSF13-205ENST00000396545 DUS2Q9NX74 493 aaKnown RBP18.15■□□□□ 0.5
TNFSF13-205ENST00000396545 SLC8A2Q9UPR5 921 aa18.15■□□□□ 0.5
TNFSF13-205ENST00000396545 WNT6Q9Y6F9 365 aa18.15■□□□□ 0.5
TNFSF13-205ENST00000396545 KMT2BQ9UMN6 2715 aaPredicted RBP18.14■□□□□ 0.49
TNFSF13-205ENST00000396545 TCF3P15923 654 aa18.14■□□□□ 0.49
TNFSF13-205ENST00000396545 CYP1B1Q16678 543 aa18.14■□□□□ 0.49
TNFSF13-205ENST00000396545 EML3Q32P44 896 aa18.14■□□□□ 0.49
TNFSF13-205ENST00000396545 FBXO43Q4G163 708 aa18.14■□□□□ 0.49
TNFSF13-205ENST00000396545 DENND1BQ6P3S1 775 aa18.14■□□□□ 0.49
TNFSF13-205ENST00000396545 VSTM1Q6UX27 236 aa18.14■□□□□ 0.49
TNFSF13-205ENST00000396545 ACOT1Q86TX2 421 aa18.14■□□□□ 0.49
TNFSF13-205ENST00000396545 CAMKK1Q8N5S9 505 aa18.14■□□□□ 0.49
TNFSF13-205ENST00000396545 ARL14EPQ8N8R7 260 aaPredicted RBP18.14■□□□□ 0.49
TNFSF13-205ENST00000396545 EZH1Q92800 747 aaPredicted RBP18.14■□□□□ 0.49
TNFSF13-205ENST00000396545 LOXL4Q96JB6 756 aa18.14■□□□□ 0.49
TNFSF13-205ENST00000396545 CEP295NLQ96MC4 621 aa18.14■□□□□ 0.49
TNFSF13-205ENST00000396545 CYLDQ9NQC7 956 aa18.14■□□□□ 0.49
TNFSF13-205ENST00000396545 TSPAN16Q9UKR8 245 aa18.14■□□□□ 0.49
TNFSF13-205ENST00000396545 ARHGAP26Q9UNA1 814 aa18.14■□□□□ 0.49
TNFSF13-205ENST00000396545 PTPRDP23468 1912 aa18.14■□□□□ 0.49
TNFSF13-205ENST00000396545 M0QYV0 167 aa18.13■□□□□ 0.49
TNFSF13-205ENST00000396545 GDF9O60383 454 aa18.13■□□□□ 0.49
TNFSF13-205ENST00000396545 PHF2O75151 1096 aa18.13■□□□□ 0.49
TNFSF13-205ENST00000396545 GPD2P43304 727 aa18.13■□□□□ 0.49
TNFSF13-205ENST00000396545 GPS2Q13227 327 aa18.13■□□□□ 0.49
TNFSF13-205ENST00000396545 CUL1Q13616 776 aa18.13■□□□□ 0.49
TNFSF13-205ENST00000396545 MAPRE1Q15691 268 aaKnown RBP18.13■□□□□ 0.49
TNFSF13-205ENST00000396545 PPP1R15BQ5SWA1 713 aa18.13■□□□□ 0.49
TNFSF13-205ENST00000396545 SND1Q7KZF4 910 aaKnown RBP eCLIP18.13■□□□□ 0.49
TNFSF13-205ENST00000396545 PHLDB2Q86SQ0 1253 aa18.13■□□□□ 0.49
TNFSF13-205ENST00000396545 SLC13A5Q86YT5 568 aaPredicted RBP18.13■□□□□ 0.49
TNFSF13-205ENST00000396545 SH3RF2Q8TEC5 729 aa18.13■□□□□ 0.49
TNFSF13-205ENST00000396545 IPO4Q8TEX9 1081 aaKnown RBP18.13■□□□□ 0.49
TNFSF13-205ENST00000396545 EXOC4Q96A65 974 aa18.13■□□□□ 0.49
TNFSF13-205ENST00000396545 POLR3BQ9NW08 1133 aaPredicted RBP18.13■□□□□ 0.49
TNFSF13-205ENST00000396545 AMACRQ9UHK6 382 aa18.13■□□□□ 0.49
TNFSF13-205ENST00000396545 ESYT3A0FGR9 886 aa18.13■□□□□ 0.49
TNFSF13-205ENST00000396545 FAM187AA6NFU0 413 aa18.13■□□□□ 0.49
TNFSF13-205ENST00000396545 TMEM191CA6NGB0 347 aa18.13■□□□□ 0.49
TNFSF13-205ENST00000396545 H3BQF6 201 aa18.13■□□□□ 0.49
TNFSF13-205ENST00000396545 PSTPIP1O43586 416 aa18.13■□□□□ 0.49
TNFSF13-205ENST00000396545 BDNFP23560 247 aa18.13■□□□□ 0.49
TNFSF13-205ENST00000396545 OAS2P29728 719 aaKnown RBP18.13■□□□□ 0.49
TNFSF13-205ENST00000396545 GABRB2P47870 512 aa18.13■□□□□ 0.49
TNFSF13-205ENST00000396545 IFNAR2P48551 515 aa18.13■□□□□ 0.49
TNFSF13-205ENST00000396545 USP46P62068 366 aa18.13■□□□□ 0.49
TNFSF13-205ENST00000396545 DHX34Q14147 1143 aaKnown RBP18.13■□□□□ 0.49
TNFSF13-205ENST00000396545 SIX1Q15475 284 aaPredicted RBP18.13■□□□□ 0.49
TNFSF13-205ENST00000396545 PKDCCQ504Y2 493 aa18.13■□□□□ 0.49
TNFSF13-205ENST00000396545 KBTBD6Q86V97 674 aa18.13■□□□□ 0.49
TNFSF13-205ENST00000396545 PRELID2Q8N945 189 aa18.13■□□□□ 0.49
TNFSF13-205ENST00000396545 B3GALNT2Q8NCR0 500 aa18.13■□□□□ 0.49
TNFSF13-205ENST00000396545 C3orf20Q8ND61 904 aa18.13■□□□□ 0.49
TNFSF13-205ENST00000396545 TTC16Q8NEE8 873 aa18.13■□□□□ 0.49
TNFSF13-205ENST00000396545 MYCBPAPQ8TBZ2 947 aa18.13■□□□□ 0.49
TNFSF13-205ENST00000396545 C18orf8Q96DM3 657 aa18.13■□□□□ 0.49
TNFSF13-205ENST00000396545 PCED1BQ96HM7 432 aa18.13■□□□□ 0.49
TNFSF13-205ENST00000396545 ST7Q9NRC1 585 aa18.13■□□□□ 0.49
TNFSF13-205ENST00000396545 IP6K2Q9UHH9 426 aa18.13■□□□□ 0.49
TNFSF13-205ENST00000396545 EML5Q05BV3 1969 aa18.12■□□□□ 0.49
TNFSF13-205ENST00000396545 HELZP42694 1942 aaKnown RBP18.12■□□□□ 0.49
TNFSF13-205ENST00000396545 EPN2O95208 641 aa18.12■□□□□ 0.49
TNFSF13-205ENST00000396545 PDGFRBP09619 1106 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms