RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 PFKFB1P16118 471 aa18.23■□□□□ 0.51
EXOSC3-202ENST00000396521 ST8SIA6P61647 398 aa18.23■□□□□ 0.51
EXOSC3-202ENST00000396521 ARID5BQ14865 1188 aa18.23■□□□□ 0.51
EXOSC3-202ENST00000396521 NUGGCQ68CJ6 796 aa18.23■□□□□ 0.51
EXOSC3-202ENST00000396521 CYB5D2Q8WUJ1 264 aa18.23■□□□□ 0.51
EXOSC3-202ENST00000396521 LRIG1Q96JA1 1093 aa18.23■□□□□ 0.51
EXOSC3-202ENST00000396521 RSPH9Q9H1X1 276 aaPredicted RBP18.23■□□□□ 0.51
EXOSC3-202ENST00000396521 MMRN2Q9H8L6 949 aa18.23■□□□□ 0.51
EXOSC3-202ENST00000396521 HPSEQ9Y251 543 aa18.23■□□□□ 0.51
EXOSC3-202ENST00000396521 BTBD3Q9Y2F9 522 aa18.23■□□□□ 0.51
EXOSC3-202ENST00000396521 CKAP5Q14008 2032 aa18.23■□□□□ 0.51
EXOSC3-202ENST00000396521 LOC400499M0QZD8 3231 aa18.22■□□□□ 0.51
EXOSC3-202ENST00000396521 A0A1B0GVL5 298 aa18.22■□□□□ 0.51
EXOSC3-202ENST00000396521 TYW5A2RUC4 315 aaKnown RBP18.22■□□□□ 0.51
EXOSC3-202ENST00000396521 CETN3O15182 167 aa18.22■□□□□ 0.51
EXOSC3-202ENST00000396521 EPB41P11171 864 aaKnown RBP18.22■□□□□ 0.51
EXOSC3-202ENST00000396521 HNF1BP35680 557 aa18.22■□□□□ 0.51
EXOSC3-202ENST00000396521 SYKP43405 635 aa18.22■□□□□ 0.51
EXOSC3-202ENST00000396521 DNM1Q05193 864 aaKnown RBP18.22■□□□□ 0.51
EXOSC3-202ENST00000396521 ZCWPW2Q504Y3 356 aa18.22■□□□□ 0.51
EXOSC3-202ENST00000396521 KIAA0895LQ68EN5 471 aa18.22■□□□□ 0.51
EXOSC3-202ENST00000396521 MSANTD2Q6P1R3 559 aa18.22■□□□□ 0.51
EXOSC3-202ENST00000396521 BHLHA9Q7RTU4 235 aa18.22■□□□□ 0.51
EXOSC3-202ENST00000396521 CCDC117Q8IWD4 279 aaPredicted RBP18.22■□□□□ 0.51
EXOSC3-202ENST00000396521 IRGQQ8WZA9 623 aa18.22■□□□□ 0.51
EXOSC3-202ENST00000396521 TSPAN16Q9UKR8 245 aa18.22■□□□□ 0.51
EXOSC3-202ENST00000396521 COQ4Q9Y3A0 265 aa18.22■□□□□ 0.51
EXOSC3-202ENST00000396521 CELSR3Q9NYQ7 3312 aa18.22■□□□□ 0.51
EXOSC3-202ENST00000396521 GOLGA4Q13439 2230 aaKnown RBP18.22■□□□□ 0.51
EXOSC3-202ENST00000396521 ASXL3Q9C0F0 2248 aa18.22■□□□□ 0.51
EXOSC3-202ENST00000396521 FAM237AA0A1B0GTK4 181 aa18.21■□□□□ 0.51
EXOSC3-202ENST00000396521 A0A1B0GTQ1 180 aa18.21■□□□□ 0.51
EXOSC3-202ENST00000396521 A0A1W2PPC4 97 aa18.21■□□□□ 0.51
EXOSC3-202ENST00000396521 LRRC72A6NJI9 287 aa18.21■□□□□ 0.51
EXOSC3-202ENST00000396521 GOLGA8CPA6NN73 597 aa18.21■□□□□ 0.51
EXOSC3-202ENST00000396521 H0Y8X5 98 aa18.21■□□□□ 0.51
EXOSC3-202ENST00000396521 VDRP11473 427 aa18.21■□□□□ 0.51
EXOSC3-202ENST00000396521 ADIGQ0VDE8 80 aa18.21■□□□□ 0.51
EXOSC3-202ENST00000396521 GOLGA7BQ2TAP0 167 aa18.21■□□□□ 0.51
EXOSC3-202ENST00000396521 FIBINQ8TAL6 211 aa18.21■□□□□ 0.51
EXOSC3-202ENST00000396521 SEMA4DQ92854 862 aa18.21■□□□□ 0.51
EXOSC3-202ENST00000396521 TTC17Q96AE7 1141 aa18.21■□□□□ 0.51
EXOSC3-202ENST00000396521 ELF4Q99607 663 aaPredicted RBP18.21■□□□□ 0.51
EXOSC3-202ENST00000396521 PABPC3Q9H361 631 aaKnown RBP18.21■□□□□ 0.51
EXOSC3-202ENST00000396521 FBXL12Q9NXK8 326 aa18.21■□□□□ 0.51
EXOSC3-202ENST00000396521 FZD4Q9ULV1 537 aa18.21■□□□□ 0.51
EXOSC3-202ENST00000396521 SMG1Q96Q15 3661 aaKnown RBP18.21■□□□□ 0.51
EXOSC3-202ENST00000396521 PLXNB3Q9ULL4 1909 aa18.2■□□□□ 0.5
EXOSC3-202ENST00000396521 TARSL2A2RTX5 802 aaKnown RBP18.2■□□□□ 0.5
EXOSC3-202ENST00000396521 YJEFN3A6XGL0 299 aa18.2■□□□□ 0.5
EXOSC3-202ENST00000396521 E7ENQ6 273 aa18.2■□□□□ 0.5
EXOSC3-202ENST00000396521 TK2O00142 265 aa18.2■□□□□ 0.5
EXOSC3-202ENST00000396521 TBXAS1P24557 533 aaPredicted RBP18.2■□□□□ 0.5
EXOSC3-202ENST00000396521 DPYDQ12882 1025 aa18.2■□□□□ 0.5
EXOSC3-202ENST00000396521 CUL2Q13617 745 aa18.2■□□□□ 0.5
EXOSC3-202ENST00000396521 HNRNPA1L2Q32P51 320 aaKnown RBP18.2■□□□□ 0.5
EXOSC3-202ENST00000396521 C6orf118Q5T5N4 469 aa18.2■□□□□ 0.5
EXOSC3-202ENST00000396521 PIK3R6Q5UE93 754 aa18.2■□□□□ 0.5
EXOSC3-202ENST00000396521 GANCQ8TET4 914 aa18.2■□□□□ 0.5
EXOSC3-202ENST00000396521 EDEM1Q92611 657 aa18.2■□□□□ 0.5
EXOSC3-202ENST00000396521 NXPE2Q96DL1 559 aa18.2■□□□□ 0.5
EXOSC3-202ENST00000396521 ORAI3Q9BRQ5 295 aa18.2■□□□□ 0.5
EXOSC3-202ENST00000396521 ADAMTS1Q9UHI8 967 aa18.2■□□□□ 0.5
EXOSC3-202ENST00000396521 SFMBT1Q9UHJ3 866 aa18.2■□□□□ 0.5
EXOSC3-202ENST00000396521 MAPK8IP1Q9UQF2 711 aa18.2■□□□□ 0.5
EXOSC3-202ENST00000396521 SLCO1B1Q9Y6L6 691 aa18.2■□□□□ 0.5
EXOSC3-202ENST00000396521 IGLV3-27P01718 113 aa18.19■□□□□ 0.5
EXOSC3-202ENST00000396521 IGHV4-34P06331 123 aa18.19■□□□□ 0.5
EXOSC3-202ENST00000396521 JUPP14923 745 aa18.19■□□□□ 0.5
EXOSC3-202ENST00000396521 CCR5P51681 352 aa18.19■□□□□ 0.5
EXOSC3-202ENST00000396521 GALCP54803 685 aa18.19■□□□□ 0.5
EXOSC3-202ENST00000396521 DAOAP59103 153 aa18.19■□□□□ 0.5
EXOSC3-202ENST00000396521 STILQ15468 1287 aa18.19■□□□□ 0.5
EXOSC3-202ENST00000396521 SLC45A4Q5BKX6 768 aa18.19■□□□□ 0.5
EXOSC3-202ENST00000396521 MFN1Q8IWA4 741 aa18.19■□□□□ 0.5
EXOSC3-202ENST00000396521 HSCBQ8IWL3 235 aa18.19■□□□□ 0.5
EXOSC3-202ENST00000396521 OXR1Q8N573 874 aa18.19■□□□□ 0.5
EXOSC3-202ENST00000396521 ZNF366Q8N895 744 aa18.19■□□□□ 0.5
EXOSC3-202ENST00000396521 HJURPQ8NCD3 748 aaPredicted RBP18.19■□□□□ 0.5
EXOSC3-202ENST00000396521 OR2T34Q8NGX1 318 aa18.19■□□□□ 0.5
EXOSC3-202ENST00000396521 SPATA32Q96LK8 384 aa18.19■□□□□ 0.5
EXOSC3-202ENST00000396521 UBL7Q96S82 380 aaPredicted RBP18.19■□□□□ 0.5
EXOSC3-202ENST00000396521 TULP2O00295 520 aa18.18■□□□□ 0.5
EXOSC3-202ENST00000396521 O00370 1275 aa18.18■□□□□ 0.5
EXOSC3-202ENST00000396521 ACSL4O60488 711 aa18.18■□□□□ 0.5
EXOSC3-202ENST00000396521 TBL1XO60907 577 aa18.18■□□□□ 0.5
EXOSC3-202ENST00000396521 ITGAVP06756 1048 aa18.18■□□□□ 0.5
EXOSC3-202ENST00000396521 SRPRAP08240 638 aaKnown RBP18.18■□□□□ 0.5
EXOSC3-202ENST00000396521 PAEPP09466 180 aa18.18■□□□□ 0.5
EXOSC3-202ENST00000396521 CD19P15391 556 aa18.18■□□□□ 0.5
EXOSC3-202ENST00000396521 ABCB4P21439 1286 aa18.18■□□□□ 0.5
EXOSC3-202ENST00000396521 ABCG1P45844 678 aa18.18■□□□□ 0.5
EXOSC3-202ENST00000396521 ARRB1P49407 418 aaPredicted RBP18.18■□□□□ 0.5
EXOSC3-202ENST00000396521 ILKQ13418 452 aa18.18■□□□□ 0.5
EXOSC3-202ENST00000396521 NNTQ13423 1086 aa18.18■□□□□ 0.5
EXOSC3-202ENST00000396521 LCLAT1Q6UWP7 414 aa18.18■□□□□ 0.5
EXOSC3-202ENST00000396521 DHRS13Q6UX07 377 aa18.18■□□□□ 0.5
EXOSC3-202ENST00000396521 LSM14AQ8ND56 463 aaKnown RBP18.18■□□□□ 0.5
EXOSC3-202ENST00000396521 NDRG1Q92597 394 aaKnown RBP18.18■□□□□ 0.5
EXOSC3-202ENST00000396521 TATDN2Q93075 761 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms