RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 ZNF638Q14966 1978 aaKnown RBP9.56□□□□□ -0.88
NDE1-201ENST00000396354 TM9SF1O15321 606 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 PGM3O95394 542 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 AMHP03971 560 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 MCF2P10911 925 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 SP100P23497 879 aaPredicted RBP9.56□□□□□ -0.88
NDE1-201ENST00000396354 SKIV2L2P42285 1042 aaKnown RBP9.56□□□□□ -0.88
NDE1-201ENST00000396354 ASPHQ12797 758 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 TFDP2Q14188 446 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 GRB14Q14449 540 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 TRIP10Q15642 601 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 CCL14Q16627 93 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 SPRYD7Q5W111 196 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 SAPCD2Q86UD0 394 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 C10orf107Q8IVU9 208 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.56□□□□□ -0.88
NDE1-201ENST00000396354 ZNF276Q8N554 614 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 NIPA2Q8N8Q9 360 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 PIP4K2CQ8TBX8 421 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 MZB1Q8WU39 189 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 OSMRQ99650 979 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 PHACTR1Q9C0D0 580 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 NXF3Q9H4D5 531 aaKnown RBP9.56□□□□□ -0.88
NDE1-201ENST00000396354 WDR55Q9H6Y2 383 aaPredicted RBP9.56□□□□□ -0.88
NDE1-201ENST00000396354 PCDH18Q9HCL0 1135 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 ABT1Q9ULW3 272 aaKnown RBP9.56□□□□□ -0.88
NDE1-201ENST00000396354 SNX10Q9Y5X0 201 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 SLC15A5A6NIM6 579 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 MAGEB2O15479 319 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 TRPA1O75762 1119 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 ARSAP15289 507 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 ATP6V1B1P15313 513 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 LMO2P25791 158 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 PKNOX1P55347 436 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 SARNPP82979 210 aaKnown RBP9.56□□□□□ -0.88
NDE1-201ENST00000396354 CCDC15Q0P6D6 951 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 NOMO1Q15155 1222 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 HSF5Q4G112 596 aaPredicted RBP9.56□□□□□ -0.88
NDE1-201ENST00000396354 PAN2Q504Q3 1202 aaKnown RBP9.56□□□□□ -0.88
NDE1-201ENST00000396354 PID1Q7Z2X4 250 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 RASSF3Q86WH2 238 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 TTC30AQ86WT1 665 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 TDRPQ86YL5 185 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 FAM156AQ8NDB6 213 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 STKLD1Q8NE28 680 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 ZNF483Q8TF39 744 aaPredicted RBP9.56□□□□□ -0.88
NDE1-201ENST00000396354 EMID1Q96A84 441 aaPredicted RBP9.56□□□□□ -0.88
NDE1-201ENST00000396354 PTCD3Q96EY7 689 aaKnown RBP9.56□□□□□ -0.88
NDE1-201ENST00000396354 ZNF333Q96JL9 665 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 CNPY3Q9BT09 278 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 VTA1Q9NP79 307 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 BATF3Q9NR55 127 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 PAPOLBQ9NRJ5 636 aaKnown RBP9.56□□□□□ -0.88
NDE1-201ENST00000396354 DPP3Q9NY33 737 aa9.56□□□□□ -0.88
NDE1-201ENST00000396354 PDCD11Q14690 1871 aaKnown RBP9.55□□□□□ -0.88
NDE1-201ENST00000396354 GPR32O75388 356 aa9.55□□□□□ -0.88
NDE1-201ENST00000396354 IL18RAPO95256 599 aa9.55□□□□□ -0.88
NDE1-201ENST00000396354 APOEP02649 317 aa9.55□□□□□ -0.88
NDE1-201ENST00000396354 ZNF143P52747 638 aaPredicted RBP9.55□□□□□ -0.88
NDE1-201ENST00000396354 LGSNQ5TDP6 509 aa9.55□□□□□ -0.88
NDE1-201ENST00000396354 LRRC38Q5VT99 294 aa9.55□□□□□ -0.88
NDE1-201ENST00000396354 OLFML2BQ68BL8 750 aa9.55□□□□□ -0.88
NDE1-201ENST00000396354 SDCCAG8Q86SQ7 713 aaPredicted RBP9.55□□□□□ -0.88
NDE1-201ENST00000396354 RNF135Q8IUD6 432 aa9.55□□□□□ -0.88
NDE1-201ENST00000396354 DEFB107AQ8IZN7 70 aa9.55□□□□□ -0.88
NDE1-201ENST00000396354 PHTF2Q8N3S3 785 aa9.55□□□□□ -0.88
NDE1-201ENST00000396354 KHSRPQ92945 711 aaKnown RBP eCLIP9.55□□□□□ -0.88
NDE1-201ENST00000396354 AGAP2Q99490 1192 aa9.55□□□□□ -0.88
NDE1-201ENST00000396354 NT5C1AQ9BXI3 368 aa9.55□□□□□ -0.88
NDE1-201ENST00000396354 ATXN3LQ9H3M9 355 aa9.55□□□□□ -0.88
NDE1-201ENST00000396354 POPDC2Q9HBU9 364 aa9.55□□□□□ -0.88
NDE1-201ENST00000396354 MORF4L1Q9UBU8 362 aa9.55□□□□□ -0.88
NDE1-201ENST00000396354 CPA4Q9UI42 421 aa9.55□□□□□ -0.88
NDE1-201ENST00000396354 PLLPQ9Y342 182 aa9.55□□□□□ -0.88
NDE1-201ENST00000396354 RPS6KL1Q9Y6S9 549 aa9.55□□□□□ -0.88
NDE1-201ENST00000396354 RALGAPA2Q2PPJ7 1873 aa9.55□□□□□ -0.88
NDE1-201ENST00000396354 SMAPO00193 183 aa9.55□□□□□ -0.88
NDE1-201ENST00000396354 SPTLC1O15269 473 aa9.55□□□□□ -0.88
NDE1-201ENST00000396354 RFPL1O75677 317 aa9.55□□□□□ -0.88
NDE1-201ENST00000396354 HOXD8P13378 290 aaPredicted RBP9.55□□□□□ -0.88
NDE1-201ENST00000396354 PSMB4P28070 264 aa9.55□□□□□ -0.88
NDE1-201ENST00000396354 ETV4P43268 484 aa9.55□□□□□ -0.88
NDE1-201ENST00000396354 DUSP28Q4G0W2 176 aa9.55□□□□□ -0.88
NDE1-201ENST00000396354 SLC30A9Q6PML9 568 aa9.55□□□□□ -0.88
NDE1-201ENST00000396354 RASAL3Q86YV0 1011 aa9.55□□□□□ -0.88
NDE1-201ENST00000396354 GALNT4Q8N4A0 578 aa9.55□□□□□ -0.88
NDE1-201ENST00000396354 RNF169Q8NCN4 708 aa9.55□□□□□ -0.88
NDE1-201ENST00000396354 OR6J1Q8NGC5 347 aa9.55□□□□□ -0.88
NDE1-201ENST00000396354 SKA1Q96BD8 255 aa9.55□□□□□ -0.88
NDE1-201ENST00000396354 MCRS1Q96EZ8 462 aa9.55□□□□□ -0.88
NDE1-201ENST00000396354 TUBGCP5Q96RT8 1024 aa9.55□□□□□ -0.88
NDE1-201ENST00000396354 MPHOSPH6Q99547 160 aaKnown RBP9.55□□□□□ -0.88
NDE1-201ENST00000396354 FOXP3Q9BZS1 431 aa9.55□□□□□ -0.88
NDE1-201ENST00000396354 TRIM4Q9C037 500 aa9.55□□□□□ -0.88
NDE1-201ENST00000396354 LHX5Q9H2C1 402 aa9.55□□□□□ -0.88
NDE1-201ENST00000396354 USP29Q9HBJ7 922 aa9.55□□□□□ -0.88
NDE1-201ENST00000396354 KRT82Q9NSB4 513 aa9.55□□□□□ -0.88
NDE1-201ENST00000396354 PAK5Q9P286 719 aa9.55□□□□□ -0.88
NDE1-201ENST00000396354 AP4E1Q9UPM8 1137 aa9.55□□□□□ -0.88
NDE1-201ENST00000396354 APOBEC2Q9Y235 224 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms