RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 SYDE1Q6ZW31 735 aaPredicted RBP15.9■□□□□ 0.14
VAMP1-202ENST00000396308 ANKS1BQ7Z6G8 1248 aa15.9■□□□□ 0.14
VAMP1-202ENST00000396308 DENND1CQ8IV53 801 aa15.9■□□□□ 0.14
VAMP1-202ENST00000396308 CDKL3Q8IVW4 592 aaPredicted RBP15.9■□□□□ 0.14
VAMP1-202ENST00000396308 LZTR1Q8N653 840 aa15.9■□□□□ 0.14
VAMP1-202ENST00000396308 LRRN4CLQ8ND94 238 aa15.9■□□□□ 0.14
VAMP1-202ENST00000396308 ACTL9Q8TC94 416 aa15.9■□□□□ 0.14
VAMP1-202ENST00000396308 ZNF707Q96C28 371 aaPredicted RBP15.9■□□□□ 0.14
VAMP1-202ENST00000396308 GAS2L1Q99501 681 aaPredicted RBP15.9■□□□□ 0.14
VAMP1-202ENST00000396308 RHOXF2Q9BQY4 288 aa15.9■□□□□ 0.14
VAMP1-202ENST00000396308 ZYG11BQ9C0D3 744 aa15.9■□□□□ 0.14
VAMP1-202ENST00000396308 RNF38Q9H0F5 515 aa15.9■□□□□ 0.14
VAMP1-202ENST00000396308 PRDM12Q9H4Q4 367 aa15.9■□□□□ 0.14
VAMP1-202ENST00000396308 PCYOX1Q9UHG3 505 aa15.9■□□□□ 0.14
VAMP1-202ENST00000396308 ZNF148Q9UQR1 794 aa15.9■□□□□ 0.14
VAMP1-202ENST00000396308 UTP11Q9Y3A2 253 aaKnown RBP15.9■□□□□ 0.14
VAMP1-202ENST00000396308 COL6A3P12111 3177 aa15.89■□□□□ 0.13
VAMP1-202ENST00000396308 CFAP69A5D8W1 941 aa15.89■□□□□ 0.13
VAMP1-202ENST00000396308 H7C0C1 242 aa15.89■□□□□ 0.13
VAMP1-202ENST00000396308 DLL1O00548 723 aa15.89■□□□□ 0.13
VAMP1-202ENST00000396308 NCAM2O15394 837 aa15.89■□□□□ 0.13
VAMP1-202ENST00000396308 GJA1P17302 382 aa15.89■□□□□ 0.13
VAMP1-202ENST00000396308 ERCC2P18074 760 aa15.89■□□□□ 0.13
VAMP1-202ENST00000396308 MX2P20592 715 aa15.89■□□□□ 0.13
VAMP1-202ENST00000396308 TACR2P21452 398 aa15.89■□□□□ 0.13
VAMP1-202ENST00000396308 IL4RP24394 825 aa15.89■□□□□ 0.13
VAMP1-202ENST00000396308 GTF2F1P35269 517 aaKnown RBP eCLIP15.89■□□□□ 0.13
VAMP1-202ENST00000396308 ATP5OP48047 213 aa15.89■□□□□ 0.13
VAMP1-202ENST00000396308 KCNQ1P51787 676 aa15.89■□□□□ 0.13
VAMP1-202ENST00000396308 VCPP55072 806 aaKnown RBP15.89■□□□□ 0.13
VAMP1-202ENST00000396308 AUHQ13825 339 aaKnown RBP15.89■□□□□ 0.13
VAMP1-202ENST00000396308 PIK3R6Q5UE93 754 aa15.89■□□□□ 0.13
VAMP1-202ENST00000396308 TTC39BQ5VTQ0 682 aaPredicted RBP15.89■□□□□ 0.13
VAMP1-202ENST00000396308 NCBP2-AS2Q69YL0 99 aa15.89■□□□□ 0.13
VAMP1-202ENST00000396308 ANKRD54Q6NXT1 300 aa15.89■□□□□ 0.13
VAMP1-202ENST00000396308 CMTM8Q8IZV2 173 aa15.89■□□□□ 0.13
VAMP1-202ENST00000396308 GPR161Q8N6U8 529 aaKnown RBP15.89■□□□□ 0.13
VAMP1-202ENST00000396308 PQLC3Q8N755 202 aa15.89■□□□□ 0.13
VAMP1-202ENST00000396308 PLD5Q8N7P1 536 aa15.89■□□□□ 0.13
VAMP1-202ENST00000396308 TTC16Q8NEE8 873 aa15.89■□□□□ 0.13
VAMP1-202ENST00000396308 VN1R2Q8NFZ6 395 aa15.89■□□□□ 0.13
VAMP1-202ENST00000396308 ATL2Q8NHH9 583 aa15.89■□□□□ 0.13
VAMP1-202ENST00000396308 CCHCR1Q8TD31 782 aa15.89■□□□□ 0.13
VAMP1-202ENST00000396308 RSAD2Q8WXG1 361 aa15.89■□□□□ 0.13
VAMP1-202ENST00000396308 ATG4AQ8WYN0 398 aa15.89■□□□□ 0.13
VAMP1-202ENST00000396308 RPRD1AQ96P16 312 aaPredicted RBP15.89■□□□□ 0.13
VAMP1-202ENST00000396308 HERPUD2Q9BSE4 406 aa15.89■□□□□ 0.13
VAMP1-202ENST00000396308 RETREG1Q9H6L5 497 aa15.89■□□□□ 0.13
VAMP1-202ENST00000396308 KIF9Q9HAQ2 790 aa15.89■□□□□ 0.13
VAMP1-202ENST00000396308 ANLNQ9NQW6 1124 aa15.89■□□□□ 0.13
VAMP1-202ENST00000396308 PPARGC1AQ9UBK2 798 aaKnown RBP15.89■□□□□ 0.13
VAMP1-202ENST00000396308 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.89■□□□□ 0.13
VAMP1-202ENST00000396308 VANGL2Q9ULK5 521 aa15.89■□□□□ 0.13
VAMP1-202ENST00000396308 ARHGAP26Q9UNA1 814 aa15.89■□□□□ 0.13
VAMP1-202ENST00000396308 R3HDM2Q9Y2K5 976 aaKnown RBP15.89■□□□□ 0.13
VAMP1-202ENST00000396308 V9GYY5 206 aaPredicted RBP15.89■□□□□ 0.13
VAMP1-202ENST00000396308 TARSL2A2RTX5 802 aaKnown RBP15.88■□□□□ 0.13
VAMP1-202ENST00000396308 HACD1B0YJ81 288 aa15.88■□□□□ 0.13
VAMP1-202ENST00000396308 FAM72CH0Y354 149 aa15.88■□□□□ 0.13
VAMP1-202ENST00000396308 CTIFO43310 598 aaKnown RBP15.88■□□□□ 0.13
VAMP1-202ENST00000396308 STK10O94804 968 aaKnown RBP15.88■□□□□ 0.13
VAMP1-202ENST00000396308 PAPLNO95428 1278 aa15.88■□□□□ 0.13
VAMP1-202ENST00000396308 ITGAVP06756 1048 aa15.88■□□□□ 0.13
VAMP1-202ENST00000396308 RHOQP17081 205 aa15.88■□□□□ 0.13
VAMP1-202ENST00000396308 FSHRP23945 695 aa15.88■□□□□ 0.13
VAMP1-202ENST00000396308 HOXC13P31276 330 aa15.88■□□□□ 0.13
VAMP1-202ENST00000396308 ACTN2P35609 894 aa15.88■□□□□ 0.13
VAMP1-202ENST00000396308 GGCXP38435 758 aa15.88■□□□□ 0.13
VAMP1-202ENST00000396308 XRCC4Q13426 336 aa15.88■□□□□ 0.13
VAMP1-202ENST00000396308 KCNC3Q14003 757 aa15.88■□□□□ 0.13
VAMP1-202ENST00000396308 PAFAH1B3Q15102 231 aaKnown RBP15.88■□□□□ 0.13
VAMP1-202ENST00000396308 PDK1Q15118 436 aa15.88■□□□□ 0.13
VAMP1-202ENST00000396308 ERCC6LQ2NKX8 1250 aa15.88■□□□□ 0.13
VAMP1-202ENST00000396308 PRSS36Q5K4E3 855 aa15.88■□□□□ 0.13
VAMP1-202ENST00000396308 ADGRF1Q5T601 910 aa15.88■□□□□ 0.13
VAMP1-202ENST00000396308 FAM72AQ5TYM5 149 aa15.88■□□□□ 0.13
VAMP1-202ENST00000396308 MANEALQ5VSG8 457 aa15.88■□□□□ 0.13
VAMP1-202ENST00000396308 FAM72DQ6L9T8 149 aa15.88■□□□□ 0.13
VAMP1-202ENST00000396308 DARS2Q6PI48 645 aaKnown RBP15.88■□□□□ 0.13
VAMP1-202ENST00000396308 EP400NLQ6ZTU2 488 aa15.88■□□□□ 0.13
VAMP1-202ENST00000396308 FAM72BQ86X60 149 aa15.88■□□□□ 0.13
VAMP1-202ENST00000396308 CCDC117Q8IWD4 279 aaPredicted RBP15.88■□□□□ 0.13
VAMP1-202ENST00000396308 LGI2Q8N0V4 545 aa15.88■□□□□ 0.13
VAMP1-202ENST00000396308 C12orf76Q8N812 135 aaPredicted RBP15.88■□□□□ 0.13
VAMP1-202ENST00000396308 CCDC89Q8N998 374 aa15.88■□□□□ 0.13
VAMP1-202ENST00000396308 NKD2Q969F2 451 aaPredicted RBP15.88■□□□□ 0.13
VAMP1-202ENST00000396308 TCEAL4Q96EI5 215 aa15.88■□□□□ 0.13
VAMP1-202ENST00000396308 CYP2S1Q96SQ9 504 aa15.88■□□□□ 0.13
VAMP1-202ENST00000396308 GKN1Q9NS71 199 aa15.88■□□□□ 0.13
VAMP1-202ENST00000396308 CFAP97Q9P2B7 532 aa15.88■□□□□ 0.13
VAMP1-202ENST00000396308 AMACRQ9UHK6 382 aa15.88■□□□□ 0.13
VAMP1-202ENST00000396308 XPO7Q9UIA9 1087 aaKnown RBP15.88■□□□□ 0.13
VAMP1-202ENST00000396308 SNX10Q9Y5X0 201 aa15.88■□□□□ 0.13
VAMP1-202ENST00000396308 I6L893 689 aaPredicted RBP15.87■□□□□ 0.13
VAMP1-202ENST00000396308 SGK1O00141 431 aa15.87■□□□□ 0.13
VAMP1-202ENST00000396308 NDC80O14777 642 aa15.87■□□□□ 0.13
VAMP1-202ENST00000396308 DCLK1O15075 740 aa15.87■□□□□ 0.13
VAMP1-202ENST00000396308 RAD51CO43502 376 aa15.87■□□□□ 0.13
VAMP1-202ENST00000396308 MFSD11O43934 449 aa15.87■□□□□ 0.13
VAMP1-202ENST00000396308 HEXIM1O94992 359 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms