RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 NXF3Q9H4D5 531 aaKnown RBP3.48□□□□□ -1.85
VPS13C-203ENST00000395896 RAD18Q9NS91 495 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 SLC30A1Q9Y6M5 507 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 MAP3K7O43318 606 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 HLA-DPA1P20036 260 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 GPD2P43304 727 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 TBX4P57082 545 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 HSP90AA5PQ58FG0 334 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 ARHGEF19Q8IW93 802 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 CATSPER1Q8NEC5 780 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 BSNDQ8WZ55 320 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 PANX3Q96QZ0 392 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 TMCO1Q9UM00 188 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 hCG_1818297A0A087WSY0 165 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 F8VP50 259 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 GPR25O00155 361 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 ALOX15BO15296 676 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 SNX2O60749 519 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 TPSB2P20231 275 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 ADRA1BP35368 520 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 MGAT5Q09328 741 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 ITGA9Q13797 1035 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 RFTN1Q14699 578 aaPredicted RBP3.48□□□□□ -1.85
VPS13C-203ENST00000395896 TPSAB1Q15661 275 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 HECTD3Q5T447 861 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 NECAB2Q7Z6G3 386 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 CHCHD4Q8N4Q1 142 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 ALLCQ8N6M5 410 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 CACYBPQ9HB71 228 aaKnown RBP3.48□□□□□ -1.85
VPS13C-203ENST00000395896 SPATS2LQ9NUQ6 558 aaKnown RBP3.48□□□□□ -1.85
VPS13C-203ENST00000395896 RGS17Q9UGC6 210 aaPredicted RBP3.48□□□□□ -1.85
VPS13C-203ENST00000395896 CACNA1DQ01668 2161 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 TLR5O60602 858 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 RGS7P49802 495 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 ABCE1P61221 599 aaKnown RBP3.48□□□□□ -1.85
VPS13C-203ENST00000395896 SLC20A2Q08357 652 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 STX5Q13190 355 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 KBTBD12Q3ZCT8 623 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 ZDHHC20Q5W0Z9 365 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 GJB7Q6PEY0 223 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 TMC7Q7Z402 723 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 CDR2LQ86X02 465 aaPredicted RBP3.48□□□□□ -1.85
VPS13C-203ENST00000395896 ANKLE1Q8NAG6 615 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 MCUQ8NE86 351 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 SGIP1Q9BQI5 828 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 SPON2Q9BUD6 331 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 MAGED2Q9UNF1 606 aaPredicted RBP3.48□□□□□ -1.85
VPS13C-203ENST00000395896 TMEM189-UBE2V1I3L0A0 370 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 DNM1LO00429 736 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 COL6A2P12110 1019 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 PBX3P40426 434 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 KCNJ1P48048 391 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 TEX44Q53QW1 395 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 SPOPLQ6IQ16 392 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 TAPT1Q6NXT6 567 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 CERS6Q6ZMG9 384 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 CYS1Q717R9 158 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 LRRC8DQ7L1W4 858 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 FAM71DQ8N9W8 422 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 TRAPPC12Q8WVT3 735 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 SEPT5Q99719 369 aaPredicted RBP3.47□□□□□ -1.85
VPS13C-203ENST00000395896 ILKAPQ9H0C8 392 aaPredicted RBP3.47□□□□□ -1.85
VPS13C-203ENST00000395896 SSU72Q9NP77 194 aaKnown RBP3.47□□□□□ -1.85
VPS13C-203ENST00000395896 TAS2R13Q9NYV9 303 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 APPL1Q9UKG1 709 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 DOCK8Q8NF50 2099 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 C2CD4BA6NLJ0 364 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 ZNF263O14978 683 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 GYG2O15488 501 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 DDHD2O94830 711 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 HSPA4LO95757 839 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 HOXD8P13378 290 aaPredicted RBP3.47□□□□□ -1.85
VPS13C-203ENST00000395896 DNAJB1P25685 340 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 PLOD1Q02809 727 aaPredicted RBP3.47□□□□□ -1.85
VPS13C-203ENST00000395896 CPB2Q96IY4 423 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 CPXM1Q96SM3 734 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 DRC3Q9H069 523 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 HIPK3Q9H422 1215 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 HBS1LQ9Y450 684 aaKnown RBP3.47□□□□□ -1.85
VPS13C-203ENST00000395896 FGF1P05230 155 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 SLC10A3P09131 477 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 CCDC130P13994 396 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 WARSP23381 471 aaKnown RBP3.47□□□□□ -1.85
VPS13C-203ENST00000395896 SLCO1A2P46721 670 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 RAD23BP54727 409 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 KCNA10Q16322 511 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 KCNT1Q5JUK3 1230 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 MFSD7Q6UXD7 560 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 MAGEB18Q96M61 343 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 TCF12Q99081 682 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 C1QTNF7Q9BXJ2 289 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 ZNF212Q9UDV6 495 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.47□□□□□ -1.85
VPS13C-203ENST00000395896 RIPK2O43353 540 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 CCR3P51677 355 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 CDH8P55286 799 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 CRY1Q16526 586 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.47□□□□□ -1.85
VPS13C-203ENST00000395896 UBA3Q8TBC4 463 aa3.47□□□□□ -1.85
VPS13C-203ENST00000395896 RIN2Q8WYP3 895 aaPredicted RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms