RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 CXADRP78310 365 aa6.03□□□□□ -1.44
AP3S1-202ENST00000395548 FAM193AP78312 1265 aa6.03□□□□□ -1.44
AP3S1-202ENST00000395548 FAM189BP81408 668 aa6.03□□□□□ -1.44
AP3S1-202ENST00000395548 SLC6A3Q01959 620 aa6.03□□□□□ -1.44
AP3S1-202ENST00000395548 FOXL1Q12952 345 aa6.03□□□□□ -1.44
AP3S1-202ENST00000395548 FOXE3Q13461 319 aa6.03□□□□□ -1.44
AP3S1-202ENST00000395548 GRM7Q14831 915 aa6.03□□□□□ -1.44
AP3S1-202ENST00000395548 MAPK6Q16659 721 aa6.03□□□□□ -1.44
AP3S1-202ENST00000395548 PREPLQ4J6C6 727 aaPredicted RBP6.03□□□□□ -1.44
AP3S1-202ENST00000395548 TOGARAM2Q6ZUX3 1019 aa6.03□□□□□ -1.44
AP3S1-202ENST00000395548 ADGRE4PQ86SQ3 457 aa6.03□□□□□ -1.44
AP3S1-202ENST00000395548 PPM1KQ8N3J5 372 aa6.03□□□□□ -1.44
AP3S1-202ENST00000395548 SDR42E1Q8WUS8 393 aa6.03□□□□□ -1.44
AP3S1-202ENST00000395548 JPH3Q8WXH2 748 aaPredicted RBP6.03□□□□□ -1.44
AP3S1-202ENST00000395548 FGF13Q92913 245 aa6.03□□□□□ -1.44
AP3S1-202ENST00000395548 INO80BQ9C086 356 aaPredicted RBP6.03□□□□□ -1.44
AP3S1-202ENST00000395548 SEMA4CQ9C0C4 833 aa6.03□□□□□ -1.44
AP3S1-202ENST00000395548 SCAND2PQ9GZW5 306 aaPredicted RBP6.03□□□□□ -1.44
AP3S1-202ENST00000395548 PUS7LQ9H0K6 701 aaKnown RBP6.03□□□□□ -1.44
AP3S1-202ENST00000395548 TRPV5Q9NQA5 729 aa6.03□□□□□ -1.44
AP3S1-202ENST00000395548 OBP2AQ9NY56 170 aa6.03□□□□□ -1.44
AP3S1-202ENST00000395548 TUBE1Q9UJT0 475 aa6.03□□□□□ -1.44
AP3S1-202ENST00000395548 ASCC3Q8N3C0 2202 aaKnown RBP6.03□□□□□ -1.44
AP3S1-202ENST00000395548 LCTP09848 1927 aa6.03□□□□□ -1.44
AP3S1-202ENST00000395548 PCNX1Q96RV3 2341 aa6.03□□□□□ -1.44
AP3S1-202ENST00000395548 USP9YO00507 2555 aaPredicted RBP6.03□□□□□ -1.44
AP3S1-202ENST00000395548 UBA6A0AVT1 1052 aaPredicted RBP6.02□□□□□ -1.45
AP3S1-202ENST00000395548 VSTM5A8MXK1 200 aa6.02□□□□□ -1.45
AP3S1-202ENST00000395548 NT5C1B-RDH14C9J2C7 533 aa6.02□□□□□ -1.45
AP3S1-202ENST00000395548 GPR39O43194 453 aa6.02□□□□□ -1.45
AP3S1-202ENST00000395548 BRINP1O60477 761 aa6.02□□□□□ -1.45
AP3S1-202ENST00000395548 DNAJC8O75937 253 aaPredicted RBP6.02□□□□□ -1.45
AP3S1-202ENST00000395548 PRLP01236 227 aa6.02□□□□□ -1.45
AP3S1-202ENST00000395548 UBTFL1P0CB47 393 aaPredicted RBP6.02□□□□□ -1.45
AP3S1-202ENST00000395548 HLA-EP13747 358 aa6.02□□□□□ -1.45
AP3S1-202ENST00000395548 MSX2P35548 267 aaPredicted RBP6.02□□□□□ -1.45
AP3S1-202ENST00000395548 DPP6P42658 865 aa6.02□□□□□ -1.45
AP3S1-202ENST00000395548 SNAP25P60880 206 aa6.02□□□□□ -1.45
AP3S1-202ENST00000395548 RNASELQ05823 741 aaKnown RBP6.02□□□□□ -1.45
AP3S1-202ENST00000395548 TTC38Q5R3I4 469 aa6.02□□□□□ -1.45
AP3S1-202ENST00000395548 PIK3R6Q5UE93 754 aa6.02□□□□□ -1.45
AP3S1-202ENST00000395548 SLFN12LQ6IEE8 588 aa6.02□□□□□ -1.45
AP3S1-202ENST00000395548 CXorf57Q6NSI4 855 aaKnown RBP6.02□□□□□ -1.45
AP3S1-202ENST00000395548 ZNF280BQ86YH2 543 aa6.02□□□□□ -1.45
AP3S1-202ENST00000395548 GPR135Q8IZ08 494 aa6.02□□□□□ -1.45
AP3S1-202ENST00000395548 CAMKK1Q8N5S9 505 aa6.02□□□□□ -1.45
AP3S1-202ENST00000395548 PNPLA1Q8N8W4 532 aa6.02□□□□□ -1.45
AP3S1-202ENST00000395548 EXTL1Q92935 676 aa6.02□□□□□ -1.45
AP3S1-202ENST00000395548 IGSF21Q96ID5 467 aa6.02□□□□□ -1.45
AP3S1-202ENST00000395548 RANBP17Q9H2T7 1088 aaKnown RBP6.02□□□□□ -1.45
AP3S1-202ENST00000395548 ZNF287Q9HBT7 754 aa6.02□□□□□ -1.45
AP3S1-202ENST00000395548 MTMR4Q9NYA4 1195 aa6.02□□□□□ -1.45
AP3S1-202ENST00000395548 SLC8A2Q9UPR5 921 aa6.02□□□□□ -1.45
AP3S1-202ENST00000395548 PIAS3Q9Y6X2 628 aa6.02□□□□□ -1.45
AP3S1-202ENST00000395548 F5P12259 2224 aa6.02□□□□□ -1.45
AP3S1-202ENST00000395548 COL5A1P20908 1838 aaPredicted RBP6.02□□□□□ -1.45
AP3S1-202ENST00000395548 LAMA4Q16363 1823 aa6.02□□□□□ -1.45
AP3S1-202ENST00000395548 DNHD1Q96M86 4753 aa6.01□□□□□ -1.45
AP3S1-202ENST00000395548 DVL2O14641 736 aa6.01□□□□□ -1.45
AP3S1-202ENST00000395548 ATG13O75143 517 aa6.01□□□□□ -1.45
AP3S1-202ENST00000395548 RPS6KA5O75582 802 aa6.01□□□□□ -1.45
AP3S1-202ENST00000395548 CT47B1P0C2W7 299 aaPredicted RBP6.01□□□□□ -1.45
AP3S1-202ENST00000395548 MYF5P13349 255 aa6.01□□□□□ -1.45
AP3S1-202ENST00000395548 ENGP17813 658 aa6.01□□□□□ -1.45
AP3S1-202ENST00000395548 MCCP23508 829 aa6.01□□□□□ -1.45
AP3S1-202ENST00000395548 ACRV1P26436 265 aa6.01□□□□□ -1.45
AP3S1-202ENST00000395548 HTR3AP46098 478 aa6.01□□□□□ -1.45
AP3S1-202ENST00000395548 HMGA2P52926 109 aa6.01□□□□□ -1.45
AP3S1-202ENST00000395548 UCNP55089 124 aa6.01□□□□□ -1.45
AP3S1-202ENST00000395548 PPFIA1Q13136 1202 aa6.01□□□□□ -1.45
AP3S1-202ENST00000395548 SLC14A1Q13336 389 aa6.01□□□□□ -1.45
AP3S1-202ENST00000395548 ALFQ53S48 1182 aa6.01□□□□□ -1.45
AP3S1-202ENST00000395548 MIIPQ5JXC2 388 aa6.01□□□□□ -1.45
AP3S1-202ENST00000395548 ERAP2Q6P179 960 aa6.01□□□□□ -1.45
AP3S1-202ENST00000395548 SGMS1Q86VZ5 419 aa6.01□□□□□ -1.45
AP3S1-202ENST00000395548 BCL6BQ8N143 479 aaPredicted RBP6.01□□□□□ -1.45
AP3S1-202ENST00000395548 D2HGDHQ8N465 521 aa6.01□□□□□ -1.45
AP3S1-202ENST00000395548 ZNF808Q8N4W9 903 aaPredicted RBP6.01□□□□□ -1.45
AP3S1-202ENST00000395548 KIAA1958Q8N8K9 716 aa6.01□□□□□ -1.45
AP3S1-202ENST00000395548 ANKRD42Q8N9B4 389 aa6.01□□□□□ -1.45
AP3S1-202ENST00000395548 RABGGTAQ92696 567 aa6.01□□□□□ -1.45
AP3S1-202ENST00000395548 GCDHQ92947 438 aaPredicted RBP6.01□□□□□ -1.45
AP3S1-202ENST00000395548 ELSPBP1Q96BH3 223 aa6.01□□□□□ -1.45
AP3S1-202ENST00000395548 ZNF503Q96F45 646 aa6.01□□□□□ -1.45
AP3S1-202ENST00000395548 RMDN3Q96TC7 470 aa6.01□□□□□ -1.45
AP3S1-202ENST00000395548 TRMT61BQ9BVS5 477 aaKnown RBP6.01□□□□□ -1.45
AP3S1-202ENST00000395548 SARGQ9BW04 601 aa6.01□□□□□ -1.45
AP3S1-202ENST00000395548 APOL6Q9BWW8 343 aa6.01□□□□□ -1.45
AP3S1-202ENST00000395548 SLC6A15Q9H2J7 730 aa6.01□□□□□ -1.45
AP3S1-202ENST00000395548 AURKAIP1Q9NWT8 199 aaPredicted RBP6.01□□□□□ -1.45
AP3S1-202ENST00000395548 KCMF1Q9P0J7 381 aa6.01□□□□□ -1.45
AP3S1-202ENST00000395548 B4GALT6Q9UBX8 382 aa6.01□□□□□ -1.45
AP3S1-202ENST00000395548 ZNF69Q9UC07 566 aa6.01□□□□□ -1.45
AP3S1-202ENST00000395548 MAN2B2Q9Y2E5 1009 aa6.01□□□□□ -1.45
AP3S1-202ENST00000395548 HS3ST3A1Q9Y663 406 aa6.01□□□□□ -1.45
AP3S1-202ENST00000395548 UTP20O75691 2785 aaKnown RBP6.01□□□□□ -1.45
AP3S1-202ENST00000395548 KDM3AQ9Y4C1 1321 aa6□□□□□ -1.45
AP3S1-202ENST00000395548 ABCA2Q9BZC7 2435 aa6□□□□□ -1.45
AP3S1-202ENST00000395548 PLXNB3Q9ULL4 1909 aa6□□□□□ -1.45
AP3S1-202ENST00000395548 IGKV6D-41A0A0C4DH26 115 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms