RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 CSPG4P5Q96PW8 444 aa19.94■□□□□ 0.78
LMNB1-202ENST00000395354 ADAM7Q9H2U9 754 aa19.94■□□□□ 0.78
LMNB1-202ENST00000395354 DZANK1Q9NVP4 752 aa19.94■□□□□ 0.78
LMNB1-202ENST00000395354 ZDHHC7Q9NXF8 308 aa19.94■□□□□ 0.78
LMNB1-202ENST00000395354 CCDC195A0A1B0GUA6 201 aa19.93■□□□□ 0.78
LMNB1-202ENST00000395354 BCLAF3A2AJT9 711 aaKnown RBP19.93■□□□□ 0.78
LMNB1-202ENST00000395354 H3BRJ5 948 aa19.93■□□□□ 0.78
LMNB1-202ENST00000395354 CCL16O15467 120 aa19.93■□□□□ 0.78
LMNB1-202ENST00000395354 HOXA9P31269 272 aa19.93■□□□□ 0.78
LMNB1-202ENST00000395354 SLC5A3P53794 718 aa19.93■□□□□ 0.78
LMNB1-202ENST00000395354 PITX1P78337 314 aaPredicted RBP19.93■□□□□ 0.78
LMNB1-202ENST00000395354 BSPRYQ5W0U4 402 aa19.93■□□□□ 0.78
LMNB1-202ENST00000395354 DARS2Q6PI48 645 aaKnown RBP19.93■□□□□ 0.78
LMNB1-202ENST00000395354 BZW1Q7L1Q6 419 aaKnown RBP19.93■□□□□ 0.78
LMNB1-202ENST00000395354 ITIH5Q86UX2 942 aa19.93■□□□□ 0.78
LMNB1-202ENST00000395354 ELMOD1Q8N336 334 aa19.93■□□□□ 0.78
LMNB1-202ENST00000395354 C12orf76Q8N812 135 aaPredicted RBP19.93■□□□□ 0.78
LMNB1-202ENST00000395354 GLIS1Q8NBF1 620 aa19.93■□□□□ 0.78
LMNB1-202ENST00000395354 RTP4Q96DX8 246 aa19.93■□□□□ 0.78
LMNB1-202ENST00000395354 EPB41L4BQ9H329 900 aa19.93■□□□□ 0.78
LMNB1-202ENST00000395354 WDR6Q9NNW5 1121 aaKnown RBP19.93■□□□□ 0.78
LMNB1-202ENST00000395354 PIGVQ9NUD9 493 aa19.93■□□□□ 0.78
LMNB1-202ENST00000395354 CWC15Q9P013 229 aaKnown RBP19.93■□□□□ 0.78
LMNB1-202ENST00000395354 SHOC2Q9UQ13 582 aa19.93■□□□□ 0.78
LMNB1-202ENST00000395354 ASB3Q9Y575 518 aa19.93■□□□□ 0.78
LMNB1-202ENST00000395354 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.92■□□□□ 0.78
LMNB1-202ENST00000395354 RTN3O95197 1032 aaPredicted RBP19.92■□□□□ 0.78
LMNB1-202ENST00000395354 IFNB1P01574 187 aa19.92■□□□□ 0.78
LMNB1-202ENST00000395354 ZSCAN5DPP0CG00 497 aa19.92■□□□□ 0.78
LMNB1-202ENST00000395354 CSH1P0DML2 217 aa19.92■□□□□ 0.78
LMNB1-202ENST00000395354 CSH2P0DML3 217 aa19.92■□□□□ 0.78
LMNB1-202ENST00000395354 ADRA1BP35368 520 aa19.92■□□□□ 0.78
LMNB1-202ENST00000395354 USP46P62068 366 aa19.92■□□□□ 0.78
LMNB1-202ENST00000395354 ZNF844Q08AG5 666 aa19.92■□□□□ 0.78
LMNB1-202ENST00000395354 IFRD2Q12894 506 aaPredicted RBP19.92■□□□□ 0.78
LMNB1-202ENST00000395354 NME3Q13232 169 aa19.92■□□□□ 0.78
LMNB1-202ENST00000395354 CCDC85BQ15834 202 aaPredicted RBP19.92■□□□□ 0.78
LMNB1-202ENST00000395354 CTC1Q2NKJ3 1217 aa19.92■□□□□ 0.78
LMNB1-202ENST00000395354 ARL13BQ3SXY8 428 aa19.92■□□□□ 0.78
LMNB1-202ENST00000395354 CEP85LQ5SZL2 805 aa19.92■□□□□ 0.78
LMNB1-202ENST00000395354 RNASEH2BQ5TBB1 312 aaKnown RBP19.92■□□□□ 0.78
LMNB1-202ENST00000395354 C1orf228Q6PIY5 440 aa19.92■□□□□ 0.78
LMNB1-202ENST00000395354 NPNTQ6UXI9 565 aa19.92■□□□□ 0.78
LMNB1-202ENST00000395354 EP400NLQ6ZTU2 488 aa19.92■□□□□ 0.78
LMNB1-202ENST00000395354 PSMG2Q969U7 264 aa19.92■□□□□ 0.78
LMNB1-202ENST00000395354 PRKD2Q9BZL6 878 aa19.92■□□□□ 0.78
LMNB1-202ENST00000395354 PHACTR1Q9C0D0 580 aa19.92■□□□□ 0.78
LMNB1-202ENST00000395354 TMBIM4Q9HC24 238 aa19.92■□□□□ 0.78
LMNB1-202ENST00000395354 ABCC13Q9NSE7 274 aa19.92■□□□□ 0.78
LMNB1-202ENST00000395354 CLDND1Q9NY35 253 aa19.92■□□□□ 0.78
LMNB1-202ENST00000395354 MAGED2Q9UNF1 606 aaPredicted RBP19.92■□□□□ 0.78
LMNB1-202ENST00000395354 H7C0C1 242 aa19.91■□□□□ 0.78
LMNB1-202ENST00000395354 XYLBO75191 536 aa19.91■□□□□ 0.78
LMNB1-202ENST00000395354 MYZAPP0CAP1 466 aa19.91■□□□□ 0.78
LMNB1-202ENST00000395354 HMGA1P17096 107 aaKnown RBP19.91■□□□□ 0.78
LMNB1-202ENST00000395354 YWHAQP27348 245 aa19.91■□□□□ 0.78
LMNB1-202ENST00000395354 ATP5OP48047 213 aa19.91■□□□□ 0.78
LMNB1-202ENST00000395354 HCAR3P49019 387 aa19.91■□□□□ 0.78
LMNB1-202ENST00000395354 CXCR3P49682 368 aa19.91■□□□□ 0.78
LMNB1-202ENST00000395354 ANKRD54Q6NXT1 300 aa19.91■□□□□ 0.78
LMNB1-202ENST00000395354 C4orf22Q6V702 233 aa19.91■□□□□ 0.78
LMNB1-202ENST00000395354 HOOK3Q86VS8 718 aa19.91■□□□□ 0.78
LMNB1-202ENST00000395354 CDKL3Q8IVW4 592 aaPredicted RBP19.91■□□□□ 0.78
LMNB1-202ENST00000395354 UNC45BQ8IWX7 931 aa19.91■□□□□ 0.78
LMNB1-202ENST00000395354 TMEM109Q9BVC6 243 aa19.91■□□□□ 0.78
LMNB1-202ENST00000395354 SEMA4AQ9H3S1 761 aa19.91■□□□□ 0.78
LMNB1-202ENST00000395354 FBXO44Q9H4M3 255 aa19.91■□□□□ 0.78
LMNB1-202ENST00000395354 SFXN1Q9H9B4 322 aa19.91■□□□□ 0.78
LMNB1-202ENST00000395354 COMMD8Q9NX08 183 aa19.91■□□□□ 0.78
LMNB1-202ENST00000395354 DDIT4Q9NX09 232 aa19.91■□□□□ 0.78
LMNB1-202ENST00000395354 IL37Q9NZH6 218 aa19.91■□□□□ 0.78
LMNB1-202ENST00000395354 BRWD1Q9NSI6 2320 aa19.91■□□□□ 0.78
LMNB1-202ENST00000395354 GOLGA6CA6NDK9 693 aa19.91■□□□□ 0.78
LMNB1-202ENST00000395354 HMGB1P1B2RPK0 211 aaPredicted RBP19.91■□□□□ 0.78
LMNB1-202ENST00000395354 RIPK2O43353 540 aa19.91■□□□□ 0.78
LMNB1-202ENST00000395354 ZNF189O75820 626 aaPredicted RBP19.91■□□□□ 0.78
LMNB1-202ENST00000395354 GOLGA6DP0CG33 693 aa19.91■□□□□ 0.78
LMNB1-202ENST00000395354 ETS1P14921 441 aa19.91■□□□□ 0.78
LMNB1-202ENST00000395354 RPL22P35268 128 aaKnown RBP19.91■□□□□ 0.78
LMNB1-202ENST00000395354 CHKAP35790 457 aa19.91■□□□□ 0.78
LMNB1-202ENST00000395354 GDF10P55107 478 aa19.91■□□□□ 0.78
LMNB1-202ENST00000395354 YWHAGP61981 247 aaKnown RBP eCLIP19.91■□□□□ 0.78
LMNB1-202ENST00000395354 COL19A1Q14993 1142 aa19.91■□□□□ 0.78
LMNB1-202ENST00000395354 TMC5Q6UXY8 1006 aa19.91■□□□□ 0.78
LMNB1-202ENST00000395354 PRUNE1Q86TP1 453 aa19.91■□□□□ 0.78
LMNB1-202ENST00000395354 PPIL6Q8IXY8 311 aa19.91■□□□□ 0.78
LMNB1-202ENST00000395354 RNF139Q8WU17 664 aa19.91■□□□□ 0.78
LMNB1-202ENST00000395354 ARL8AQ96BM9 186 aa19.91■□□□□ 0.78
LMNB1-202ENST00000395354 ZNF707Q96C28 371 aaPredicted RBP19.91■□□□□ 0.78
LMNB1-202ENST00000395354 PABPC5Q96DU9 382 aaKnown RBP19.91■□□□□ 0.78
LMNB1-202ENST00000395354 MYRFLQ96LU7 910 aa19.91■□□□□ 0.78
LMNB1-202ENST00000395354 FAM204AQ9H8W3 233 aa19.91■□□□□ 0.78
LMNB1-202ENST00000395354 USP29Q9HBJ7 922 aa19.91■□□□□ 0.78
LMNB1-202ENST00000395354 GOLGA6AQ9NYA3 693 aa19.91■□□□□ 0.78
LMNB1-202ENST00000395354 CLEC1BQ9P126 229 aa19.91■□□□□ 0.78
LMNB1-202ENST00000395354 HACD1B0YJ81 288 aa19.9■□□□□ 0.78
LMNB1-202ENST00000395354 IGLV3-25P01717 112 aa19.9■□□□□ 0.78
LMNB1-202ENST00000395354 HOXB8P17481 243 aaPredicted RBP19.9■□□□□ 0.78
LMNB1-202ENST00000395354 PTPN2P17706 415 aa19.9■□□□□ 0.78
LMNB1-202ENST00000395354 DLX2Q07687 328 aaPredicted RBP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms