RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 EEF2KO00418 725 aaKnown RBP14.38□□□□□ -0.11
SNCA-204ENST00000394989 TRDMT1O14717 391 aaKnown RBP14.38□□□□□ -0.11
SNCA-204ENST00000394989 LPXNO60711 386 aa14.38□□□□□ -0.11
SNCA-204ENST00000394989 DHRS4L1P0CG22 281 aa14.38□□□□□ -0.11
SNCA-204ENST00000394989 NCAM1P13591 858 aa14.38□□□□□ -0.11
SNCA-204ENST00000394989 PRKCZQ05513 592 aa14.38□□□□□ -0.11
SNCA-204ENST00000394989 KCNA10Q16322 511 aa14.38□□□□□ -0.11
SNCA-204ENST00000394989 OXNAD1Q96HP4 312 aaPredicted RBP14.38□□□□□ -0.11
SNCA-204ENST00000394989 APOPT1Q96IL0 206 aa14.38□□□□□ -0.11
SNCA-204ENST00000394989 SLC9A7Q96T83 725 aa14.38□□□□□ -0.11
SNCA-204ENST00000394989 PIH1D1Q9NWS0 290 aaKnown RBP14.38□□□□□ -0.11
SNCA-204ENST00000394989 ZNF180Q9UJW8 692 aa14.38□□□□□ -0.11
SNCA-204ENST00000394989 TDRD15B5MCY1 1934 aaKnown RBP14.38□□□□□ -0.11
SNCA-204ENST00000394989 CAPN9O14815 690 aa14.37□□□□□ -0.11
SNCA-204ENST00000394989 CA12O43570 354 aa14.37□□□□□ -0.11
SNCA-204ENST00000394989 CCND3P30281 292 aaPredicted RBP14.37□□□□□ -0.11
SNCA-204ENST00000394989 RPL9P32969 192 aaKnown RBP14.37□□□□□ -0.11
SNCA-204ENST00000394989 BRCC3P46736 316 aa14.37□□□□□ -0.11
SNCA-204ENST00000394989 NCALDP61601 193 aa14.37□□□□□ -0.11
SNCA-204ENST00000394989 CRADDP78560 199 aa14.37□□□□□ -0.11
SNCA-204ENST00000394989 SCAPQ12770 1279 aa14.37□□□□□ -0.11
SNCA-204ENST00000394989 CCSAPQ6IQ19 270 aaPredicted RBP14.37□□□□□ -0.11
SNCA-204ENST00000394989 UNC5BQ8IZJ1 945 aa14.37□□□□□ -0.11
SNCA-204ENST00000394989 PDCD7Q8N8D1 485 aaKnown RBP14.37□□□□□ -0.11
SNCA-204ENST00000394989 HASPINQ8TF76 798 aa14.37□□□□□ -0.11
SNCA-204ENST00000394989 MYLPFQ96A32 169 aa14.37□□□□□ -0.11
SNCA-204ENST00000394989 ALG13Q9NP73 1137 aaKnown RBP14.37□□□□□ -0.11
SNCA-204ENST00000394989 XPNPEP3Q9NQH7 507 aa14.37□□□□□ -0.11
SNCA-204ENST00000394989 TMLHEQ9NVH6 421 aa14.37□□□□□ -0.11
SNCA-204ENST00000394989 FBXW11Q9UKB1 542 aa14.37□□□□□ -0.11
SNCA-204ENST00000394989 PTCH2Q9Y6C5 1203 aa14.37□□□□□ -0.11
SNCA-204ENST00000394989 TRIM49D1C9J1S8 452 aa14.37□□□□□ -0.11
SNCA-204ENST00000394989 F8W810 466 aa14.37□□□□□ -0.11
SNCA-204ENST00000394989 ZNF623O75123 536 aa14.37□□□□□ -0.11
SNCA-204ENST00000394989 DSC3Q14574 896 aa14.37□□□□□ -0.11
SNCA-204ENST00000394989 LPIN1Q14693 890 aa14.37□□□□□ -0.11
SNCA-204ENST00000394989 TTC39BQ5VTQ0 682 aaPredicted RBP14.37□□□□□ -0.11
SNCA-204ENST00000394989 BZW1Q7L1Q6 419 aaKnown RBP14.37□□□□□ -0.11
SNCA-204ENST00000394989 GSDMBQ8TAX9 411 aa14.37□□□□□ -0.11
SNCA-204ENST00000394989 EDEM1Q92611 657 aa14.37□□□□□ -0.11
SNCA-204ENST00000394989 NTAN1Q96AB6 310 aa14.37□□□□□ -0.11
SNCA-204ENST00000394989 SMARCD1Q96GM5 515 aa14.37□□□□□ -0.11
SNCA-204ENST00000394989 XAB2Q9HCS7 855 aaKnown RBP14.37□□□□□ -0.11
SNCA-204ENST00000394989 TRIM33Q9UPN9 1127 aa14.37□□□□□ -0.11
SNCA-204ENST00000394989 FAM159BA6NKW6 160 aa14.36□□□□□ -0.11
SNCA-204ENST00000394989 RFPL1O75677 317 aa14.36□□□□□ -0.11
SNCA-204ENST00000394989 B3GAT3O94766 335 aa14.36□□□□□ -0.11
SNCA-204ENST00000394989 LTFP02788 710 aa14.36□□□□□ -0.11
SNCA-204ENST00000394989 ITGB1P05556 798 aa14.36□□□□□ -0.11
SNCA-204ENST00000394989 TM4SF4P48230 202 aa14.36□□□□□ -0.11
SNCA-204ENST00000394989 FCGRTP55899 365 aa14.36□□□□□ -0.11
SNCA-204ENST00000394989 SREBF2Q12772 1141 aa14.36□□□□□ -0.11
SNCA-204ENST00000394989 PLEKHG4Q58EX7 1191 aa14.36□□□□□ -0.11
SNCA-204ENST00000394989 ARMC3Q5W041 872 aa14.36□□□□□ -0.11
SNCA-204ENST00000394989 FAM171BQ6P995 826 aa14.36□□□□□ -0.11
SNCA-204ENST00000394989 ZNF567Q8N184 647 aa14.36□□□□□ -0.11
SNCA-204ENST00000394989 NPWQ8N729 165 aa14.36□□□□□ -0.11
SNCA-204ENST00000394989 PGAP3Q96FM1 320 aaPredicted RBP14.36□□□□□ -0.11
SNCA-204ENST00000394989 FAM111AQ96PZ2 611 aa14.36□□□□□ -0.11
SNCA-204ENST00000394989 TMEM209Q96SK2 561 aa14.36□□□□□ -0.11
SNCA-204ENST00000394989 PKMYT1Q99640 499 aa14.36□□□□□ -0.11
SNCA-204ENST00000394989 GORASP1Q9BQQ3 440 aa14.36□□□□□ -0.11
SNCA-204ENST00000394989 VPS11Q9H270 941 aa14.36□□□□□ -0.11
SNCA-204ENST00000394989 PRDM16Q9HAZ2 1276 aa14.36□□□□□ -0.11
SNCA-204ENST00000394989 SPC25Q9HBM1 224 aa14.36□□□□□ -0.11
SNCA-204ENST00000394989 MOCS1Q9NZB8 636 aa14.36□□□□□ -0.11
SNCA-204ENST00000394989 PCDHA11Q9Y5I1 949 aa14.36□□□□□ -0.11
SNCA-204ENST00000394989 A0A0U1RQF3 1178 aa14.36□□□□□ -0.11
SNCA-204ENST00000394989 ERCC2P18074 760 aa14.36□□□□□ -0.11
SNCA-204ENST00000394989 PSMB4P28070 264 aa14.36□□□□□ -0.11
SNCA-204ENST00000394989 BMPR2Q13873 1038 aa14.36□□□□□ -0.11
SNCA-204ENST00000394989 CCNYQ8ND76 341 aa14.36□□□□□ -0.11
SNCA-204ENST00000394989 C10orf82Q8WW14 230 aa14.36□□□□□ -0.11
SNCA-204ENST00000394989 ARNTL2Q8WYA1 636 aa14.36□□□□□ -0.11
SNCA-204ENST00000394989 WDR27A2RRH5 827 aa14.36□□□□□ -0.11
SNCA-204ENST00000394989 OPHN1O60890 802 aa14.36□□□□□ -0.11
SNCA-204ENST00000394989 GSTA2P09210 222 aa14.36□□□□□ -0.11
SNCA-204ENST00000394989 ALADP13716 330 aa14.36□□□□□ -0.11
SNCA-204ENST00000394989 FDFT1P37268 417 aa14.36□□□□□ -0.11
SNCA-204ENST00000394989 TLDC1Q6P9B6 456 aa14.36□□□□□ -0.11
SNCA-204ENST00000394989 LRRTM3Q86VH5 581 aa14.36□□□□□ -0.11
SNCA-204ENST00000394989 GBP7Q8N8V2 638 aaPredicted RBP14.36□□□□□ -0.11
SNCA-204ENST00000394989 KLHDC9Q8NEP7 349 aa14.36□□□□□ -0.11
SNCA-204ENST00000394989 OR10T2Q8NGX3 314 aa14.36□□□□□ -0.11
SNCA-204ENST00000394989 COLEC11Q9BWP8 271 aa14.36□□□□□ -0.11
SNCA-204ENST00000394989 ECT2Q9H8V3 914 aa14.36□□□□□ -0.11
SNCA-204ENST00000394989 TRMT13Q9NUP7 481 aaKnown RBP14.36□□□□□ -0.11
SNCA-204ENST00000394989 DDIT4Q9NX09 232 aa14.36□□□□□ -0.11
SNCA-204ENST00000394989 SEPT10Q9P0V9 454 aa14.36□□□□□ -0.11
SNCA-204ENST00000394989 CHKBQ9Y259 395 aa14.36□□□□□ -0.11
SNCA-204ENST00000394989 TLL2Q9Y6L7 1015 aa14.36□□□□□ -0.11
SNCA-204ENST00000394989 NLRC5Q86WI3 1866 aa14.36□□□□□ -0.11
SNCA-204ENST00000394989 KCNK1O00180 336 aa14.35□□□□□ -0.11
SNCA-204ENST00000394989 BDNFP23560 247 aa14.35□□□□□ -0.11
SNCA-204ENST00000394989 PCSK1P29120 753 aa14.35□□□□□ -0.11
SNCA-204ENST00000394989 PDK1Q15118 436 aa14.35□□□□□ -0.11
SNCA-204ENST00000394989 ARMC2Q8NEN0 867 aa14.35□□□□□ -0.11
SNCA-204ENST00000394989 ADAM2Q99965 735 aa14.35□□□□□ -0.11
SNCA-204ENST00000394989 SLC17A6Q9P2U8 582 aa14.35□□□□□ -0.11
SNCA-204ENST00000394989 SNX10Q9Y5X0 201 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms