RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 SPATA16Q9BXB7 569 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 MRPL1Q9BYD6 325 aaKnown RBP9.34□□□□□ -0.91
CDH11-202ENST00000394156 NOP53Q9NZM5 478 aaKnown RBP9.34□□□□□ -0.91
CDH11-202ENST00000394156 KDM3BQ7LBC6 1761 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 PDE5AO76074 875 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 PTENP60484 403 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 GTF2BQ00403 316 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 ATAD1Q8NBU5 361 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 CAMKK2Q96RR4 588 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 FFAR2O15552 330 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 RAMP2O60895 175 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 LMNAP02545 664 aaKnown RBP9.33□□□□□ -0.92
CDH11-202ENST00000394156 EIF4BP23588 611 aaKnown RBP9.33□□□□□ -0.92
CDH11-202ENST00000394156 SEC13P55735 322 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 NR1H3Q13133 447 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 OTOP3Q7RTS5 596 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 PIGZQ86VD9 579 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 LRRC6Q86X45 466 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 PHACTR4Q8IZ21 702 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 TEKT4Q8WW24 435 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 SOCS4Q8WXH5 440 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 TRIM62Q9BVG3 475 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 TRIM15Q9C019 465 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 TXNRD2Q9NNW7 524 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 ZNF112Q9UJU3 913 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 BAIAP3O94812 1187 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 SLC1A6P48664 564 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 CLK2P49760 499 aaKnown RBP9.33□□□□□ -0.92
CDH11-202ENST00000394156 SLC16A1P53985 500 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 CTBP1Q13363 440 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 ITGA7Q13683 1181 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 FASTKD3Q14CZ7 662 aaKnown RBP9.33□□□□□ -0.92
CDH11-202ENST00000394156 IRF2BP2Q7Z5L9 587 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 RPAINQ86UA6 219 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 IRF2BP1Q8IU81 584 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 TBL1YQ9BQ87 522 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 DMAP1Q9NPF5 467 aaPredicted RBP9.33□□□□□ -0.92
CDH11-202ENST00000394156 SLC17A6Q9P2U8 582 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 GRID1Q9ULK0 1009 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 COG5Q9UP83 839 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 ATRNO75882 1429 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 TRBV23OR9-2A0A075B6M9 112 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 ACADMP11310 421 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 HNF4AP41235 474 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 ALDH6A1Q02252 535 aaKnown RBP9.33□□□□□ -0.92
CDH11-202ENST00000394156 ZNF618Q5T7W0 954 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 MARC1Q5VT66 337 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 PRSS55Q6UWB4 352 aaPredicted RBP9.33□□□□□ -0.92
CDH11-202ENST00000394156 CCDC81Q6ZN84 652 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 TMC3Q7Z5M5 1100 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 WWP1Q9H0M0 922 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 TSPYL2Q9H2G4 693 aaPredicted RBP9.33□□□□□ -0.92
CDH11-202ENST00000394156 SLC40A1Q9NP59 571 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 DUOX1Q9NRD9 1551 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 MYO1DO94832 1006 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 GLP2RO95838 553 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 HLA-DPA1P20036 260 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 HALP42357 657 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 DPYSL3Q14195 570 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 C9orf57Q5W0N0 161 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 HES6Q96HZ4 224 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 CPXM1Q96SM3 734 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 POMKQ9H5K3 350 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 MARCH2Q9P0N8 246 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 WHRNQ9P202 907 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 NCKAP1LP55160 1127 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 ZNF844Q08AG5 666 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 CRHR2Q13324 411 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 DMC1Q14565 340 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 SLC35G1Q2M3R5 365 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 LRIG3Q6UXM1 1119 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 VMP1Q96GC9 406 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 RHBGQ9H310 441 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 FAM105AQ9NUU6 356 aa9.33□□□□□ -0.92
CDH11-202ENST00000394156 A0A0B4J269 797 aa9.32□□□□□ -0.92
CDH11-202ENST00000394156 TMEM247A6NEH6 219 aa9.32□□□□□ -0.92
CDH11-202ENST00000394156 INPP4BO15327 924 aa9.32□□□□□ -0.92
CDH11-202ENST00000394156 NOL4O94818 638 aa9.32□□□□□ -0.92
CDH11-202ENST00000394156 UBOX5O94941 541 aa9.32□□□□□ -0.92
CDH11-202ENST00000394156 GJA1P17302 382 aa9.32□□□□□ -0.92
CDH11-202ENST00000394156 NPR3P17342 541 aa9.32□□□□□ -0.92
CDH11-202ENST00000394156 NAPRTQ6XQN6 538 aa9.32□□□□□ -0.92
CDH11-202ENST00000394156 NAT14Q8WUY8 206 aa9.32□□□□□ -0.92
CDH11-202ENST00000394156 ZFYVE1Q9HBF4 777 aa9.32□□□□□ -0.92
CDH11-202ENST00000394156 MYH9P35579 1960 aaKnown RBP9.32□□□□□ -0.92
CDH11-202ENST00000394156 F8W8V4 182 aa9.32□□□□□ -0.92
CDH11-202ENST00000394156 CBX6O95503 412 aa9.32□□□□□ -0.92
CDH11-202ENST00000394156 SKIP12755 728 aa9.32□□□□□ -0.92
CDH11-202ENST00000394156 STMN1P16949 149 aa9.32□□□□□ -0.92
CDH11-202ENST00000394156 RCN1Q15293 331 aa9.32□□□□□ -0.92
CDH11-202ENST00000394156 CHADLQ6NUI6 762 aa9.32□□□□□ -0.92
CDH11-202ENST00000394156 GET4Q7L5D6 327 aaPredicted RBP9.32□□□□□ -0.92
CDH11-202ENST00000394156 SEMA6AQ9H2E6 1030 aa9.32□□□□□ -0.92
CDH11-202ENST00000394156 AAASQ9NRG9 546 aa9.32□□□□□ -0.92
CDH11-202ENST00000394156 PLA2G4CQ9UP65 541 aa9.32□□□□□ -0.92
CDH11-202ENST00000394156 UBR2Q8IWV8 1755 aa9.32□□□□□ -0.92
CDH11-202ENST00000394156 TLL1O43897 1013 aa9.32□□□□□ -0.92
CDH11-202ENST00000394156 ZNF862O60290 1169 aa9.32□□□□□ -0.92
CDH11-202ENST00000394156 PRKCGP05129 697 aa9.32□□□□□ -0.92
CDH11-202ENST00000394156 MUTP22033 750 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms