RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 COL19A1Q14993 1142 aa25.07■■□□□ 1.6
LRFN4-202ENST00000393952 SLC9A4Q6AI14 798 aa25.07■■□□□ 1.6
LRFN4-202ENST00000393952 CHSY1Q86X52 802 aa25.07■■□□□ 1.6
LRFN4-202ENST00000393952 PLD5Q8N7P1 536 aa25.07■■□□□ 1.6
LRFN4-202ENST00000393952 AZIN2Q96A70 460 aa25.07■■□□□ 1.6
LRFN4-202ENST00000393952 HAUS1Q96CS2 278 aa25.07■■□□□ 1.6
LRFN4-202ENST00000393952 PRMT1Q99873 361 aaKnown RBP25.07■■□□□ 1.6
LRFN4-202ENST00000393952 S1PR5Q9H228 398 aa25.07■■□□□ 1.6
LRFN4-202ENST00000393952 AGO1Q9UL18 857 aaKnown RBP25.07■■□□□ 1.6
LRFN4-202ENST00000393952 VANGL2Q9ULK5 521 aa25.07■■□□□ 1.6
LRFN4-202ENST00000393952 MFHAS1Q9Y4C4 1052 aa25.07■■□□□ 1.6
LRFN4-202ENST00000393952 GOLGA6L10A0A0M3HER8 536 aa25.06■■□□□ 1.6
LRFN4-202ENST00000393952 LEFTY2O00292 366 aa25.06■■□□□ 1.6
LRFN4-202ENST00000393952 APOL1O14791 398 aa25.06■■□□□ 1.6
LRFN4-202ENST00000393952 DAPK3O43293 454 aa25.06■■□□□ 1.6
LRFN4-202ENST00000393952 PRAMEF12O95522 483 aa25.06■■□□□ 1.6
LRFN4-202ENST00000393952 EPHB2P29323 1055 aa25.06■■□□□ 1.6
LRFN4-202ENST00000393952 FAM133BQ5BKY9 247 aaKnown RBP25.06■■□□□ 1.6
LRFN4-202ENST00000393952 RWDD4Q6NW29 188 aaKnown RBP25.06■■□□□ 1.6
LRFN4-202ENST00000393952 ZNF683Q8IZ20 524 aa25.06■■□□□ 1.6
LRFN4-202ENST00000393952 C1orf54Q8WWF1 131 aa25.06■■□□□ 1.6
LRFN4-202ENST00000393952 USP13Q92995 863 aaPredicted RBP25.06■■□□□ 1.6
LRFN4-202ENST00000393952 TBC1D31Q96DN5 1066 aa25.06■■□□□ 1.6
LRFN4-202ENST00000393952 FAM118BQ9BPY3 351 aa25.06■■□□□ 1.6
LRFN4-202ENST00000393952 DCLK3Q9C098 648 aa25.06■■□□□ 1.6
LRFN4-202ENST00000393952 SAE1Q9UBE0 346 aaPredicted RBP25.06■■□□□ 1.6
LRFN4-202ENST00000393952 ZMYM5Q9UJ78 669 aa25.06■■□□□ 1.6
LRFN4-202ENST00000393952 TACR2P21452 398 aa25.05■■□□□ 1.6
LRFN4-202ENST00000393952 HOXC13P31276 330 aa25.05■■□□□ 1.6
LRFN4-202ENST00000393952 ITIH3Q06033 890 aa25.05■■□□□ 1.6
LRFN4-202ENST00000393952 CES5AQ6NT32 575 aa25.05■■□□□ 1.6
LRFN4-202ENST00000393952 FBXL22Q6P050 247 aa25.05■■□□□ 1.6
LRFN4-202ENST00000393952 NPNTQ6UXI9 565 aa25.05■■□□□ 1.6
LRFN4-202ENST00000393952 SH3RF2Q8TEC5 729 aa25.05■■□□□ 1.6
LRFN4-202ENST00000393952 ATG4AQ8WYN0 398 aa25.05■■□□□ 1.6
LRFN4-202ENST00000393952 PABPC5Q96DU9 382 aaKnown RBP25.05■■□□□ 1.6
LRFN4-202ENST00000393952 RPGRIP1Q96KN7 1286 aa25.05■■□□□ 1.6
LRFN4-202ENST00000393952 TDP1Q9NUW8 608 aa25.05■■□□□ 1.6
LRFN4-202ENST00000393952 NUP210Q8TEM1 1887 aaPredicted RBP25.05■■□□□ 1.6
LRFN4-202ENST00000393952 BRWD1Q9NSI6 2320 aa25.05■■□□□ 1.6
LRFN4-202ENST00000393952 DCLK1O15075 740 aa25.05■■□□□ 1.6
LRFN4-202ENST00000393952 PECAM1P16284 738 aaPredicted RBP25.05■■□□□ 1.6
LRFN4-202ENST00000393952 ERCC2P18074 760 aa25.05■■□□□ 1.6
LRFN4-202ENST00000393952 SLC6A4P31645 630 aa25.05■■□□□ 1.6
LRFN4-202ENST00000393952 HTR7P34969 479 aa25.05■■□□□ 1.6
LRFN4-202ENST00000393952 NCBP2-AS2Q69YL0 99 aa25.05■■□□□ 1.6
LRFN4-202ENST00000393952 RFWD3Q6PCD5 774 aa25.05■■□□□ 1.6
LRFN4-202ENST00000393952 C1orf228Q6PIY5 440 aa25.05■■□□□ 1.6
LRFN4-202ENST00000393952 Q6ZNB5 142 aa25.05■■□□□ 1.6
LRFN4-202ENST00000393952 Q7L0L9 218 aa25.05■■□□□ 1.6
LRFN4-202ENST00000393952 GET4Q7L5D6 327 aaPredicted RBP25.05■■□□□ 1.6
LRFN4-202ENST00000393952 NPAS3Q8IXF0 933 aa25.05■■□□□ 1.6
LRFN4-202ENST00000393952 NOA1Q8NC60 698 aaKnown RBP25.05■■□□□ 1.6
LRFN4-202ENST00000393952 MYEOVQ96EZ4 313 aa25.05■■□□□ 1.6
LRFN4-202ENST00000393952 DDX47Q9H0S4 455 aaKnown RBP25.05■■□□□ 1.6
LRFN4-202ENST00000393952 STIM2Q9P246 746 aa25.05■■□□□ 1.6
LRFN4-202ENST00000393952 LSM7Q9UK45 103 aaKnown RBP25.05■■□□□ 1.6
LRFN4-202ENST00000393952 SH3BP1Q9Y3L3 701 aa25.05■■□□□ 1.6
LRFN4-202ENST00000393952 DOCK4Q8N1I0 1966 aa25.04■■□□□ 1.6
LRFN4-202ENST00000393952 CCDC188H7C350 402 aa25.04■■□□□ 1.6
LRFN4-202ENST00000393952 IRAK1P51617 712 aa25.04■■□□□ 1.6
LRFN4-202ENST00000393952 ATAT1Q5SQI0 421 aa25.04■■□□□ 1.6
LRFN4-202ENST00000393952 ACBD5Q5T8D3 534 aaPredicted RBP25.04■■□□□ 1.6
LRFN4-202ENST00000393952 LRRC31Q6UY01 552 aa25.04■■□□□ 1.6
LRFN4-202ENST00000393952 ARID3BQ8IVW6 561 aaPredicted RBP25.04■■□□□ 1.6
LRFN4-202ENST00000393952 KLHL7Q8IXQ5 586 aa25.04■■□□□ 1.6
LRFN4-202ENST00000393952 LGI2Q8N0V4 545 aa25.04■■□□□ 1.6
LRFN4-202ENST00000393952 RIN3Q8TB24 985 aa25.04■■□□□ 1.6
LRFN4-202ENST00000393952 ZSCAN18Q8TBC5 510 aaPredicted RBP25.04■■□□□ 1.6
LRFN4-202ENST00000393952 IGSF8Q969P0 613 aa25.04■■□□□ 1.6
LRFN4-202ENST00000393952 MSLNLQ96KJ4 702 aa25.04■■□□□ 1.6
LRFN4-202ENST00000393952 SZT2Q5T011 3432 aa25.03■■□□□ 1.6
LRFN4-202ENST00000393952 F5H5T6 163 aa25.03■■□□□ 1.6
LRFN4-202ENST00000393952 APOC4-APOC2K7ER74 178 aa25.03■■□□□ 1.6
LRFN4-202ENST00000393952 PHF2O75151 1096 aa25.03■■□□□ 1.6
LRFN4-202ENST00000393952 LATS1O95835 1130 aa25.03■■□□□ 1.6
LRFN4-202ENST00000393952 APOC2P02655 101 aa25.03■■□□□ 1.6
LRFN4-202ENST00000393952 ZFXP17010 805 aaPredicted RBP25.03■■□□□ 1.6
LRFN4-202ENST00000393952 OTUD4Q01804 1114 aaKnown RBP25.03■■□□□ 1.6
LRFN4-202ENST00000393952 CYP1B1Q16678 543 aa25.03■■□□□ 1.6
LRFN4-202ENST00000393952 ADGRF1Q5T601 910 aa25.03■■□□□ 1.6
LRFN4-202ENST00000393952 HTR3DQ70Z44 454 aa25.03■■□□□ 1.6
LRFN4-202ENST00000393952 DDX42Q86XP3 938 aaKnown RBP eCLIP25.03■■□□□ 1.6
LRFN4-202ENST00000393952 ACTL9Q8TC94 416 aa25.03■■□□□ 1.6
LRFN4-202ENST00000393952 MYLIPQ8WY64 445 aa25.03■■□□□ 1.6
LRFN4-202ENST00000393952 FGF13Q92913 245 aa25.03■■□□□ 1.6
LRFN4-202ENST00000393952 KRT12Q99456 494 aa25.03■■□□□ 1.6
LRFN4-202ENST00000393952 PRDM16Q9HAZ2 1276 aa25.03■■□□□ 1.6
LRFN4-202ENST00000393952 MPP6Q9NZW5 540 aa25.03■■□□□ 1.6
LRFN4-202ENST00000393952 STOML2Q9UJZ1 356 aa25.03■■□□□ 1.6
LRFN4-202ENST00000393952 IGLV3-10A0A075B6K4 115 aa25.02■■□□□ 1.6
LRFN4-202ENST00000393952 TRDMT1O14717 391 aaKnown RBP25.02■■□□□ 1.6
LRFN4-202ENST00000393952 TGM2P21980 687 aa25.02■■□□□ 1.6
LRFN4-202ENST00000393952 GBE1Q04446 702 aa25.02■■□□□ 1.6
LRFN4-202ENST00000393952 SNX1Q13596 522 aa25.02■■□□□ 1.6
LRFN4-202ENST00000393952 C12orf50Q8NA57 414 aaPredicted RBP25.02■■□□□ 1.6
LRFN4-202ENST00000393952 TTC13Q8NBP0 860 aa25.02■■□□□ 1.6
LRFN4-202ENST00000393952 MAGOHBQ96A72 148 aaKnown RBP25.02■■□□□ 1.6
LRFN4-202ENST00000393952 RPRD1AQ96P16 312 aaPredicted RBP25.02■■□□□ 1.6
LRFN4-202ENST00000393952 PPARGC1AQ9UBK2 798 aaKnown RBP25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms