RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 MARCH2Q9P0N8 246 aa16.98■□□□□ 0.31
SCN3B-202ENST00000392770 XPO1O14980 1071 aaKnown RBP16.98■□□□□ 0.31
SCN3B-202ENST00000392770 FGF10O15520 208 aaPredicted RBP16.98■□□□□ 0.31
SCN3B-202ENST00000392770 ZNF862O60290 1169 aa16.98■□□□□ 0.31
SCN3B-202ENST00000392770 LCA5LO95447 670 aa16.98■□□□□ 0.31
SCN3B-202ENST00000392770 PSMB4P28070 264 aa16.98■□□□□ 0.31
SCN3B-202ENST00000392770 HIRAP54198 1017 aaPredicted RBP16.98■□□□□ 0.31
SCN3B-202ENST00000392770 CCL23P55773 120 aa16.98■□□□□ 0.31
SCN3B-202ENST00000392770 POLE2P56282 527 aa16.98■□□□□ 0.31
SCN3B-202ENST00000392770 DPF3Q92784 378 aa16.98■□□□□ 0.31
SCN3B-202ENST00000392770 HSD3B7Q9H2F3 369 aa16.98■□□□□ 0.31
SCN3B-202ENST00000392770 GOLGA2P5Q9HBQ8 144 aa16.98■□□□□ 0.31
SCN3B-202ENST00000392770 SF3B1O75533 1304 aaKnown RBP eCLIP16.98■□□□□ 0.31
SCN3B-202ENST00000392770 ANKS3Q6ZW76 656 aa16.98■□□□□ 0.31
SCN3B-202ENST00000392770 EIF1ADQ8N9N8 165 aaKnown RBP16.98■□□□□ 0.31
SCN3B-202ENST00000392770 TCP10LQ8TDR4 215 aa16.98■□□□□ 0.31
SCN3B-202ENST00000392770 DUSP16Q9BY84 665 aa16.98■□□□□ 0.31
SCN3B-202ENST00000392770 HAO1Q9UJM8 370 aa16.98■□□□□ 0.31
SCN3B-202ENST00000392770 TMEM88BA6NKF7 163 aa16.98■□□□□ 0.31
SCN3B-202ENST00000392770 CST3P01034 146 aaPredicted RBP16.98■□□□□ 0.31
SCN3B-202ENST00000392770 ITGAVP06756 1048 aa16.98■□□□□ 0.31
SCN3B-202ENST00000392770 GP5P40197 560 aa16.98■□□□□ 0.31
SCN3B-202ENST00000392770 CD151P48509 253 aa16.98■□□□□ 0.31
SCN3B-202ENST00000392770 TTMPQ5BVD1 217 aa16.98■□□□□ 0.31
SCN3B-202ENST00000392770 CATSPER1Q8NEC5 780 aa16.98■□□□□ 0.31
SCN3B-202ENST00000392770 ART4Q93070 314 aa16.98■□□□□ 0.31
SCN3B-202ENST00000392770 FAR2Q96K12 515 aa16.98■□□□□ 0.31
SCN3B-202ENST00000392770 VAT1Q99536 393 aa16.98■□□□□ 0.31
SCN3B-202ENST00000392770 OSBPL1AQ9BXW6 950 aa16.98■□□□□ 0.31
SCN3B-202ENST00000392770 LHX5Q9H2C1 402 aa16.98■□□□□ 0.31
SCN3B-202ENST00000392770 SHBGP04278 402 aa16.97■□□□□ 0.31
SCN3B-202ENST00000392770 MZF1P28698 734 aaPredicted RBP16.97■□□□□ 0.31
SCN3B-202ENST00000392770 MSL3Q8N5Y2 521 aaKnown RBP16.97■□□□□ 0.31
SCN3B-202ENST00000392770 PKD2L2Q9NZM6 624 aa16.97■□□□□ 0.31
SCN3B-202ENST00000392770 DDX3YO15523 660 aaKnown RBP16.97■□□□□ 0.31
SCN3B-202ENST00000392770 TRIM16O95361 564 aa16.97■□□□□ 0.31
SCN3B-202ENST00000392770 RBP1P09455 135 aa16.97■□□□□ 0.31
SCN3B-202ENST00000392770 NUDT2P50583 147 aa16.97■□□□□ 0.31
SCN3B-202ENST00000392770 MRPS5P82675 430 aaKnown RBP16.97■□□□□ 0.31
SCN3B-202ENST00000392770 BTKQ06187 659 aa16.97■□□□□ 0.31
SCN3B-202ENST00000392770 FAAP100Q0VG06 881 aa16.97■□□□□ 0.31
SCN3B-202ENST00000392770 PDPK2PQ6A1A2 396 aa16.97■□□□□ 0.31
SCN3B-202ENST00000392770 CIPCQ9C0C6 399 aa16.97■□□□□ 0.31
SCN3B-202ENST00000392770 COG4Q9H9E3 785 aa16.97■□□□□ 0.31
SCN3B-202ENST00000392770 GID8Q9NWU2 228 aa16.97■□□□□ 0.31
SCN3B-202ENST00000392770 RPTORQ8N122 1335 aa16.97■□□□□ 0.31
SCN3B-202ENST00000392770 PKD1L3Q7Z443 1732 aa16.97■□□□□ 0.31
SCN3B-202ENST00000392770 MMP13P45452 471 aa16.97■□□□□ 0.31
SCN3B-202ENST00000392770 LLGL2Q6P1M3 1020 aa16.97■□□□□ 0.31
SCN3B-202ENST00000392770 POLNQ7Z5Q5 900 aa16.97■□□□□ 0.31
SCN3B-202ENST00000392770 JOSD2Q8TAC2 188 aa16.97■□□□□ 0.31
SCN3B-202ENST00000392770 UCMAQ8WVF2 138 aa16.97■□□□□ 0.31
SCN3B-202ENST00000392770 ZNF446Q9NWS9 450 aa16.97■□□□□ 0.31
SCN3B-202ENST00000392770 A0A0A0MRY4 1105 aa16.97■□□□□ 0.31
SCN3B-202ENST00000392770 AKAP10O43572 662 aa16.97■□□□□ 0.31
SCN3B-202ENST00000392770 LZTS3O60299 673 aaPredicted RBP16.97■□□□□ 0.31
SCN3B-202ENST00000392770 USP12O75317 370 aa16.97■□□□□ 0.31
SCN3B-202ENST00000392770 PBLDP30039 288 aaPredicted RBP16.97■□□□□ 0.31
SCN3B-202ENST00000392770 PPM1LQ5SGD2 360 aa16.97■□□□□ 0.31
SCN3B-202ENST00000392770 SPATA13Q96N96 652 aa16.97■□□□□ 0.31
SCN3B-202ENST00000392770 GOT1P17174 413 aa16.97■□□□□ 0.31
SCN3B-202ENST00000392770 CCDC15Q0P6D6 951 aa16.97■□□□□ 0.31
SCN3B-202ENST00000392770 LRRC36Q1X8D7 754 aa16.97■□□□□ 0.31
SCN3B-202ENST00000392770 PALB2Q86YC2 1186 aa16.97■□□□□ 0.31
SCN3B-202ENST00000392770 LRRN4Q8WUT4 740 aa16.97■□□□□ 0.31
SCN3B-202ENST00000392770 LENG9Q96B70 501 aa16.97■□□□□ 0.31
SCN3B-202ENST00000392770 PCDHA2Q9Y5H9 948 aa16.97■□□□□ 0.31
SCN3B-202ENST00000392770 SYCE1LA8MT33 242 aa16.96■□□□□ 0.31
SCN3B-202ENST00000392770 CHKAP35790 457 aa16.96■□□□□ 0.31
SCN3B-202ENST00000392770 IFNEQ86WN2 208 aa16.96■□□□□ 0.31
SCN3B-202ENST00000392770 ZNF333Q96JL9 665 aa16.96■□□□□ 0.31
SCN3B-202ENST00000392770 PRKD2Q9BZL6 878 aa16.96■□□□□ 0.31
SCN3B-202ENST00000392770 MYBL2P10244 700 aa16.96■□□□□ 0.31
SCN3B-202ENST00000392770 RPL22P35268 128 aaKnown RBP16.96■□□□□ 0.31
SCN3B-202ENST00000392770 RAP1GAP2Q684P5 730 aa16.96■□□□□ 0.31
SCN3B-202ENST00000392770 SEL1L3Q68CR1 1132 aa16.96■□□□□ 0.31
SCN3B-202ENST00000392770 PKN3Q6P5Z2 889 aa16.96■□□□□ 0.31
SCN3B-202ENST00000392770 MTDHQ86UE4 582 aaKnown RBP16.96■□□□□ 0.31
SCN3B-202ENST00000392770 ZNF670Q9BS34 389 aa16.96■□□□□ 0.31
SCN3B-202ENST00000392770 ZCWPW1Q9H0M4 648 aa16.96■□□□□ 0.31
SCN3B-202ENST00000392770 SYTL2Q9HCH5 934 aa16.96■□□□□ 0.31
SCN3B-202ENST00000392770 RBPJLQ9UBG7 517 aa16.96■□□□□ 0.31
SCN3B-202ENST00000392770 PCDHA11Q9Y5I1 949 aa16.96■□□□□ 0.31
SCN3B-202ENST00000392770 KCTD19Q17RG1 926 aaPredicted RBP16.96■□□□□ 0.31
SCN3B-202ENST00000392770 FAM35AQ86V20 835 aa16.96■□□□□ 0.31
SCN3B-202ENST00000392770 PRR23AA6NEV1 266 aa16.96■□□□□ 0.31
SCN3B-202ENST00000392770 GOLGA8TH3BQL2 631 aa16.96■□□□□ 0.31
SCN3B-202ENST00000392770 TRDMT1O14717 391 aaKnown RBP16.96■□□□□ 0.31
SCN3B-202ENST00000392770 SPTLC1O15269 473 aa16.96■□□□□ 0.31
SCN3B-202ENST00000392770 CILPO75339 1184 aa16.96■□□□□ 0.31
SCN3B-202ENST00000392770 BANF1O75531 89 aa16.96■□□□□ 0.31
SCN3B-202ENST00000392770 VAPBO95292 243 aa16.96■□□□□ 0.31
SCN3B-202ENST00000392770 KRT16P08779 473 aa16.96■□□□□ 0.31
SCN3B-202ENST00000392770 BRCC3P46736 316 aa16.96■□□□□ 0.31
SCN3B-202ENST00000392770 CORO7P57737 925 aa16.96■□□□□ 0.31
SCN3B-202ENST00000392770 ITGA7Q13683 1181 aa16.96■□□□□ 0.31
SCN3B-202ENST00000392770 CCDC153Q494R4 210 aa16.96■□□□□ 0.31
SCN3B-202ENST00000392770 XYLT1Q86Y38 959 aa16.96■□□□□ 0.31
SCN3B-202ENST00000392770 TUBGCP3Q96CW5 907 aa16.96■□□□□ 0.31
SCN3B-202ENST00000392770 EIF2AQ9BY44 585 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms