RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 TRAF3Q13114 568 aa20.13■□□□□ 0.81
SHANK1-203ENST00000391813 ZCCHC23Q6ZST2 131 aa20.13■□□□□ 0.81
SHANK1-203ENST00000391813 EID3Q8N140 333 aa20.13■□□□□ 0.81
SHANK1-203ENST00000391813 EPS8L1Q8TE68 723 aa20.13■□□□□ 0.81
SHANK1-203ENST00000391813 NFAT5O94916 1531 aa20.13■□□□□ 0.81
SHANK1-203ENST00000391813 BIRC5O15392 142 aa20.13■□□□□ 0.81
SHANK1-203ENST00000391813 CYP1A2P05177 515 aa20.13■□□□□ 0.81
SHANK1-203ENST00000391813 CYP51A1Q16850 503 aa20.13■□□□□ 0.81
SHANK1-203ENST00000391813 STK32CQ86UX6 486 aa20.13■□□□□ 0.81
SHANK1-203ENST00000391813 ECHDC2Q86YB7 292 aa20.13■□□□□ 0.81
SHANK1-203ENST00000391813 PABPC5Q96DU9 382 aaKnown RBP20.13■□□□□ 0.81
SHANK1-203ENST00000391813 MRC1P22897 1456 aa20.13■□□□□ 0.81
SHANK1-203ENST00000391813 MAGEC1O60732 1142 aa20.13■□□□□ 0.81
SHANK1-203ENST00000391813 KATNA1O75449 491 aa20.13■□□□□ 0.81
SHANK1-203ENST00000391813 COX4I1P13073 169 aa20.13■□□□□ 0.81
SHANK1-203ENST00000391813 FAM172AQ8WUF8 416 aa20.13■□□□□ 0.81
SHANK1-203ENST00000391813 RNPEPQ9H4A4 650 aa20.13■□□□□ 0.81
SHANK1-203ENST00000391813 VTA1Q9NP79 307 aa20.13■□□□□ 0.81
SHANK1-203ENST00000391813 H2AFY2Q9P0M6 372 aaPredicted RBP20.13■□□□□ 0.81
SHANK1-203ENST00000391813 SNAP91O60641 907 aa20.12■□□□□ 0.81
SHANK1-203ENST00000391813 FRG1Q14331 258 aaKnown RBP20.12■□□□□ 0.81
SHANK1-203ENST00000391813 NOTUMQ6P988 496 aa20.12■□□□□ 0.81
SHANK1-203ENST00000391813 ABRAXAS1Q6UWZ7 409 aa20.12■□□□□ 0.81
SHANK1-203ENST00000391813 TTC7BQ86TV6 843 aa20.12■□□□□ 0.81
SHANK1-203ENST00000391813 IRF2BP1Q8IU81 584 aa20.12■□□□□ 0.81
SHANK1-203ENST00000391813 ZDHHC13Q8IUH4 622 aa20.12■□□□□ 0.81
SHANK1-203ENST00000391813 C19orf18Q8NEA5 215 aa20.12■□□□□ 0.81
SHANK1-203ENST00000391813 ADCY4Q8NFM4 1077 aa20.12■□□□□ 0.81
SHANK1-203ENST00000391813 SLC7A14Q8TBB6 771 aa20.12■□□□□ 0.81
SHANK1-203ENST00000391813 ZNF606Q8WXB4 792 aa20.12■□□□□ 0.81
SHANK1-203ENST00000391813 UGT2B28Q9BY64 529 aa20.12■□□□□ 0.81
SHANK1-203ENST00000391813 CLK4Q9HAZ1 481 aaKnown RBP20.12■□□□□ 0.81
SHANK1-203ENST00000391813 RGSL1A5PLK6 1076 aa20.12■□□□□ 0.81
SHANK1-203ENST00000391813 NCAM2O15394 837 aa20.12■□□□□ 0.81
SHANK1-203ENST00000391813 TKTP29401 623 aaKnown RBP20.12■□□□□ 0.81
SHANK1-203ENST00000391813 MAPRE1Q15691 268 aaKnown RBP20.12■□□□□ 0.81
SHANK1-203ENST00000391813 BROXQ5VW32 411 aa20.12■□□□□ 0.81
SHANK1-203ENST00000391813 FAM45BPQ6NSW5 357 aa20.12■□□□□ 0.81
SHANK1-203ENST00000391813 CYP2R1Q6VVX0 501 aa20.12■□□□□ 0.81
SHANK1-203ENST00000391813 PLEKHG4BQ96PX9 1271 aa20.12■□□□□ 0.81
SHANK1-203ENST00000391813 PDCD2LQ9BRP1 358 aa20.12■□□□□ 0.81
SHANK1-203ENST00000391813 REXO4Q9GZR2 422 aaKnown RBP20.12■□□□□ 0.81
SHANK1-203ENST00000391813 ZCWPW1Q9H0M4 648 aa20.12■□□□□ 0.81
SHANK1-203ENST00000391813 ABHD16BQ9H3Z7 469 aa20.12■□□□□ 0.81
SHANK1-203ENST00000391813 CYP4F12Q9HCS2 524 aa20.12■□□□□ 0.81
SHANK1-203ENST00000391813 DDX4Q9NQI0 724 aaKnown RBP20.12■□□□□ 0.81
SHANK1-203ENST00000391813 H3BNX3 289 aa20.12■□□□□ 0.81
SHANK1-203ENST00000391813 TPBGLP0DKB5 382 aa20.12■□□□□ 0.81
SHANK1-203ENST00000391813 FECHP22830 423 aa20.12■□□□□ 0.81
SHANK1-203ENST00000391813 RPL14P50914 215 aaKnown RBP20.12■□□□□ 0.81
SHANK1-203ENST00000391813 PKNOX1P55347 436 aa20.12■□□□□ 0.81
SHANK1-203ENST00000391813 LRRC74AQ0VAA2 488 aa20.12■□□□□ 0.81
SHANK1-203ENST00000391813 MSLNQ13421 630 aaPredicted RBP20.12■□□□□ 0.81
SHANK1-203ENST00000391813 PCSK7Q16549 785 aa20.12■□□□□ 0.81
SHANK1-203ENST00000391813 SPANXN3Q5MJ09 141 aa20.12■□□□□ 0.81
SHANK1-203ENST00000391813 PIGWQ7Z7B1 504 aa20.12■□□□□ 0.81
SHANK1-203ENST00000391813 MCRS1Q96EZ8 462 aa20.12■□□□□ 0.81
SHANK1-203ENST00000391813 AAASQ9NRG9 546 aa20.12■□□□□ 0.81
SHANK1-203ENST00000391813 SQORQ9Y6N5 450 aa20.12■□□□□ 0.81
SHANK1-203ENST00000391813 PRPF4O43172 522 aaKnown RBP eCLIP20.11■□□□□ 0.81
SHANK1-203ENST00000391813 PTPRAP18433 802 aa20.11■□□□□ 0.81
SHANK1-203ENST00000391813 CCT8P50990 548 aa20.11■□□□□ 0.81
SHANK1-203ENST00000391813 DPYSL3Q14195 570 aa20.11■□□□□ 0.81
SHANK1-203ENST00000391813 DEFB115Q30KQ5 88 aa20.11■□□□□ 0.81
SHANK1-203ENST00000391813 IRF2BP2Q7Z5L9 587 aa20.11■□□□□ 0.81
SHANK1-203ENST00000391813 PQLC1Q8N2U9 271 aa20.11■□□□□ 0.81
SHANK1-203ENST00000391813 CISHQ9NSE2 258 aa20.11■□□□□ 0.81
SHANK1-203ENST00000391813 TJP2Q9UDY2 1190 aa20.11■□□□□ 0.81
SHANK1-203ENST00000391813 PSMD13Q9UNM6 376 aa20.11■□□□□ 0.81
SHANK1-203ENST00000391813 GLTPD2A6NH11 291 aa20.11■□□□□ 0.81
SHANK1-203ENST00000391813 VWA5AO00534 786 aa20.11■□□□□ 0.81
SHANK1-203ENST00000391813 HOXA2O43364 376 aa20.11■□□□□ 0.81
SHANK1-203ENST00000391813 BNIP3LO60238 219 aa20.11■□□□□ 0.81
SHANK1-203ENST00000391813 AVPR1AP37288 418 aa20.11■□□□□ 0.81
SHANK1-203ENST00000391813 RAB15P59190 212 aa20.11■□□□□ 0.81
SHANK1-203ENST00000391813 LPIN1Q14693 890 aa20.11■□□□□ 0.81
SHANK1-203ENST00000391813 ST13P5Q8NFI4 369 aaPredicted RBP20.11■□□□□ 0.81
SHANK1-203ENST00000391813 SYTL5Q8TDW5 730 aaPredicted RBP20.11■□□□□ 0.81
SHANK1-203ENST00000391813 PPP1R10Q96QC0 940 aaKnown RBP20.11■□□□□ 0.81
SHANK1-203ENST00000391813 SEPHS2Q99611 448 aa20.11■□□□□ 0.81
SHANK1-203ENST00000391813 C6orf62Q9GZU0 229 aaPredicted RBP20.11■□□□□ 0.81
SHANK1-203ENST00000391813 ADAMTSL3P82987 1691 aa20.11■□□□□ 0.81
SHANK1-203ENST00000391813 ALOX15BO15296 676 aa20.11■□□□□ 0.81
SHANK1-203ENST00000391813 CHADO15335 359 aa20.11■□□□□ 0.81
SHANK1-203ENST00000391813 CYTH3O43739 400 aa20.11■□□□□ 0.81
SHANK1-203ENST00000391813 TADA2AO75478 443 aa20.11■□□□□ 0.81
SHANK1-203ENST00000391813 MAP3K6O95382 1288 aa20.11■□□□□ 0.81
SHANK1-203ENST00000391813 PGK2P07205 417 aa20.11■□□□□ 0.81
SHANK1-203ENST00000391813 RAD51Q06609 339 aa20.11■□□□□ 0.81
SHANK1-203ENST00000391813 NCF4Q15080 339 aa20.11■□□□□ 0.81
SHANK1-203ENST00000391813 ATG16L2Q8NAA4 619 aa20.11■□□□□ 0.81
SHANK1-203ENST00000391813 COLGALT1Q8NBJ5 622 aa20.11■□□□□ 0.81
SHANK1-203ENST00000391813 RP9Q8TA86 221 aaKnown RBP20.11■□□□□ 0.81
SHANK1-203ENST00000391813 POLR1BQ9H9Y6 1135 aa20.11■□□□□ 0.81
SHANK1-203ENST00000391813 NMRAL1Q9HBL8 299 aa20.11■□□□□ 0.81
SHANK1-203ENST00000391813 SYTL2Q9HCH5 934 aa20.11■□□□□ 0.81
SHANK1-203ENST00000391813 POLG2Q9UHN1 485 aa20.11■□□□□ 0.81
SHANK1-203ENST00000391813 VANGL2Q9ULK5 521 aa20.11■□□□□ 0.81
SHANK1-203ENST00000391813 BTBD3Q9Y2F9 522 aa20.11■□□□□ 0.81
SHANK1-203ENST00000391813 LINC00854A0A1B0GVQ3 168 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 405 ms