RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 ELFN1P0C7U0 828 aa3.25□□□□□ -1.89
TRAJ40-201ENST00000390497 HSPA1AP0DMV8 641 aaKnown RBP3.25□□□□□ -1.89
TRAJ40-201ENST00000390497 HSPA1BP0DMV9 641 aaKnown RBP3.25□□□□□ -1.89
TRAJ40-201ENST00000390497 MAKP20794 623 aa3.25□□□□□ -1.89
TRAJ40-201ENST00000390497 SLC8A1P32418 973 aa3.25□□□□□ -1.89
TRAJ40-201ENST00000390497 GALNSP34059 522 aa3.25□□□□□ -1.89
TRAJ40-201ENST00000390497 GPC5P78333 572 aa3.25□□□□□ -1.89
TRAJ40-201ENST00000390497 MRPS35P82673 323 aaKnown RBP3.25□□□□□ -1.89
TRAJ40-201ENST00000390497 HOXA4Q00056 320 aaPredicted RBP3.25□□□□□ -1.89
TRAJ40-201ENST00000390497 FOXD4Q12950 439 aaPredicted RBP3.25□□□□□ -1.89
TRAJ40-201ENST00000390497 SEC23BQ15437 767 aa3.25□□□□□ -1.89
TRAJ40-201ENST00000390497 FAM153CQ494X1 144 aa3.25□□□□□ -1.89
TRAJ40-201ENST00000390497 SPATS1Q496A3 300 aa3.25□□□□□ -1.89
TRAJ40-201ENST00000390497 RUNDC3AQ59EK9 446 aa3.25□□□□□ -1.89
TRAJ40-201ENST00000390497 SPDYAQ5MJ70 313 aa3.25□□□□□ -1.89
TRAJ40-201ENST00000390497 SLC9C2Q5TAH2 1124 aa3.25□□□□□ -1.89
TRAJ40-201ENST00000390497 C16orf89Q6UX73 402 aa3.25□□□□□ -1.89
TRAJ40-201ENST00000390497 GRASPQ7Z6J2 395 aaPredicted RBP3.25□□□□□ -1.89
TRAJ40-201ENST00000390497 TICAM2Q86XR7 235 aa3.25□□□□□ -1.89
TRAJ40-201ENST00000390497 PALM2Q8IXS6 379 aa3.25□□□□□ -1.89
TRAJ40-201ENST00000390497 CCDC89Q8N998 374 aa3.25□□□□□ -1.89
TRAJ40-201ENST00000390497 TNIP2Q8NFZ5 429 aa3.25□□□□□ -1.89
TRAJ40-201ENST00000390497 TDRD7Q8NHU6 1098 aaKnown RBP3.25□□□□□ -1.89
TRAJ40-201ENST00000390497 ADAMTS18Q8TE60 1221 aa3.25□□□□□ -1.89
TRAJ40-201ENST00000390497 LINC00476Q8WZB0 136 aa3.25□□□□□ -1.89
TRAJ40-201ENST00000390497 NCSTNQ92542 709 aa3.25□□□□□ -1.89
TRAJ40-201ENST00000390497 CAVIN3Q969G5 261 aa3.25□□□□□ -1.89
TRAJ40-201ENST00000390497 ZUFSPQ96AP4 578 aa3.25□□□□□ -1.89
TRAJ40-201ENST00000390497 C20orf173Q96LM9 149 aa3.25□□□□□ -1.89
TRAJ40-201ENST00000390497 CCDC17Q96LX7 622 aa3.25□□□□□ -1.89
TRAJ40-201ENST00000390497 LENG8Q96PV6 779 aaPredicted RBP3.25□□□□□ -1.89
TRAJ40-201ENST00000390497 FYTTD1Q96QD9 318 aaKnown RBP3.25□□□□□ -1.89
TRAJ40-201ENST00000390497 ADGRE3Q9BY15 652 aa3.25□□□□□ -1.89
TRAJ40-201ENST00000390497 AGXT2Q9BYV1 514 aa3.25□□□□□ -1.89
TRAJ40-201ENST00000390497 RMI1Q9H9A7 625 aa3.25□□□□□ -1.89
TRAJ40-201ENST00000390497 ABHD10Q9NUJ1 306 aa3.25□□□□□ -1.89
TRAJ40-201ENST00000390497 ALKBH4Q9NXW9 302 aa3.25□□□□□ -1.89
TRAJ40-201ENST00000390497 TBC1D14Q9P2M4 693 aa3.25□□□□□ -1.89
TRAJ40-201ENST00000390497 ASAP1Q9ULH1 1129 aa3.25□□□□□ -1.89
TRAJ40-201ENST00000390497 COPG1Q9Y678 874 aaKnown RBP3.25□□□□□ -1.89
TRAJ40-201ENST00000390497 A0A1W2PPH5 198 aa3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 TMEM232C9JQI7 657 aa3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 C1QTNF3-AMACRE9PGA6 284 aa3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 PEX12O00623 359 aa3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 FOXD2O60548 495 aaPredicted RBP3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 USP12O75317 370 aa3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 SGPL1O95470 568 aa3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 HLA-DQA2P01906 255 aa3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 C1SP09871 688 aa3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 ACP5P13686 325 aa3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 ZNF20P17024 532 aa3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 ENGP17813 658 aa3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 SFPQP23246 707 aaKnown RBP eCLIP3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 CXCR5P32302 372 aa3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 HOXD12P35452 270 aa3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 MPLP40238 635 aa3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 AGTR2P50052 363 aa3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 CCT8P50990 548 aa3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 COPB1P53618 953 aaKnown RBP3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 CDH15P55291 814 aa3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 FAM3BP58499 235 aaPredicted RBP3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 TAS2R50P59544 299 aa3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 CDK18Q07002 472 aa3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 LMAN2Q12907 356 aa3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 KCTD2Q14681 263 aa3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 CNGA3Q16281 694 aa3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 LSM12Q3MHD2 195 aaKnown RBP3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 MIIPQ5JXC2 388 aa3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 ITPRIPL1Q6GPH6 555 aa3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 VSTM1Q6UX27 236 aa3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 KYAT3Q6YP21 454 aaKnown RBP3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 SYNE3Q6ZMZ3 975 aa3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 TMTC3Q6ZXV5 915 aa3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 R3HCC1LQ7Z5L2 792 aaKnown RBP3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 CCDC105Q8IYK2 499 aa3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 TERB1Q8NA31 727 aa3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 ZMIZ2Q8NF64 920 aa3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 LINS1Q8NG48 757 aa3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 NFKBIDQ8NI38 313 aa3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 AKAP1Q92667 903 aaKnown RBP eCLIP3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 PRR11Q96HE9 360 aaPredicted RBP3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 ZNF845Q96IR2 970 aaPredicted RBP3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 C5orf34Q96MH7 638 aa3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 HS6ST2Q96MM7 605 aa3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 ELOVL1Q9BW60 279 aa3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 NPLQ9BXD5 320 aaPredicted RBP3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 TRIM2Q9C040 744 aa3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 INTS2Q9H0H0 1204 aaKnown RBP3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 PRDM13Q9H4Q3 707 aa3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 STN1Q9H668 368 aaKnown RBP3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 SLC2A4RGQ9NR83 387 aa3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 BLOC1S4Q9NUP1 217 aa3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 THAP1Q9NVV9 213 aa3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 BEX4Q9NWD9 120 aaPredicted RBP3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 SYBUQ9NX95 663 aa3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 TAS2R10Q9NYW0 307 aa3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 ORC3Q9UBD5 711 aaPredicted RBP3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 SLC25A10Q9UBX3 287 aaPredicted RBP3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 VPS4AQ9UN37 437 aa3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 REXO2Q9Y3B8 237 aaKnown RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms