RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 DHFR2Q86XF0 187 aa14.6□□□□□ -0.07
RTF1-201ENST00000389629 C10orf107Q8IVU9 208 aa14.6□□□□□ -0.07
RTF1-201ENST00000389629 KBTBD2Q8IY47 623 aa14.6□□□□□ -0.07
RTF1-201ENST00000389629 IPMKQ8NFU5 416 aa14.6□□□□□ -0.07
RTF1-201ENST00000389629 NKD2Q969F2 451 aaPredicted RBP14.6□□□□□ -0.07
RTF1-201ENST00000389629 GJD4Q96KN9 370 aaPredicted RBP14.6□□□□□ -0.07
RTF1-201ENST00000389629 POLR1BQ9H9Y6 1135 aa14.6□□□□□ -0.07
RTF1-201ENST00000389629 PSMD13Q9UNM6 376 aa14.6□□□□□ -0.07
RTF1-201ENST00000389629 AP3B1O00203 1094 aa14.59□□□□□ -0.07
RTF1-201ENST00000389629 KCNA2P16389 499 aa14.59□□□□□ -0.07
RTF1-201ENST00000389629 KCNT2Q6UVM3 1135 aa14.59□□□□□ -0.07
RTF1-201ENST00000389629 MPZL3Q6UWV2 235 aa14.59□□□□□ -0.07
RTF1-201ENST00000389629 PLEKHO2Q8TD55 490 aa14.59□□□□□ -0.07
RTF1-201ENST00000389629 CD101Q93033 1021 aa14.59□□□□□ -0.07
RTF1-201ENST00000389629 MMP19Q99542 508 aa14.59□□□□□ -0.07
RTF1-201ENST00000389629 NOL6Q9H6R4 1146 aaKnown RBP14.59□□□□□ -0.07
RTF1-201ENST00000389629 XPNPEP3Q9NQH7 507 aa14.59□□□□□ -0.07
RTF1-201ENST00000389629 PTTG2Q9NZH5 202 aa14.59□□□□□ -0.07
RTF1-201ENST00000389629 LINC00854A0A1B0GVQ3 168 aa14.59□□□□□ -0.07
RTF1-201ENST00000389629 UBDO15205 165 aa14.59□□□□□ -0.07
RTF1-201ENST00000389629 INPP4BO15327 924 aa14.59□□□□□ -0.07
RTF1-201ENST00000389629 OR6B1O95007 311 aa14.59□□□□□ -0.07
RTF1-201ENST00000389629 BPGMP07738 259 aa14.59□□□□□ -0.07
RTF1-201ENST00000389629 CCDC159P0C7I6 412 aa14.59□□□□□ -0.07
RTF1-201ENST00000389629 TCF4P15884 667 aa14.59□□□□□ -0.07
RTF1-201ENST00000389629 GP5P40197 560 aa14.59□□□□□ -0.07
RTF1-201ENST00000389629 CLCN3P51790 818 aa14.59□□□□□ -0.07
RTF1-201ENST00000389629 GDF10P55107 478 aa14.59□□□□□ -0.07
RTF1-201ENST00000389629 ZCCHC7Q8N3Z6 543 aaKnown RBP14.59□□□□□ -0.07
RTF1-201ENST00000389629 ENDOVQ8N8Q3 282 aaKnown RBP14.59□□□□□ -0.07
RTF1-201ENST00000389629 BANPQ8N9N5 519 aa14.59□□□□□ -0.07
RTF1-201ENST00000389629 ZNF280CQ8ND82 737 aa14.59□□□□□ -0.07
RTF1-201ENST00000389629 SLC7A6OSQ96CW6 309 aaPredicted RBP14.59□□□□□ -0.07
RTF1-201ENST00000389629 WDR55Q9H6Y2 383 aaPredicted RBP14.59□□□□□ -0.07
RTF1-201ENST00000389629 TPH1P17752 444 aa14.59□□□□□ -0.07
RTF1-201ENST00000389629 TNIP2Q8NFZ5 429 aa14.59□□□□□ -0.07
RTF1-201ENST00000389629 KIF17Q9P2E2 1029 aa14.59□□□□□ -0.07
RTF1-201ENST00000389629 TSPAN16Q9UKR8 245 aa14.59□□□□□ -0.07
RTF1-201ENST00000389629 SNX2O60749 519 aa14.59□□□□□ -0.07
RTF1-201ENST00000389629 TGDSO95455 350 aa14.59□□□□□ -0.07
RTF1-201ENST00000389629 FASP25445 335 aa14.59□□□□□ -0.07
RTF1-201ENST00000389629 FSTL1Q12841 308 aa14.59□□□□□ -0.07
RTF1-201ENST00000389629 ZDHHC14Q8IZN3 488 aa14.59□□□□□ -0.07
RTF1-201ENST00000389629 ABHD8Q96I13 439 aa14.59□□□□□ -0.07
RTF1-201ENST00000389629 GIMAP4Q9NUV9 329 aa14.59□□□□□ -0.07
RTF1-201ENST00000389629 MAP3K20Q9NYL2 800 aaKnown RBP14.59□□□□□ -0.07
RTF1-201ENST00000389629 LRP6O75581 1613 aa14.59□□□□□ -0.07
RTF1-201ENST00000389629 E5RJQ4 531 aa14.58□□□□□ -0.07
RTF1-201ENST00000389629 SIN3BO75182 1162 aa14.58□□□□□ -0.07
RTF1-201ENST00000389629 ATP5BP06576 529 aaKnown RBP14.58□□□□□ -0.07
RTF1-201ENST00000389629 CFHP08603 1231 aa14.58□□□□□ -0.07
RTF1-201ENST00000389629 RGS21Q2M5E4 152 aa14.58□□□□□ -0.07
RTF1-201ENST00000389629 ZNF618Q5T7W0 954 aa14.58□□□□□ -0.07
RTF1-201ENST00000389629 MFSD4BQ5TF39 518 aa14.58□□□□□ -0.07
RTF1-201ENST00000389629 ASRGL1Q7L266 308 aa14.58□□□□□ -0.07
RTF1-201ENST00000389629 SCUBE3Q8IX30 993 aa14.58□□□□□ -0.07
RTF1-201ENST00000389629 FAM47BQ8NA70 645 aa14.58□□□□□ -0.07
RTF1-201ENST00000389629 C7orf43Q8WVR3 580 aa14.58□□□□□ -0.07
RTF1-201ENST00000389629 TUBGCP3Q96CW5 907 aa14.58□□□□□ -0.07
RTF1-201ENST00000389629 PTPRHQ9HD43 1115 aa14.58□□□□□ -0.07
RTF1-201ENST00000389629 PARNO95453 639 aaKnown RBP14.58□□□□□ -0.08
RTF1-201ENST00000389629 CD48P09326 243 aa14.58□□□□□ -0.08
RTF1-201ENST00000389629 HADHAP40939 763 aa14.58□□□□□ -0.08
RTF1-201ENST00000389629 RAP1GDS1P52306 607 aa14.58□□□□□ -0.08
RTF1-201ENST00000389629 PCSK7Q16549 785 aa14.58□□□□□ -0.08
RTF1-201ENST00000389629 FAM136AQ96C01 138 aa14.58□□□□□ -0.08
RTF1-201ENST00000389629 NAT9Q9BTE0 207 aa14.58□□□□□ -0.08
RTF1-201ENST00000389629 ZNF408Q9H9D4 720 aa14.58□□□□□ -0.08
RTF1-201ENST00000389629 ATAD3AQ9NVI7 634 aa14.58□□□□□ -0.08
RTF1-201ENST00000389629 MYPNQ86TC9 1320 aa14.58□□□□□ -0.08
RTF1-201ENST00000389629 KPNA4O00629 521 aaPredicted RBP14.58□□□□□ -0.08
RTF1-201ENST00000389629 CYP1A1P04798 512 aaPredicted RBP14.58□□□□□ -0.08
RTF1-201ENST00000389629 XIAPP98170 497 aa14.58□□□□□ -0.08
RTF1-201ENST00000389629 LAMC2Q13753 1193 aa14.58□□□□□ -0.08
RTF1-201ENST00000389629 DGCR6LQ9BY27 220 aa14.58□□□□□ -0.08
RTF1-201ENST00000389629 LRRC40Q9H9A6 602 aa14.58□□□□□ -0.08
RTF1-201ENST00000389629 TIMMDC1Q9NPL8 285 aa14.58□□□□□ -0.08
RTF1-201ENST00000389629 MRASO14807 208 aa14.58□□□□□ -0.08
RTF1-201ENST00000389629 PFDN6O15212 129 aa14.58□□□□□ -0.08
RTF1-201ENST00000389629 PHGDHO43175 533 aaKnown RBP14.58□□□□□ -0.08
RTF1-201ENST00000389629 TIMM44O43615 452 aa14.58□□□□□ -0.08
RTF1-201ENST00000389629 TRUB2O95900 331 aaKnown RBP14.58□□□□□ -0.08
RTF1-201ENST00000389629 CCNE2O96020 404 aa14.58□□□□□ -0.08
RTF1-201ENST00000389629 APOA4P06727 396 aa14.58□□□□□ -0.08
RTF1-201ENST00000389629 TSHRP16473 764 aa14.58□□□□□ -0.08
RTF1-201ENST00000389629 GAD2Q05329 585 aa14.58□□□□□ -0.08
RTF1-201ENST00000389629 PRKAA1Q13131 559 aa14.58□□□□□ -0.08
RTF1-201ENST00000389629 ARCQ7LC44 396 aa14.58□□□□□ -0.08
RTF1-201ENST00000389629 TMC7Q7Z402 723 aa14.58□□□□□ -0.08
RTF1-201ENST00000389629 LMO3Q8TAP4 145 aa14.58□□□□□ -0.08
RTF1-201ENST00000389629 CERKQ8TCT0 537 aa14.58□□□□□ -0.08
RTF1-201ENST00000389629 PHF21BQ96EK2 531 aa14.58□□□□□ -0.08
RTF1-201ENST00000389629 PANX3Q96QZ0 392 aa14.58□□□□□ -0.08
RTF1-201ENST00000389629 MTG1Q9BT17 334 aaPredicted RBP14.58□□□□□ -0.08
RTF1-201ENST00000389629 GGA3Q9NZ52 723 aa14.58□□□□□ -0.08
RTF1-201ENST00000389629 MOCS2O96007 188 aaPredicted RBP14.57□□□□□ -0.08
RTF1-201ENST00000389629 S100A5P33763 92 aa14.57□□□□□ -0.08
RTF1-201ENST00000389629 GRIA3P42263 894 aa14.57□□□□□ -0.08
RTF1-201ENST00000389629 NDST1P52848 882 aa14.57□□□□□ -0.08
RTF1-201ENST00000389629 FASTKQ14296 549 aaKnown RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms