RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 LRCH1Q9Y2L9 728 aa17.54■□□□□ 0.4
SGCB-201ENST00000381431 PPP2R3BQ9Y5P8 575 aa17.54■□□□□ 0.4
SGCB-201ENST00000381431 MAGEB16A2A368 324 aa17.54■□□□□ 0.4
SGCB-201ENST00000381431 PLSCR1O15162 318 aa17.54■□□□□ 0.4
SGCB-201ENST00000381431 ITGAVP06756 1048 aa17.54■□□□□ 0.4
SGCB-201ENST00000381431 SLC25A3Q00325 362 aa17.54■□□□□ 0.4
SGCB-201ENST00000381431 OASLQ15646 514 aaKnown RBP17.54■□□□□ 0.4
SGCB-201ENST00000381431 TMC7Q7Z402 723 aa17.54■□□□□ 0.4
SGCB-201ENST00000381431 RNF180Q86T96 592 aa17.54■□□□□ 0.4
SGCB-201ENST00000381431 C12orf56Q8IXR9 622 aa17.54■□□□□ 0.4
SGCB-201ENST00000381431 MIER2Q8N344 545 aa17.54■□□□□ 0.4
SGCB-201ENST00000381431 FOPNLQ96NB1 174 aa17.54■□□□□ 0.4
SGCB-201ENST00000381431 NRDE2Q9H7Z3 1164 aa17.54■□□□□ 0.4
SGCB-201ENST00000381431 HPS4Q9NQG7 708 aa17.54■□□□□ 0.4
SGCB-201ENST00000381431 PCDHB7Q9Y5E2 793 aa17.54■□□□□ 0.4
SGCB-201ENST00000381431 IGLV3-22A0A075B6J6 115 aa17.54■□□□□ 0.4
SGCB-201ENST00000381431 OXCT1P55809 520 aa17.54■□□□□ 0.4
SGCB-201ENST00000381431 GRTP1Q5TC63 336 aa17.54■□□□□ 0.4
SGCB-201ENST00000381431 TLK2Q86UE8 772 aa17.54■□□□□ 0.4
SGCB-201ENST00000381431 RIOX2Q8IUF8 465 aa17.54■□□□□ 0.4
SGCB-201ENST00000381431 POPDC2Q9HBU9 364 aa17.54■□□□□ 0.4
SGCB-201ENST00000381431 LRRC4CQ9HCJ2 640 aa17.54■□□□□ 0.4
SGCB-201ENST00000381431 ACTL7BQ9Y614 415 aa17.54■□□□□ 0.4
SGCB-201ENST00000381431 A0A0A0MRY4 1105 aa17.54■□□□□ 0.4
SGCB-201ENST00000381431 BUD23O43709 281 aaKnown RBP17.54■□□□□ 0.4
SGCB-201ENST00000381431 STRNO43815 780 aa17.54■□□□□ 0.4
SGCB-201ENST00000381431 LYPLA2O95372 231 aa17.54■□□□□ 0.4
SGCB-201ENST00000381431 CCDC81Q6ZN84 652 aa17.54■□□□□ 0.4
SGCB-201ENST00000381431 MICU2Q8IYU8 434 aa17.54■□□□□ 0.4
SGCB-201ENST00000381431 APBB2Q92870 758 aa17.54■□□□□ 0.4
SGCB-201ENST00000381431 WNT8BQ93098 351 aa17.54■□□□□ 0.4
SGCB-201ENST00000381431 SPATA13Q96N96 652 aa17.54■□□□□ 0.4
SGCB-201ENST00000381431 VTA1Q9NP79 307 aa17.54■□□□□ 0.4
SGCB-201ENST00000381431 TCRBV9S1A1TA0A576 114 aa17.53■□□□□ 0.4
SGCB-201ENST00000381431 NPM3O75607 178 aaKnown RBP17.53■□□□□ 0.4
SGCB-201ENST00000381431 CDH2P19022 906 aaPredicted RBP17.53■□□□□ 0.4
SGCB-201ENST00000381431 PEX5P50542 639 aa17.53■□□□□ 0.4
SGCB-201ENST00000381431 SLC35G1Q2M3R5 365 aa17.53■□□□□ 0.4
SGCB-201ENST00000381431 MECRQ9BV79 373 aa17.53■□□□□ 0.4
SGCB-201ENST00000381431 SMPD4Q9NXE4 827 aa17.53■□□□□ 0.4
SGCB-201ENST00000381431 SPASTQ9UBP0 616 aa17.53■□□□□ 0.4
SGCB-201ENST00000381431 OR12D3Q9UGF7 316 aa17.53■□□□□ 0.4
SGCB-201ENST00000381431 VPS9D1Q9Y2B5 631 aa17.53■□□□□ 0.4
SGCB-201ENST00000381431 SAC3D1A6NKF1 404 aa17.53■□□□□ 0.4
SGCB-201ENST00000381431 ALOX15BO15296 676 aa17.53■□□□□ 0.4
SGCB-201ENST00000381431 RAMP2O60895 175 aa17.53■□□□□ 0.4
SGCB-201ENST00000381431 H2AFYO75367 372 aaKnown RBP17.53■□□□□ 0.4
SGCB-201ENST00000381431 SERPINF2P08697 491 aa17.53■□□□□ 0.4
SGCB-201ENST00000381431 ITGB6P18564 788 aa17.53■□□□□ 0.4
SGCB-201ENST00000381431 RENBPP51606 427 aa17.53■□□□□ 0.4
SGCB-201ENST00000381431 ST8SIA6P61647 398 aa17.53■□□□□ 0.4
SGCB-201ENST00000381431 KRT72Q14CN4 511 aa17.53■□□□□ 0.4
SGCB-201ENST00000381431 ZSCAN18Q8TBC5 510 aaPredicted RBP17.53■□□□□ 0.4
SGCB-201ENST00000381431 JADE3Q92613 823 aa17.53■□□□□ 0.4
SGCB-201ENST00000381431 COLEC11Q9BWP8 271 aa17.53■□□□□ 0.4
SGCB-201ENST00000381431 B3GNT5Q9BYG0 378 aa17.53■□□□□ 0.4
SGCB-201ENST00000381431 RNPEPQ9H4A4 650 aa17.53■□□□□ 0.4
SGCB-201ENST00000381431 EXOSC4Q9NPD3 245 aaKnown RBP17.53■□□□□ 0.4
SGCB-201ENST00000381431 PDGFCQ9NRA1 345 aa17.53■□□□□ 0.4
SGCB-201ENST00000381431 VPS28Q9UK41 221 aa17.53■□□□□ 0.4
SGCB-201ENST00000381431 CRYL1Q9Y2S2 319 aa17.53■□□□□ 0.4
SGCB-201ENST00000381431 TBC1D12O60347 775 aa17.53■□□□□ 0.4
SGCB-201ENST00000381431 GOT1P17174 413 aa17.53■□□□□ 0.4
SGCB-201ENST00000381431 ACVR2BQ13705 512 aa17.53■□□□□ 0.4
SGCB-201ENST00000381431 PRAMEF19Q5SWL8 479 aa17.53■□□□□ 0.4
SGCB-201ENST00000381431 OTOAQ7RTW8 1153 aa17.53■□□□□ 0.4
SGCB-201ENST00000381431 SNRNP27Q8WVK2 155 aaKnown RBP17.53■□□□□ 0.4
SGCB-201ENST00000381431 C12orf65Q9H3J6 166 aaKnown RBP17.53■□□□□ 0.4
SGCB-201ENST00000381431 XPNPEP3Q9NQH7 507 aa17.53■□□□□ 0.4
SGCB-201ENST00000381431 SPDYE5A6NIY4 337 aa17.52■□□□□ 0.4
SGCB-201ENST00000381431 M0R3G1 203 aa17.52■□□□□ 0.4
SGCB-201ENST00000381431 CHADO15335 359 aa17.52■□□□□ 0.4
SGCB-201ENST00000381431 NOS2P35228 1153 aa17.52■□□□□ 0.4
SGCB-201ENST00000381431 CCDC153Q494R4 210 aa17.52■□□□□ 0.4
SGCB-201ENST00000381431 SPDYE7PQ495Y7 208 aa17.52■□□□□ 0.4
SGCB-201ENST00000381431 KYAT3Q6YP21 454 aaKnown RBP17.52■□□□□ 0.4
SGCB-201ENST00000381431 RIPOR1Q6ZS17 1223 aa17.52■□□□□ 0.4
SGCB-201ENST00000381431 P3H2Q8IVL5 708 aa17.52■□□□□ 0.4
SGCB-201ENST00000381431 SEPHS2Q99611 448 aa17.52■□□□□ 0.4
SGCB-201ENST00000381431 PRPF18Q99633 342 aaKnown RBP17.52■□□□□ 0.4
SGCB-201ENST00000381431 RBBP8Q99708 897 aa17.52■□□□□ 0.4
SGCB-201ENST00000381431 CPNE1Q99829 537 aa17.52■□□□□ 0.4
SGCB-201ENST00000381431 MAN1C1Q9NR34 630 aa17.52■□□□□ 0.4
SGCB-201ENST00000381431 SIGLEC1Q9BZZ2 1709 aa17.52■□□□□ 0.4
SGCB-201ENST00000381431 SRRM3A6NNA2 597 aaPredicted RBP17.52■□□□□ 0.4
SGCB-201ENST00000381431 TPBGLP0DKB5 382 aa17.52■□□□□ 0.4
SGCB-201ENST00000381431 PTPN1P18031 435 aaKnown RBP17.52■□□□□ 0.4
SGCB-201ENST00000381431 CLK2P49760 499 aaKnown RBP17.52■□□□□ 0.4
SGCB-201ENST00000381431 CHRNB3Q05901 458 aa17.52■□□□□ 0.4
SGCB-201ENST00000381431 NR6A1Q15406 480 aa17.52■□□□□ 0.4
SGCB-201ENST00000381431 CPNE8Q86YQ8 564 aa17.52■□□□□ 0.4
SGCB-201ENST00000381431 EFCAB3Q8N7B9 438 aa17.52■□□□□ 0.4
SGCB-201ENST00000381431 SPOCK2Q92563 424 aa17.52■□□□□ 0.4
SGCB-201ENST00000381431 CPXM1Q96SM3 734 aa17.52■□□□□ 0.4
SGCB-201ENST00000381431 SYTL2Q9HCH5 934 aa17.52■□□□□ 0.4
SGCB-201ENST00000381431 SLC17A7Q9P2U7 560 aa17.52■□□□□ 0.4
SGCB-201ENST00000381431 YDJCA8MPS7 323 aa17.52■□□□□ 0.39
SGCB-201ENST00000381431 ZNF862O60290 1169 aa17.52■□□□□ 0.39
SGCB-201ENST00000381431 RAG1P15918 1043 aa17.52■□□□□ 0.39
SGCB-201ENST00000381431 OR1E1P30953 314 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms