RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 C1orf112Q9NSG2 853 aa7.59□□□□□ -1.19
GPCPD1-201ENST00000379019 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.59□□□□□ -1.19
GPCPD1-201ENST00000379019 B4GALT5O43286 388 aa7.59□□□□□ -1.19
GPCPD1-201ENST00000379019 LYPLA2O95372 231 aa7.59□□□□□ -1.19
GPCPD1-201ENST00000379019 MAPTP10636 758 aaKnown RBP7.59□□□□□ -1.19
GPCPD1-201ENST00000379019 SKIP12755 728 aa7.59□□□□□ -1.19
GPCPD1-201ENST00000379019 CRABP2P29373 138 aa7.59□□□□□ -1.19
GPCPD1-201ENST00000379019 RXRGP48443 463 aa7.59□□□□□ -1.19
GPCPD1-201ENST00000379019 DEUP1Q05D60 604 aa7.59□□□□□ -1.19
GPCPD1-201ENST00000379019 MUM1Q2TAK8 710 aa7.59□□□□□ -1.19
GPCPD1-201ENST00000379019 SLC9B1Q4ZJI4 515 aa7.59□□□□□ -1.19
GPCPD1-201ENST00000379019 MROH9Q5TGP6 573 aa7.59□□□□□ -1.19
GPCPD1-201ENST00000379019 DNAJC14Q6Y2X3 702 aaPredicted RBP7.59□□□□□ -1.19
GPCPD1-201ENST00000379019 CYHR1Q6ZMK1 362 aa7.59□□□□□ -1.19
GPCPD1-201ENST00000379019 SNRNP27Q8WVK2 155 aaKnown RBP7.59□□□□□ -1.19
GPCPD1-201ENST00000379019 MFSD14AQ96MC6 490 aa7.59□□□□□ -1.19
GPCPD1-201ENST00000379019 MINDY3Q9H8M7 445 aa7.59□□□□□ -1.19
GPCPD1-201ENST00000379019 PDGFCQ9NRA1 345 aa7.59□□□□□ -1.19
GPCPD1-201ENST00000379019 ATP8B3O60423 1300 aa7.59□□□□□ -1.2
GPCPD1-201ENST00000379019 CCDC88CQ9P219 2028 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 GOLGA8TH3BQL2 631 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 H3BRB1 525 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 ERBB2P04626 1255 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 CHRNGP07510 517 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 FGF3P11487 239 aaPredicted RBP7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 ATP6V1B1P15313 513 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 L1CAMP32004 1257 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 PPP1R2P41236 205 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 CDK16Q00536 496 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 ANKRD34AQ69YU3 496 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 PGM2L1Q6PCE3 622 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 TEX9Q8N6V9 391 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 SLC29A1Q99808 456 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 C16orf70Q9BSU1 422 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 RAB34Q9BZG1 259 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 WDR55Q9H6Y2 383 aaPredicted RBP7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 CAB39LQ9H9S4 337 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 POPDC2Q9HBU9 364 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 ZNF148Q9UQR1 794 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 DOCK3Q8IZD9 2030 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 SDR42E2A6NKP2 422 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 A8MU76 341 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 RBP3P10745 1247 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 FGFR3P22607 806 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 FAM102BQ5T8I3 360 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 SEL1L2Q5TEA6 688 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 IER5Q5VY09 327 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 SPOCD1Q6ZMY3 1216 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 CACNG4Q9UBN1 327 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 CORINQ9Y5Q5 1042 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 E7ESA3 106 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 ABLIM1O14639 778 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 CST8O60676 142 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 POU5F1BQ06416 359 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 CALCOCO2Q13137 446 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 ATXN7L3BQ96GX2 97 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 PRICKLE1Q96MT3 831 aaPredicted RBP7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 FNBP1Q96RU3 617 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 INO80BQ9C086 356 aaPredicted RBP7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 LMAN2LQ9H0V9 348 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 METTL14Q9HCE5 456 aaKnown RBP7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 STRIP2Q9ULQ0 834 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 PCDHA10Q9Y5I2 948 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 BOD1L1Q8NFC6 3051 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 CCDC78A2IDD5 438 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 C9JVG2 144 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 LIN7AO14910 233 aaPredicted RBP7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 GYG2O15488 501 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 HOXA2O43364 376 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 HLA-DRAP01903 254 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 GRIA3P42263 894 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 EPHB1P54762 984 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 RPL10AP62906 217 aaKnown RBP7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 BBS9Q3SYG4 887 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 ZACNQ401N2 412 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 KLHDC10Q6PID8 442 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 LRRC8DQ7L1W4 858 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 TRIM50Q86XT4 487 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 ERMNQ8TAM6 284 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 CPB2Q96IY4 423 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 TARS2Q9BW92 718 aaKnown RBP7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 MAGED2Q9UNF1 606 aaPredicted RBP7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 A0A1B0GTL3 188 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 MIF4GDA9UHW6 222 aaKnown RBP7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 B4GAT1O43505 415 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 SNNO75324 88 aaPredicted RBP7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 STIP1P31948 543 aaKnown RBP7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 VHLP40337 213 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 YWHAZP63104 245 aaKnown RBP7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 ATP11AP98196 1134 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 GRM2Q14416 872 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 PITRM1Q5JRX3 1037 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 TEDDM1Q5T9Z0 273 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 CXCL17Q6UXB2 119 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 RNF169Q8NCN4 708 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 CCDC110Q8TBZ0 833 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 GAB3Q8WWW8 586 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 SLCO4A1Q96BD0 722 aa7.58□□□□□ -1.2
GPCPD1-201ENST00000379019 SLC39A3Q9BRY0 314 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms