RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 AFF2P51816 1311 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 A0A0G2JLW4 131 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 RHOCP08134 193 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 ITGALP20701 1170 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 MAGEA4P43358 317 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 PSME3P61289 254 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 BNIP2Q12982 314 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 MEA1Q16626 185 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 KCTD8Q6ZWB6 473 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 ZZZ3Q8IYH5 903 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 OR2W6PQ8NHA6 318 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 ZNF563Q8TA94 476 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 ATG10Q9H0Y0 220 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 ZCCHC17Q9NP64 241 aaKnown RBP13.56□□□□□ -0.24
HIPK3-202ENST00000379016 ADPRHL2Q9NX46 363 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 HAO1Q9UJM8 370 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 THRAP10827 490 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 HMGCS2P54868 508 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 EIF3MQ7L2H7 374 aaKnown RBP13.55□□□□□ -0.24
HIPK3-202ENST00000379016 TMEM68Q96MH6 324 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 PIH1D3Q9NQM4 214 aaKnown RBP13.55□□□□□ -0.24
HIPK3-202ENST00000379016 HEY2Q9UBP5 337 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.55□□□□□ -0.24
HIPK3-202ENST00000379016 H7C4K7 107 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 ATMINO43313 823 aaPredicted RBP13.55□□□□□ -0.24
HIPK3-202ENST00000379016 FSHRP23945 695 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 TCF7P36402 384 aaPredicted RBP13.55□□□□□ -0.24
HIPK3-202ENST00000379016 AP3M2P53677 418 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 EFEMP1Q12805 493 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 R3HDM1Q15032 1099 aaKnown RBP13.55□□□□□ -0.24
HIPK3-202ENST00000379016 EFCAB12Q6NXP0 572 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 EXOC3L1Q86VI1 746 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 SUGP1Q8IWZ8 645 aaKnown RBP13.55□□□□□ -0.24
HIPK3-202ENST00000379016 MEIOBQ8N635 442 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 LRRC17Q8N6Y2 441 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 OSBPL11Q9BXB4 747 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 GLP2RO95838 553 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 URODP06132 367 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 MTA1Q13330 715 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 SP140Q13342 867 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 SETMARQ53H47 684 aaPredicted RBP13.55□□□□□ -0.24
HIPK3-202ENST00000379016 OLFML1Q6UWY5 402 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 RNF180Q86T96 592 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 ELMO1Q92556 727 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 REPS1Q96D71 796 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 CCDC86Q9H6F5 360 aaKnown RBP13.55□□□□□ -0.24
HIPK3-202ENST00000379016 ANKDD1BA6NHY2 528 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 TDP2O95551 362 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 GEMIN4P57678 1058 aaKnown RBP13.55□□□□□ -0.24
HIPK3-202ENST00000379016 ORC1Q13415 861 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 SUSD4Q5VX71 490 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 IRGCQ6NXR0 463 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 CEP68Q76N32 757 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 CLHC1Q8NHS4 586 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 RFFLQ8WZ73 363 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 BATF3Q9NR55 127 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 AP4E1Q9UPM8 1137 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 A0A1W2PQ27 194 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 A0A1W2PQ64 194 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 A0A1W2PQD8 194 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 CRTAMO95727 393 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 FASP25445 335 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 MADCAM1Q13477 382 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 TRAPPC5Q8IUR0 188 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 SCUBE1Q8IWY4 988 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 CCDC36Q8IYA8 594 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 LNX2Q8N448 690 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 MAML3Q96JK9 1138 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 RNF145Q96MT1 663 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 ZNHIT2Q9UHR6 403 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 A0A088AWK7 358 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 KANSL1LA0AUZ9 987 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 PLIN3O60664 434 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 TOP3BO95985 862 aaKnown RBP13.55□□□□□ -0.24
HIPK3-202ENST00000379016 ZNF10P21506 573 aaPredicted RBP13.55□□□□□ -0.24
HIPK3-202ENST00000379016 EFNA5P52803 228 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 UBE3CQ15386 1083 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 INSCQ1MX18 579 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 CNSTQ6PJW8 725 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 STK32CQ86UX6 486 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 ZNF611Q8N823 705 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 SLC4A11Q8NBS3 891 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 FAM81AQ8TBF8 368 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 RERGQ96A58 199 aaPredicted RBP13.55□□□□□ -0.24
HIPK3-202ENST00000379016 CCDC126Q96EE4 140 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 VPS33BQ9H267 617 aa13.55□□□□□ -0.24
HIPK3-202ENST00000379016 ATXN2Q99700 1313 aaKnown RBP13.55□□□□□ -0.24
HIPK3-202ENST00000379016 TYMPP19971 482 aa13.54□□□□□ -0.24
HIPK3-202ENST00000379016 MSR1P21757 451 aa13.54□□□□□ -0.24
HIPK3-202ENST00000379016 ADD2P35612 726 aa13.54□□□□□ -0.24
HIPK3-202ENST00000379016 SLC7A2P52569 658 aa13.54□□□□□ -0.24
HIPK3-202ENST00000379016 VBP1P61758 197 aa13.54□□□□□ -0.24
HIPK3-202ENST00000379016 ZNF579Q8NAF0 562 aaKnown RBP13.54□□□□□ -0.24
HIPK3-202ENST00000379016 RAD54BQ9Y620 910 aa13.54□□□□□ -0.24
HIPK3-202ENST00000379016 IQGAP2Q13576 1575 aa13.54□□□□□ -0.24
HIPK3-202ENST00000379016 LGALS16A8MUM7 142 aa13.54□□□□□ -0.24
HIPK3-202ENST00000379016 CST8O60676 142 aa13.54□□□□□ -0.24
HIPK3-202ENST00000379016 QPRTQ15274 297 aa13.54□□□□□ -0.24
HIPK3-202ENST00000379016 ARMC10Q8N2F6 343 aa13.54□□□□□ -0.24
HIPK3-202ENST00000379016 FAM98AQ8NCA5 519 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms