RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 C3orf20Q8ND61 904 aa11.08□□□□□ -0.64
HIF3A-205ENST00000377670 FEZF2Q8TBJ5 459 aa11.08□□□□□ -0.64
HIF3A-205ENST00000377670 ZFYVE19Q96K21 471 aa11.08□□□□□ -0.64
HIF3A-205ENST00000377670 CYP3A43Q9HB55 503 aa11.08□□□□□ -0.64
HIF3A-205ENST00000377670 FANCEQ9HB96 536 aa11.08□□□□□ -0.64
HIF3A-205ENST00000377670 TMBIM4Q9HC24 238 aa11.08□□□□□ -0.64
HIF3A-205ENST00000377670 CISHQ9NSE2 258 aa11.08□□□□□ -0.64
HIF3A-205ENST00000377670 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.08□□□□□ -0.64
HIF3A-205ENST00000377670 ST3GAL5Q9UNP4 418 aa11.08□□□□□ -0.64
HIF3A-205ENST00000377670 ATRNO75882 1429 aa11.08□□□□□ -0.64
HIF3A-205ENST00000377670 INAVAQ3KP66 663 aa11.07□□□□□ -0.64
HIF3A-205ENST00000377670 TJAP1Q5JTD0 557 aa11.07□□□□□ -0.64
HIF3A-205ENST00000377670 WDR93Q6P2C0 686 aa11.07□□□□□ -0.64
HIF3A-205ENST00000377670 ARHGAP9Q9BRR9 750 aa11.07□□□□□ -0.64
HIF3A-205ENST00000377670 MRIQ9BWK5 157 aa11.07□□□□□ -0.64
HIF3A-205ENST00000377670 DNAJC18Q9H819 358 aa11.07□□□□□ -0.64
HIF3A-205ENST00000377670 TDRKHQ9Y2W6 561 aaKnown RBP11.07□□□□□ -0.64
HIF3A-205ENST00000377670 HES2Q9Y543 173 aa11.07□□□□□ -0.64
HIF3A-205ENST00000377670 V9GYQ6 96 aa11.07□□□□□ -0.64
HIF3A-205ENST00000377670 HSPA1AP0DMV8 641 aaKnown RBP11.07□□□□□ -0.64
HIF3A-205ENST00000377670 HSPA1BP0DMV9 641 aaKnown RBP11.07□□□□□ -0.64
HIF3A-205ENST00000377670 C1orf186Q6ZWK4 172 aa11.07□□□□□ -0.64
HIF3A-205ENST00000377670 VSIG10LQ86VR7 867 aa11.07□□□□□ -0.64
HIF3A-205ENST00000377670 ZNF677Q86XU0 584 aa11.07□□□□□ -0.64
HIF3A-205ENST00000377670 ZNF786Q8N393 782 aa11.07□□□□□ -0.64
HIF3A-205ENST00000377670 ZDHHC6Q9H6R6 413 aa11.07□□□□□ -0.64
HIF3A-205ENST00000377670 PDGFCQ9NRA1 345 aa11.07□□□□□ -0.64
HIF3A-205ENST00000377670 NSMCE4AQ9NXX6 385 aa11.07□□□□□ -0.64
HIF3A-205ENST00000377670 NT5C1B-RDH14C9J2C7 533 aa11.07□□□□□ -0.64
HIF3A-205ENST00000377670 OR1E1P30953 314 aa11.07□□□□□ -0.64
HIF3A-205ENST00000377670 USP10Q14694 798 aaKnown RBP11.07□□□□□ -0.64
HIF3A-205ENST00000377670 SGO1Q5FBB7 561 aa11.07□□□□□ -0.64
HIF3A-205ENST00000377670 SLFN11Q7Z7L1 901 aa11.07□□□□□ -0.64
HIF3A-205ENST00000377670 IL1RL2Q9HB29 575 aa11.07□□□□□ -0.64
HIF3A-205ENST00000377670 SYTL2Q9HCH5 934 aa11.07□□□□□ -0.64
HIF3A-205ENST00000377670 RGPD5Q99666 1765 aa11.07□□□□□ -0.64
HIF3A-205ENST00000377670 DUSP11O75319 330 aaKnown RBP11.07□□□□□ -0.64
HIF3A-205ENST00000377670 USP17L7P0C7H9 530 aa11.07□□□□□ -0.64
HIF3A-205ENST00000377670 FAM71DQ8N9W8 422 aa11.07□□□□□ -0.64
HIF3A-205ENST00000377670 E2F7Q96AV8 911 aa11.07□□□□□ -0.64
HIF3A-205ENST00000377670 DNAJC19Q96DA6 116 aa11.07□□□□□ -0.64
HIF3A-205ENST00000377670 GULP1Q9UBP9 304 aa11.07□□□□□ -0.64
HIF3A-205ENST00000377670 L1RE1Q9UN81 338 aa11.07□□□□□ -0.64
HIF3A-205ENST00000377670 ZSCAN5CA6NGD5 496 aaPredicted RBP11.07□□□□□ -0.64
HIF3A-205ENST00000377670 CCL16O15467 120 aa11.07□□□□□ -0.64
HIF3A-205ENST00000377670 TBC1D12O60347 775 aa11.07□□□□□ -0.64
HIF3A-205ENST00000377670 CRTAMO95727 393 aa11.07□□□□□ -0.64
HIF3A-205ENST00000377670 IL1BP01584 269 aa11.07□□□□□ -0.64
HIF3A-205ENST00000377670 FGRP09769 529 aa11.07□□□□□ -0.64
HIF3A-205ENST00000377670 EIF4BP23588 611 aaKnown RBP11.07□□□□□ -0.64
HIF3A-205ENST00000377670 CRYBB1P53674 252 aaPredicted RBP11.07□□□□□ -0.64
HIF3A-205ENST00000377670 MRNIPQ6NTE8 343 aa11.07□□□□□ -0.64
HIF3A-205ENST00000377670 LAYNQ6UX15 382 aa11.07□□□□□ -0.64
HIF3A-205ENST00000377670 GPR141Q7Z602 305 aa11.07□□□□□ -0.64
HIF3A-205ENST00000377670 ZSCAN18Q8TBC5 510 aaPredicted RBP11.07□□□□□ -0.64
HIF3A-205ENST00000377670 EDEM1Q92611 657 aa11.07□□□□□ -0.64
HIF3A-205ENST00000377670 CXorf40BQ96DE9 158 aa11.07□□□□□ -0.64
HIF3A-205ENST00000377670 TCF25Q9BQ70 676 aa11.07□□□□□ -0.64
HIF3A-205ENST00000377670 SIKE1Q9BRV8 207 aa11.07□□□□□ -0.64
HIF3A-205ENST00000377670 IL1RAPL1Q9NZN1 696 aa11.07□□□□□ -0.64
HIF3A-205ENST00000377670 RAMP2O60895 175 aa11.06□□□□□ -0.64
HIF3A-205ENST00000377670 RECQL4O94761 1208 aa11.06□□□□□ -0.64
HIF3A-205ENST00000377670 GTF2E2P29084 291 aaKnown RBP11.06□□□□□ -0.64
HIF3A-205ENST00000377670 CLK1P49759 484 aaKnown RBP11.06□□□□□ -0.64
HIF3A-205ENST00000377670 TTC39BQ5VTQ0 682 aaPredicted RBP11.06□□□□□ -0.64
HIF3A-205ENST00000377670 TASP1Q9H6P5 420 aa11.06□□□□□ -0.64
HIF3A-205ENST00000377670 HEY2Q9UBP5 337 aa11.06□□□□□ -0.64
HIF3A-205ENST00000377670 GMEB2Q9UKD1 530 aa11.06□□□□□ -0.64
HIF3A-205ENST00000377670 CFIP05156 583 aa11.06□□□□□ -0.64
HIF3A-205ENST00000377670 SPATA31C1P0DKV0 1188 aa11.06□□□□□ -0.64
HIF3A-205ENST00000377670 GPC1P35052 558 aa11.06□□□□□ -0.64
HIF3A-205ENST00000377670 PTGER2P43116 358 aa11.06□□□□□ -0.64
HIF3A-205ENST00000377670 COPAP53621 1224 aa11.06□□□□□ -0.64
HIF3A-205ENST00000377670 PPP3CAQ08209 521 aa11.06□□□□□ -0.64
HIF3A-205ENST00000377670 BOLA3Q53S33 107 aa11.06□□□□□ -0.64
HIF3A-205ENST00000377670 GPSM3Q9Y4H4 160 aa11.06□□□□□ -0.64
HIF3A-205ENST00000377670 VPS26AO75436 327 aa11.06□□□□□ -0.64
HIF3A-205ENST00000377670 ERN1O75460 977 aaKnown RBP11.06□□□□□ -0.64
HIF3A-205ENST00000377670 BDNFP23560 247 aa11.06□□□□□ -0.64
HIF3A-205ENST00000377670 ANXA11P50995 505 aaKnown RBP11.06□□□□□ -0.64
HIF3A-205ENST00000377670 ITGB3BPQ13352 177 aaPredicted RBP11.06□□□□□ -0.64
HIF3A-205ENST00000377670 GPR158Q5T848 1215 aa11.06□□□□□ -0.64
HIF3A-205ENST00000377670 CCDC81Q6ZN84 652 aa11.06□□□□□ -0.64
HIF3A-205ENST00000377670 KRT78Q8N1N4 520 aa11.06□□□□□ -0.64
HIF3A-205ENST00000377670 TFB1MQ8WVM0 346 aaKnown RBP11.06□□□□□ -0.64
HIF3A-205ENST00000377670 TNFRSF25Q93038 417 aa11.06□□□□□ -0.64
HIF3A-205ENST00000377670 SENP8Q96LD8 212 aa11.06□□□□□ -0.64
HIF3A-205ENST00000377670 KLHL25Q9H0H3 589 aa11.06□□□□□ -0.64
HIF3A-205ENST00000377670 POLMQ9NP87 494 aaPredicted RBP11.06□□□□□ -0.64
HIF3A-205ENST00000377670 ELOVL2Q9NXB9 296 aa11.06□□□□□ -0.64
HIF3A-205ENST00000377670 FRMPD4Q14CM0 1322 aa11.06□□□□□ -0.64
HIF3A-205ENST00000377670 PRR23D1E9PI22 279 aaPredicted RBP11.06□□□□□ -0.64
HIF3A-205ENST00000377670 PRR23D2P0DMB1 279 aaPredicted RBP11.06□□□□□ -0.64
HIF3A-205ENST00000377670 MYL2P10916 166 aa11.06□□□□□ -0.64
HIF3A-205ENST00000377670 ABCE1P61221 599 aaKnown RBP11.06□□□□□ -0.64
HIF3A-205ENST00000377670 BCL2L1Q07817 233 aa11.06□□□□□ -0.64
HIF3A-205ENST00000377670 GRSF1Q12849 480 aaKnown RBP eCLIP11.06□□□□□ -0.64
HIF3A-205ENST00000377670 DDX39BQ13838 428 aaKnown RBP11.06□□□□□ -0.64
HIF3A-205ENST00000377670 TCEA2Q15560 299 aa11.06□□□□□ -0.64
HIF3A-205ENST00000377670 INSCQ1MX18 579 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms