RNA–Protein interactions for RNA: ENST00000377617.7

ATXN2-201, Transcript of ataxin 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATXN2, Length 4,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-201ENST00000377617 MT-CO1P00395 513 aa17.1■□□□□ 0.33
ATXN2-201ENST00000377617 PRKAR1AP10644 381 aa17.1■□□□□ 0.33
ATXN2-201ENST00000377617 VCLP18206 1134 aa17.1■□□□□ 0.33
ATXN2-201ENST00000377617 ACLYP53396 1101 aa17.1■□□□□ 0.33
ATXN2-201ENST00000377617 FOXO4P98177 505 aa17.1■□□□□ 0.33
ATXN2-201ENST00000377617 PLA2G4FQ68DD2 849 aa17.1■□□□□ 0.33
ATXN2-201ENST00000377617 ZCCHC23Q6ZST2 131 aa17.1■□□□□ 0.33
ATXN2-201ENST00000377617 PCDH20Q8N6Y1 951 aaKnown RBP17.1■□□□□ 0.33
ATXN2-201ENST00000377617 TMC2Q8TDI7 906 aa17.1■□□□□ 0.33
ATXN2-201ENST00000377617 ISCA1Q9BUE6 129 aa17.1■□□□□ 0.33
ATXN2-201ENST00000377617 COMMD9Q9P000 198 aa17.1■□□□□ 0.33
ATXN2-201ENST00000377617 SRP68Q9UHB9 627 aaKnown RBP17.1■□□□□ 0.33
ATXN2-201ENST00000377617 COQ6Q9Y2Z9 468 aa17.1■□□□□ 0.33
ATXN2-201ENST00000377617 ERBB3P21860 1342 aa17.1■□□□□ 0.33
ATXN2-201ENST00000377617 SEPT12Q8IYM1 358 aa17.1■□□□□ 0.33
ATXN2-201ENST00000377617 LRRC71Q8N4P6 559 aa17.1■□□□□ 0.33
ATXN2-201ENST00000377617 GANCQ8TET4 914 aa17.1■□□□□ 0.33
ATXN2-201ENST00000377617 GPR63Q9BZJ6 419 aa17.1■□□□□ 0.33
ATXN2-201ENST00000377617 ZNF335Q9H4Z2 1342 aaPredicted RBP17.1■□□□□ 0.33
ATXN2-201ENST00000377617 NCAM2O15394 837 aa17.1■□□□□ 0.33
ATXN2-201ENST00000377617 DNAJB2P25686 324 aa17.1■□□□□ 0.33
ATXN2-201ENST00000377617 CHI3L1P36222 383 aaPredicted RBP17.1■□□□□ 0.33
ATXN2-201ENST00000377617 TROAPQ12815 778 aa17.1■□□□□ 0.33
ATXN2-201ENST00000377617 TSC22D1Q15714 1073 aa17.1■□□□□ 0.33
ATXN2-201ENST00000377617 LIN54Q6MZP7 749 aa17.1■□□□□ 0.33
ATXN2-201ENST00000377617 EIF3MQ7L2H7 374 aaKnown RBP17.1■□□□□ 0.33
ATXN2-201ENST00000377617 LDHDQ86WU2 507 aa17.1■□□□□ 0.33
ATXN2-201ENST00000377617 AP3S1Q92572 193 aa17.1■□□□□ 0.33
ATXN2-201ENST00000377617 USP18Q9UMW8 372 aa17.1■□□□□ 0.33
ATXN2-201ENST00000377617 MGAT4DA6NG13 374 aa17.09■□□□□ 0.33
ATXN2-201ENST00000377617 PIGNO95427 931 aa17.09■□□□□ 0.33
ATXN2-201ENST00000377617 PMF1Q6P1K2 205 aa17.09■□□□□ 0.33
ATXN2-201ENST00000377617 CHSY1Q86X52 802 aa17.09■□□□□ 0.33
ATXN2-201ENST00000377617 BAIAP2Q9UQB8 552 aa17.09■□□□□ 0.33
ATXN2-201ENST00000377617 C2orf81A6NN90 581 aa17.09■□□□□ 0.33
ATXN2-201ENST00000377617 DHFRP00374 187 aa17.09■□□□□ 0.33
ATXN2-201ENST00000377617 SERPIND1P05546 499 aa17.09■□□□□ 0.33
ATXN2-201ENST00000377617 AMPD2Q01433 879 aa17.09■□□□□ 0.33
ATXN2-201ENST00000377617 BST1Q10588 318 aa17.09■□□□□ 0.33
ATXN2-201ENST00000377617 ANKS6Q68DC2 871 aa17.09■□□□□ 0.33
ATXN2-201ENST00000377617 ADCK2Q7Z695 626 aa17.09■□□□□ 0.33
ATXN2-201ENST00000377617 SLCO6A1Q86UG4 719 aa17.09■□□□□ 0.33
ATXN2-201ENST00000377617 FAM47BQ8NA70 645 aa17.09■□□□□ 0.33
ATXN2-201ENST00000377617 CMTM6Q9NX76 183 aa17.09■□□□□ 0.33
ATXN2-201ENST00000377617 PFDN2Q9UHV9 154 aa17.09■□□□□ 0.33
ATXN2-201ENST00000377617 VANGL2Q9ULK5 521 aa17.09■□□□□ 0.33
ATXN2-201ENST00000377617 H3BMM5 538 aa17.09■□□□□ 0.33
ATXN2-201ENST00000377617 SSNA1O43805 119 aa17.09■□□□□ 0.33
ATXN2-201ENST00000377617 CD4P01730 458 aa17.09■□□□□ 0.33
ATXN2-201ENST00000377617 HOXB8P17481 243 aaPredicted RBP17.09■□□□□ 0.33
ATXN2-201ENST00000377617 PGAM1P18669 254 aa17.09■□□□□ 0.33
ATXN2-201ENST00000377617 STARP49675 285 aa17.09■□□□□ 0.33
ATXN2-201ENST00000377617 CDC42EP1Q00587 391 aa17.09■□□□□ 0.33
ATXN2-201ENST00000377617 SCARA3Q6AZY7 606 aa17.09■□□□□ 0.33
ATXN2-201ENST00000377617 FAM43BQ6ZT52 329 aaPredicted RBP17.09■□□□□ 0.33
ATXN2-201ENST00000377617 C11orf74Q86VG3 221 aa17.09■□□□□ 0.33
ATXN2-201ENST00000377617 TUBGCP5Q96RT8 1024 aa17.09■□□□□ 0.33
ATXN2-201ENST00000377617 S100A14Q9HCY8 104 aa17.09■□□□□ 0.33
ATXN2-201ENST00000377617 POLRMTO00411 1230 aaKnown RBP17.09■□□□□ 0.33
ATXN2-201ENST00000377617 AKAP3O75969 853 aa17.09■□□□□ 0.33
ATXN2-201ENST00000377617 HOXB6P17509 224 aaKnown RBP17.09■□□□□ 0.33
ATXN2-201ENST00000377617 GMFBP60983 142 aa17.09■□□□□ 0.33
ATXN2-201ENST00000377617 LSM3P62310 102 aaKnown RBP17.09■□□□□ 0.33
ATXN2-201ENST00000377617 SLC9A5Q14940 896 aa17.09■□□□□ 0.33
ATXN2-201ENST00000377617 QPCTQ16769 361 aa17.09■□□□□ 0.33
ATXN2-201ENST00000377617 SPANXN3Q5MJ09 141 aa17.09■□□□□ 0.33
ATXN2-201ENST00000377617 RAB43Q86YS6 212 aa17.09■□□□□ 0.33
ATXN2-201ENST00000377617 TTC30BQ8N4P2 665 aa17.09■□□□□ 0.33
ATXN2-201ENST00000377617 RBMX2Q9Y388 322 aaKnown RBP17.09■□□□□ 0.33
ATXN2-201ENST00000377617 CLDN25C9JDP6 229 aa17.08■□□□□ 0.33
ATXN2-201ENST00000377617 BIRC5O15392 142 aa17.08■□□□□ 0.33
ATXN2-201ENST00000377617 MAGEC1O60732 1142 aa17.08■□□□□ 0.33
ATXN2-201ENST00000377617 PRLP01236 227 aa17.08■□□□□ 0.33
ATXN2-201ENST00000377617 SNRPB2P08579 225 aaKnown RBP17.08■□□□□ 0.33
ATXN2-201ENST00000377617 RCVRNP35243 200 aa17.08■□□□□ 0.33
ATXN2-201ENST00000377617 TGFBR2P37173 567 aa17.08■□□□□ 0.33
ATXN2-201ENST00000377617 IREB2P48200 963 aaKnown RBP17.08■□□□□ 0.33
ATXN2-201ENST00000377617 GSCP56915 257 aaPredicted RBP17.08■□□□□ 0.33
ATXN2-201ENST00000377617 CDC16Q13042 620 aa17.08■□□□□ 0.33
ATXN2-201ENST00000377617 TTLL4Q14679 1199 aa17.08■□□□□ 0.33
ATXN2-201ENST00000377617 PGS1Q32NB8 556 aa17.08■□□□□ 0.33
ATXN2-201ENST00000377617 LEMD2Q8NC56 503 aa17.08■□□□□ 0.33
ATXN2-201ENST00000377617 ZNF540Q8NDQ6 660 aa17.08■□□□□ 0.33
ATXN2-201ENST00000377617 UBA3Q8TBC4 463 aa17.08■□□□□ 0.33
ATXN2-201ENST00000377617 TBCBQ99426 244 aa17.08■□□□□ 0.33
ATXN2-201ENST00000377617 SENP2Q9HC62 589 aa17.08■□□□□ 0.33
ATXN2-201ENST00000377617 SPEF1Q9Y4P9 236 aa17.08■□□□□ 0.33
ATXN2-201ENST00000377617 TMEM2Q9UHN6 1383 aa17.08■□□□□ 0.33
ATXN2-201ENST00000377617 F9P00740 461 aa17.08■□□□□ 0.32
ATXN2-201ENST00000377617 OLR1P78380 273 aa17.08■□□□□ 0.32
ATXN2-201ENST00000377617 ENPEPQ07075 957 aa17.08■□□□□ 0.32
ATXN2-201ENST00000377617 DUPD1Q68J44 220 aa17.08■□□□□ 0.32
ATXN2-201ENST00000377617 TIGD7Q6NT04 549 aaPredicted RBP17.08■□□□□ 0.32
ATXN2-201ENST00000377617 MCOLN2Q8IZK6 566 aa17.08■□□□□ 0.32
ATXN2-201ENST00000377617 DEPDC4Q8N2C3 294 aa17.08■□□□□ 0.32
ATXN2-201ENST00000377617 FNDC5Q8NAU1 212 aa17.08■□□□□ 0.32
ATXN2-201ENST00000377617 ACMSDQ8TDX5 336 aa17.08■□□□□ 0.32
ATXN2-201ENST00000377617 ZNF222Q9UK12 451 aa17.08■□□□□ 0.32
ATXN2-201ENST00000377617 GMPPBQ9Y5P6 360 aa17.08■□□□□ 0.32
ATXN2-201ENST00000377617 CPSF4O95639 269 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms