RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 UBQLN1Q9UMX0 589 aaKnown RBP12.74□□□□□ -0.37
VPS13A-204ENST00000376634 DNAJC13O75165 2243 aa12.74□□□□□ -0.37
VPS13A-204ENST00000376634 A0A0A6YYK5 440 aaPredicted RBP12.74□□□□□ -0.37
VPS13A-204ENST00000376634 MGRN1O60291 552 aa12.74□□□□□ -0.37
VPS13A-204ENST00000376634 RHOCP08134 193 aa12.74□□□□□ -0.37
VPS13A-204ENST00000376634 SLC2A4P14672 509 aa12.74□□□□□ -0.37
VPS13A-204ENST00000376634 CYP11B1P15538 503 aa12.74□□□□□ -0.37
VPS13A-204ENST00000376634 IRAK1P51617 712 aa12.74□□□□□ -0.37
VPS13A-204ENST00000376634 CCNIQ14094 377 aa12.74□□□□□ -0.37
VPS13A-204ENST00000376634 CTXN3Q4LDR2 81 aa12.74□□□□□ -0.37
VPS13A-204ENST00000376634 AGMOQ6ZNB7 445 aa12.74□□□□□ -0.37
VPS13A-204ENST00000376634 FAM172AQ8WUF8 416 aa12.74□□□□□ -0.37
VPS13A-204ENST00000376634 TARS2Q9BW92 718 aaKnown RBP12.74□□□□□ -0.37
VPS13A-204ENST00000376634 UGT2B28Q9BY64 529 aa12.74□□□□□ -0.37
VPS13A-204ENST00000376634 GANQ9H2C0 597 aa12.74□□□□□ -0.37
VPS13A-204ENST00000376634 FBXO44Q9H4M3 255 aa12.74□□□□□ -0.37
VPS13A-204ENST00000376634 COMMD9Q9P000 198 aa12.74□□□□□ -0.37
VPS13A-204ENST00000376634 LOC100506127A0A0U1RQW1 187 aa12.74□□□□□ -0.37
VPS13A-204ENST00000376634 NR3C2P08235 984 aa12.74□□□□□ -0.37
VPS13A-204ENST00000376634 POU6F1Q14863 301 aa12.74□□□□□ -0.37
VPS13A-204ENST00000376634 ZNF605Q86T29 641 aa12.74□□□□□ -0.37
VPS13A-204ENST00000376634 TMEM237Q96Q45 408 aa12.74□□□□□ -0.37
VPS13A-204ENST00000376634 ANAPC2Q9UJX6 822 aa12.74□□□□□ -0.37
VPS13A-204ENST00000376634 AP4E1Q9UPM8 1137 aa12.74□□□□□ -0.37
VPS13A-204ENST00000376634 SLC9A8Q9Y2E8 581 aa12.74□□□□□ -0.37
VPS13A-204ENST00000376634 BTBD3Q9Y2F9 522 aa12.74□□□□□ -0.37
VPS13A-204ENST00000376634 CCDC182A6NF36 153 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 PAN2Q504Q3 1202 aaKnown RBP12.73□□□□□ -0.37
VPS13A-204ENST00000376634 CBWD3Q5JTY5 395 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 CBWD5Q5RIA9 395 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 RACGAP1Q9H0H5 632 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 DPP7Q9UHL4 492 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 AXIN2Q9Y2T1 843 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 AKAP12Q02952 1782 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 KHDRBS3O75525 346 aaKnown RBP12.73□□□□□ -0.37
VPS13A-204ENST00000376634 OR6A2O95222 327 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 CYP2B6P20813 491 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 ZNF512BQ96KM6 892 aaPredicted RBP12.73□□□□□ -0.37
VPS13A-204ENST00000376634 RIT2Q99578 217 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 N6AMT1Q9Y5N5 214 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 PTPN3P26045 913 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 IL2P60568 153 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 COPZ1P61923 177 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 TIMM50Q3ZCQ8 353 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 IZUMO2Q6UXV1 221 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 SIX5Q8N196 739 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 SPPL2AQ8TCT8 520 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 EVA1BQ9NVM1 165 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 ARHGAP28Q9P2N2 729 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 TUBE1Q9UJT0 475 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 SCNN1BP51168 640 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 TRAF3Q13114 568 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 CCDC33Q8N5R6 958 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 MPP3Q13368 585 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 LIN54Q6MZP7 749 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 ARHGAP22Q7Z5H3 698 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 OR6Y1Q8NGX8 325 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 CASKIN2Q8WXE0 1202 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 FAM192AQ9GZU8 254 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 AGPAT3Q9NRZ7 376 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 ENDOD1O94919 500 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 PSMD4P55036 377 aaKnown RBP12.73□□□□□ -0.37
VPS13A-204ENST00000376634 OTUD3Q5T2D3 398 aaPredicted RBP12.73□□□□□ -0.37
VPS13A-204ENST00000376634 MZT2BQ6NZ67 158 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 NDOR1Q9UHB4 597 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 GTF3C4Q9UKN8 822 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 ACOT9Q9Y305 439 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 F8VZ95 297 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 SKIV2L2P42285 1042 aaKnown RBP12.73□□□□□ -0.37
VPS13A-204ENST00000376634 C21orf59P57076 290 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 RPTNQ6XPR3 784 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 DSG4Q86SJ6 1040 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 MAGEC3Q8TD91 643 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 DNAJC16Q9Y2G8 782 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 SVILO95425 2214 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 PHGDHO43175 533 aaKnown RBP12.73□□□□□ -0.37
VPS13A-204ENST00000376634 ACO1P21399 889 aaKnown RBP12.73□□□□□ -0.37
VPS13A-204ENST00000376634 CRABP2P29373 138 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 SCARA3Q6AZY7 606 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 PJA1Q8NG27 643 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 C9orf16Q9BUW7 83 aa12.73□□□□□ -0.37
VPS13A-204ENST00000376634 MED14O60244 1454 aa12.72□□□□□ -0.37
VPS13A-204ENST00000376634 IGKV5-2P06315 115 aa12.72□□□□□ -0.37
VPS13A-204ENST00000376634 FASTKQ14296 549 aaKnown RBP12.72□□□□□ -0.37
VPS13A-204ENST00000376634 GDPD5Q8WTR4 605 aa12.72□□□□□ -0.37
VPS13A-204ENST00000376634 CENPIQ92674 756 aaPredicted RBP12.72□□□□□ -0.37
VPS13A-204ENST00000376634 FBXL21Q9UKT6 434 aa12.72□□□□□ -0.37
VPS13A-204ENST00000376634 PON1P27169 355 aa12.72□□□□□ -0.37
VPS13A-204ENST00000376634 SETMARQ53H47 684 aaPredicted RBP12.72□□□□□ -0.37
VPS13A-204ENST00000376634 CPNE1Q99829 537 aa12.72□□□□□ -0.37
VPS13A-204ENST00000376634 THAP2Q9H0W7 228 aa12.72□□□□□ -0.37
VPS13A-204ENST00000376634 OTOFQ9HC10 1997 aa12.72□□□□□ -0.37
VPS13A-204ENST00000376634 A0A1W2PRG6 482 aa12.72□□□□□ -0.37
VPS13A-204ENST00000376634 ACSL4O60488 711 aa12.72□□□□□ -0.37
VPS13A-204ENST00000376634 BOP1Q14137 746 aaKnown RBP12.72□□□□□ -0.37
VPS13A-204ENST00000376634 PKN1Q16512 942 aa12.72□□□□□ -0.37
VPS13A-204ENST00000376634 TMC2Q8TDI7 906 aa12.72□□□□□ -0.37
VPS13A-204ENST00000376634 FAM84BQ96KN1 310 aaPredicted RBP12.72□□□□□ -0.37
VPS13A-204ENST00000376634 PLA2R1Q13018 1463 aa12.72□□□□□ -0.37
VPS13A-204ENST00000376634 CAMK1Q14012 370 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms