RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 ELK3P41970 407 aa12.97□□□□□ -0.33
CLCN6-206ENST00000376496 ARL4CP56559 192 aa12.97□□□□□ -0.33
CLCN6-206ENST00000376496 WASHC5Q12768 1159 aa12.97□□□□□ -0.33
CLCN6-206ENST00000376496 XRCC4Q13426 336 aa12.97□□□□□ -0.33
CLCN6-206ENST00000376496 SPARCL1Q14515 664 aa12.97□□□□□ -0.33
CLCN6-206ENST00000376496 HOOK3Q86VS8 718 aa12.97□□□□□ -0.33
CLCN6-206ENST00000376496 USP33Q8TEY7 942 aa12.97□□□□□ -0.33
CLCN6-206ENST00000376496 PYROXD1Q8WU10 500 aa12.97□□□□□ -0.33
CLCN6-206ENST00000376496 TMEM169Q96HH4 297 aa12.97□□□□□ -0.33
CLCN6-206ENST00000376496 ZNF558Q96NG5 402 aa12.97□□□□□ -0.33
CLCN6-206ENST00000376496 YME1L1Q96TA2 773 aa12.97□□□□□ -0.33
CLCN6-206ENST00000376496 HS3ST4Q9Y661 456 aa12.97□□□□□ -0.33
CLCN6-206ENST00000376496 COL4A4P53420 1690 aaPredicted RBP12.97□□□□□ -0.33
CLCN6-206ENST00000376496 ABHD14A-ACY1A0A1B0GW23 586 aa12.97□□□□□ -0.33
CLCN6-206ENST00000376496 CFAP69A5D8W1 941 aa12.97□□□□□ -0.33
CLCN6-206ENST00000376496 ALOX15BO15296 676 aa12.97□□□□□ -0.33
CLCN6-206ENST00000376496 EFEMP2O95967 443 aa12.97□□□□□ -0.33
CLCN6-206ENST00000376496 PRKD1Q15139 912 aaPredicted RBP12.97□□□□□ -0.33
CLCN6-206ENST00000376496 PIK3R6Q5UE93 754 aa12.97□□□□□ -0.33
CLCN6-206ENST00000376496 SLC39A11Q8N1S5 342 aa12.97□□□□□ -0.33
CLCN6-206ENST00000376496 SERPINB12Q96P63 405 aa12.97□□□□□ -0.33
CLCN6-206ENST00000376496 TSPYL1Q9H0U9 437 aa12.97□□□□□ -0.33
CLCN6-206ENST00000376496 CYP4F11Q9HBI6 524 aa12.97□□□□□ -0.33
CLCN6-206ENST00000376496 VANGL2Q9ULK5 521 aa12.97□□□□□ -0.33
CLCN6-206ENST00000376496 GREB1Q4ZG55 1949 aa12.97□□□□□ -0.33
CLCN6-206ENST00000376496 PDE4DIPQ5VU43 2346 aa12.97□□□□□ -0.33
CLCN6-206ENST00000376496 MYO7AQ13402 2215 aa12.96□□□□□ -0.33
CLCN6-206ENST00000376496 DFFAO00273 331 aa12.96□□□□□ -0.33
CLCN6-206ENST00000376496 SCAMP3O14828 347 aaKnown RBP12.96□□□□□ -0.33
CLCN6-206ENST00000376496 PSMB4P28070 264 aa12.96□□□□□ -0.33
CLCN6-206ENST00000376496 TBX4P57082 545 aa12.96□□□□□ -0.33
CLCN6-206ENST00000376496 GNGT1P63211 74 aa12.96□□□□□ -0.33
CLCN6-206ENST00000376496 CRADDP78560 199 aa12.96□□□□□ -0.33
CLCN6-206ENST00000376496 ARTNQ5T4W7 220 aa12.96□□□□□ -0.33
CLCN6-206ENST00000376496 SLC8B1Q6J4K2 584 aa12.96□□□□□ -0.33
CLCN6-206ENST00000376496 MFSD5Q6N075 450 aa12.96□□□□□ -0.33
CLCN6-206ENST00000376496 ZNF771Q7L3S4 317 aaPredicted RBP12.96□□□□□ -0.33
CLCN6-206ENST00000376496 TFAP2DQ7Z6R9 452 aa12.96□□□□□ -0.33
CLCN6-206ENST00000376496 CIR1Q86X95 450 aaPredicted RBP12.96□□□□□ -0.33
CLCN6-206ENST00000376496 PDIK1LQ8N165 341 aa12.96□□□□□ -0.33
CLCN6-206ENST00000376496 ZNF567Q8N184 647 aa12.96□□□□□ -0.33
CLCN6-206ENST00000376496 MPP5Q8N3R9 675 aa12.96□□□□□ -0.33
CLCN6-206ENST00000376496 COLGALT1Q8NBJ5 622 aa12.96□□□□□ -0.33
CLCN6-206ENST00000376496 AGAP3Q96P47 875 aa12.96□□□□□ -0.33
CLCN6-206ENST00000376496 RC3H2Q9HBD1 1191 aaKnown RBP12.96□□□□□ -0.33
CLCN6-206ENST00000376496 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.96□□□□□ -0.33
CLCN6-206ENST00000376496 CXXC1Q9P0U4 656 aaPredicted RBP12.96□□□□□ -0.33
CLCN6-206ENST00000376496 ZMYND8Q9ULU4 1186 aaPredicted RBP12.96□□□□□ -0.33
CLCN6-206ENST00000376496 SLC12A8A0AV02 714 aa12.96□□□□□ -0.33
CLCN6-206ENST00000376496 E7EVH7 732 aa12.96□□□□□ -0.33
CLCN6-206ENST00000376496 GCATO75600 419 aa12.96□□□□□ -0.33
CLCN6-206ENST00000376496 TUBP50607 506 aa12.96□□□□□ -0.33
CLCN6-206ENST00000376496 AIF1P55008 147 aa12.96□□□□□ -0.33
CLCN6-206ENST00000376496 PDK1Q15118 436 aa12.96□□□□□ -0.33
CLCN6-206ENST00000376496 AGBL2Q5U5Z8 902 aa12.96□□□□□ -0.33
CLCN6-206ENST00000376496 CAND1Q86VP6 1230 aaKnown RBP12.96□□□□□ -0.33
CLCN6-206ENST00000376496 RNF168Q8IYW5 571 aaPredicted RBP12.96□□□□□ -0.33
CLCN6-206ENST00000376496 VPS52Q8N1B4 723 aa12.96□□□□□ -0.33
CLCN6-206ENST00000376496 PDCD7Q8N8D1 485 aaKnown RBP12.96□□□□□ -0.33
CLCN6-206ENST00000376496 TLCD1Q96CP7 247 aa12.96□□□□□ -0.33
CLCN6-206ENST00000376496 MYEOVQ96EZ4 313 aa12.96□□□□□ -0.33
CLCN6-206ENST00000376496 CFAP36Q96G28 342 aa12.96□□□□□ -0.33
CLCN6-206ENST00000376496 SELENOSQ9BQE4 189 aa12.96□□□□□ -0.33
CLCN6-206ENST00000376496 TMEM106CQ9BVX2 250 aa12.96□□□□□ -0.33
CLCN6-206ENST00000376496 KLC2Q9H0B6 622 aa12.96□□□□□ -0.33
CLCN6-206ENST00000376496 RANBP2P49792 3224 aaKnown RBP12.96□□□□□ -0.34
CLCN6-206ENST00000376496 CDH23Q9H251 3354 aa12.96□□□□□ -0.34
CLCN6-206ENST00000376496 PLXNA3P51805 1871 aa12.96□□□□□ -0.34
CLCN6-206ENST00000376496 A0A0A0MRY4 1105 aa12.95□□□□□ -0.34
CLCN6-206ENST00000376496 GOLGA6L7A0A1B0GV03 622 aa12.95□□□□□ -0.34
CLCN6-206ENST00000376496 USP12O75317 370 aa12.95□□□□□ -0.34
CLCN6-206ENST00000376496 HSPA1AP0DMV8 641 aaKnown RBP12.95□□□□□ -0.34
CLCN6-206ENST00000376496 HSPA1BP0DMV9 641 aaKnown RBP12.95□□□□□ -0.34
CLCN6-206ENST00000376496 GCAP28676 217 aa12.95□□□□□ -0.34
CLCN6-206ENST00000376496 ZBTB17Q13105 803 aa12.95□□□□□ -0.34
CLCN6-206ENST00000376496 PID1Q7Z2X4 250 aa12.95□□□□□ -0.34
CLCN6-206ENST00000376496 SPATA13Q96N96 652 aa12.95□□□□□ -0.34
CLCN6-206ENST00000376496 CAPS2Q9BXY5 557 aa12.95□□□□□ -0.34
CLCN6-206ENST00000376496 IL37Q9NZH6 218 aa12.95□□□□□ -0.34
CLCN6-206ENST00000376496 MARCH2Q9P0N8 246 aa12.95□□□□□ -0.34
CLCN6-206ENST00000376496 LTBP2Q14767 1821 aa12.95□□□□□ -0.34
CLCN6-206ENST00000376496 PTPRSQ13332 1948 aa12.95□□□□□ -0.34
CLCN6-206ENST00000376496 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.95□□□□□ -0.34
CLCN6-206ENST00000376496 EXOC1LA0A1B0GW35 172 aa12.95□□□□□ -0.34
CLCN6-206ENST00000376496 C5orf60A6NFR6 353 aa12.95□□□□□ -0.34
CLCN6-206ENST00000376496 KCNU1A8MYU2 1149 aa12.95□□□□□ -0.34
CLCN6-206ENST00000376496 KIAA0355O15063 1070 aa12.95□□□□□ -0.34
CLCN6-206ENST00000376496 SOD2P04179 222 aa12.95□□□□□ -0.34
CLCN6-206ENST00000376496 KCNQ1P51787 676 aa12.95□□□□□ -0.34
CLCN6-206ENST00000376496 KDM7AQ6ZMT4 941 aa12.95□□□□□ -0.34
CLCN6-206ENST00000376496 C3orf62Q6ZUJ4 267 aa12.95□□□□□ -0.34
CLCN6-206ENST00000376496 ZNF534Q76KX8 674 aa12.95□□□□□ -0.34
CLCN6-206ENST00000376496 RELL1Q8IUW5 271 aa12.95□□□□□ -0.34
CLCN6-206ENST00000376496 ANKLE1Q8NAG6 615 aa12.95□□□□□ -0.34
CLCN6-206ENST00000376496 TTC16Q8NEE8 873 aa12.95□□□□□ -0.34
CLCN6-206ENST00000376496 BADQ92934 168 aa12.95□□□□□ -0.34
CLCN6-206ENST00000376496 ZNF512Q96ME7 567 aaPredicted RBP12.95□□□□□ -0.34
CLCN6-206ENST00000376496 SERPINB11Q96P15 392 aa12.95□□□□□ -0.34
CLCN6-206ENST00000376496 TRIM62Q9BVG3 475 aa12.95□□□□□ -0.34
CLCN6-206ENST00000376496 TLR8Q9NR97 1041 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms