RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 CA9Q16790 459 aa11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 SLC9B1Q4ZJI4 515 aa11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 LILRA2Q8N149 483 aa11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 PQLC1Q8N2U9 271 aa11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 GSDMBQ8TAX9 411 aa11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 ABTB1Q969K4 478 aaPredicted RBP11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 NACC2Q96BF6 587 aa11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 LIN28AQ9H9Z2 209 aaKnown RBP11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 SLC38A10Q9HBR0 1119 aa11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 SCHIP1Q9P0W5 487 aaPredicted RBP11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 DENRO43583 198 aaKnown RBP11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 FAM189A1O60320 539 aa11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 PLIN3O60664 434 aa11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 CCDC80Q76M96 950 aa11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 CDR2LQ86X02 465 aaPredicted RBP11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 GALNT4Q8N4A0 578 aa11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 NETO2Q8NC67 525 aa11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 UBA3Q8TBC4 463 aa11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 ADAM32Q8TC27 787 aa11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 SNRNP27Q8WVK2 155 aaKnown RBP11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 CLMNQ96JQ2 1002 aa11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 RNF157Q96PX1 679 aa11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 BTBD9Q96Q07 612 aa11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 EBNA1BP2Q99848 306 aaKnown RBP11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 COPS7BQ9H9Q2 264 aaPredicted RBP11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 TMEM216Q9P0N5 145 aa11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 BTBD7Q9P203 1132 aa11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 ZNF70Q9UC06 446 aaPredicted RBP11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 AP4B1Q9Y6B7 739 aa11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 WDR27A2RRH5 827 aa11.81□□□□□ -0.52
TM9SF2-201ENST00000376387 PRSS47A8MTI9 375 aa11.81□□□□□ -0.52
TM9SF2-201ENST00000376387 AIM2O14862 343 aa11.81□□□□□ -0.52
TM9SF2-201ENST00000376387 PEX1O43933 1283 aa11.81□□□□□ -0.52
TM9SF2-201ENST00000376387 ENDOD1O94919 500 aa11.81□□□□□ -0.52
TM9SF2-201ENST00000376387 ZBED1O96006 694 aa11.81□□□□□ -0.52
TM9SF2-201ENST00000376387 PSAPP07602 524 aa11.81□□□□□ -0.52
TM9SF2-201ENST00000376387 NR3C2P08235 984 aa11.81□□□□□ -0.52
TM9SF2-201ENST00000376387 SRGAP2CP0DJJ0 459 aa11.81□□□□□ -0.52
TM9SF2-201ENST00000376387 SRGAP2BP0DMP2 458 aa11.81□□□□□ -0.52
TM9SF2-201ENST00000376387 SERPINB5P36952 375 aa11.81□□□□□ -0.52
TM9SF2-201ENST00000376387 EMP3P54852 163 aa11.81□□□□□ -0.52
TM9SF2-201ENST00000376387 ITGA9Q13797 1035 aa11.81□□□□□ -0.52
TM9SF2-201ENST00000376387 CNGA3Q16281 694 aa11.81□□□□□ -0.52
TM9SF2-201ENST00000376387 ZNF699Q32M78 642 aa11.81□□□□□ -0.52
TM9SF2-201ENST00000376387 FAM102AQ5T9C2 384 aaPredicted RBP11.81□□□□□ -0.52
TM9SF2-201ENST00000376387 VSIG10LQ86VR7 867 aa11.81□□□□□ -0.52
TM9SF2-201ENST00000376387 TNS4Q8IZW8 715 aa11.81□□□□□ -0.52
TM9SF2-201ENST00000376387 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.81□□□□□ -0.52
TM9SF2-201ENST00000376387 FNIP1Q8TF40 1166 aa11.81□□□□□ -0.52
TM9SF2-201ENST00000376387 XYLT2Q9H1B5 865 aa11.81□□□□□ -0.52
TM9SF2-201ENST00000376387 JPH1Q9HDC5 661 aaPredicted RBP11.81□□□□□ -0.52
TM9SF2-201ENST00000376387 GOLGA8QA0A0J9YX86 632 aa11.81□□□□□ -0.52
TM9SF2-201ENST00000376387 GOLGA8OA6NCC3 632 aa11.81□□□□□ -0.52
TM9SF2-201ENST00000376387 GOLGA8NF8WBI6 632 aa11.81□□□□□ -0.52
TM9SF2-201ENST00000376387 HOXA2O43364 376 aa11.81□□□□□ -0.52
TM9SF2-201ENST00000376387 DGKIO75912 1065 aa11.81□□□□□ -0.52
TM9SF2-201ENST00000376387 NELFEP18615 380 aaKnown RBP11.81□□□□□ -0.52
TM9SF2-201ENST00000376387 POLR2BP30876 1174 aaKnown RBP11.81□□□□□ -0.52
TM9SF2-201ENST00000376387 FKBP1AP62942 108 aaKnown RBP11.81□□□□□ -0.52
TM9SF2-201ENST00000376387 SP2Q02086 613 aa11.81□□□□□ -0.52
TM9SF2-201ENST00000376387 GHRHRQ02643 423 aa11.81□□□□□ -0.52
TM9SF2-201ENST00000376387 SLFN12LQ6IEE8 588 aa11.81□□□□□ -0.52
TM9SF2-201ENST00000376387 SCYL2Q6P3W7 929 aa11.81□□□□□ -0.52
TM9SF2-201ENST00000376387 AMIGO2Q86SJ2 522 aa11.81□□□□□ -0.52
TM9SF2-201ENST00000376387 ZNF781Q8N8C0 355 aa11.81□□□□□ -0.52
TM9SF2-201ENST00000376387 CEP70Q8NHQ1 597 aa11.81□□□□□ -0.52
TM9SF2-201ENST00000376387 GAB3Q8WWW8 586 aa11.81□□□□□ -0.52
TM9SF2-201ENST00000376387 CMTM5Q96DZ9 223 aa11.81□□□□□ -0.52
TM9SF2-201ENST00000376387 ZNF668Q96K58 619 aaPredicted RBP11.81□□□□□ -0.52
TM9SF2-201ENST00000376387 LENG8Q96PV6 779 aaPredicted RBP11.81□□□□□ -0.52
TM9SF2-201ENST00000376387 OR52B2Q96RD2 323 aa11.81□□□□□ -0.52
TM9SF2-201ENST00000376387 PORCNQ9H237 461 aa11.81□□□□□ -0.52
TM9SF2-201ENST00000376387 NRDE2Q9H7Z3 1164 aa11.81□□□□□ -0.52
TM9SF2-201ENST00000376387 MYO18AQ92614 2054 aaKnown RBP11.81□□□□□ -0.52
TM9SF2-201ENST00000376387 TRPA1O75762 1119 aa11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 PIGRP01833 764 aa11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 PKNOX1P55347 436 aa11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 TRPC3Q13507 836 aa11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 ACAP1Q15027 740 aa11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 ABHD15Q6UXT9 468 aa11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 NAPRTQ6XQN6 538 aa11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 BRSK2Q8IWQ3 736 aa11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 SLC7A5P1Q8MH63 180 aa11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 PCDH19Q8TAB3 1148 aa11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 RIN3Q8TB24 985 aa11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 GRIN3AQ8TCU5 1115 aa11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 FAM151AQ8WW52 585 aa11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 ADPGKQ9BRR6 497 aa11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 KLC2Q9H0B6 622 aa11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 COG4Q9H9E3 785 aa11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 XPNPEP3Q9NQH7 507 aa11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 TMOD2Q9NZR1 351 aa11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 PSMD13Q9UNM6 376 aa11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 RAD17O75943 681 aa11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 AMHP03971 560 aa11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 ATP5BP06576 529 aaKnown RBP11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 XRCC1P18887 633 aaPredicted RBP11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 MAGEA3P43357 314 aa11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 KLF10Q13118 480 aa11.8□□□□□ -0.52
TM9SF2-201ENST00000376387 TMED1Q13445 227 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms